| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,751,537 | 0 | A | C | 33.3% | 100.6 / 10.0 | 55 | V111G (GTT→GGT) | yiaT | outer membrane protein YiaT |
| Reads supporting (aligned to +/- strand): ref base A (28/8); new base C (0/18); total (28/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AACTTGCCAGACCGCTACGACGGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGCC > NC_000913/3751310‑3751779 | acttggcaaacccGCTAGGAGGGGCCTCCCTCTCTGAAAGCCCATAATAATAGTCCCGAAAATTCTCGTAATAATAGAGACCGCCCAGCGAGGGTGTCGCCGACAGACGCCCTATCTGCATTTTGTGGAATCCCGATACCCCCCCCCCCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GTTTTCCCGGT‑CCCC‑AACCGCTCGGGGTGATACC‑GGGCACCCCCCGCCATAGCCGTACTATCa < 2:106551/240‑1 (MQ=255) aCTTGCCAGACCTCAACGACGGGACTCCCCCTCAAAAACGCCATAGAAATAGCCACGGAATTTCCCGACATAATAGAGACCCCCCAGCGGGGGTGTCGGCGACAGACGCCCTATCTGCATTTTGTGGAATCCCGATAGCCCCCCCCCCCAGCCGTGGCT‑TTTACCCAGACCG‑CCCGCAGCTGCAGAG‑GCTTTCCCGGTCCCCC‑ACC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCAc < 2:34230/251‑1 (MQ=255) ccGCTACGACGGGACTCACTCTCTGAAATGCCAAAGAAATAGTCACTAAAATTCTCTTCATAATAGAGACCGCCCAGCGCGGGTGTCAGCGAAAGACGACCTATCTGCATTTTGGGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑TTTATCCAGACCG‑TCCGCAGCTGCAGAG‑GCTTCCCCGGTTCCCC‑AAC‑GCTCGTGGTGATCCC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAg < 1:204629/251‑1 (MQ=255) acgacgGGACTCACTCTCTGAAATGCAATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACCCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGACGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATCGCCGTACTATCACGCTTATCAAGCTGtt > 1:693904/1‑251 (MQ=255) acgacgGGACTCACTCTCTAAAATGCCATAGTAATAGTCCCTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCCCCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCCCGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGt < 1:520091/250‑1 (MQ=255) aacgcggcactcatccgatGAAATCCCATAGGAATAGTCACTGAACTTCTCGTCAGAAAAGAGAACGCCCAGCGGAGGTGTCAGCAACAGTCGACTTCTCTGATTTTTGTGAAATCCCGAGAGCCCCCCCCCCCAGCCGT‑GCTTGTAATCCAGATCG‑TCCGCAGCTCCAGAG‑TCTTCCACGTTCCCCC‑AAC‑GCTTGTGGTGATACC‑GTGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGt < 2:398495/232‑1 (MQ=255) gacgGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGc > 2:694502/1‑251 (MQ=255) gacgGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGc > 2:577027/1‑251 (MQ=255) gacgGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGc > 1:282521/1‑251 (MQ=255) gggACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑GAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATg > 2:746468/1‑251 (MQ=255) gACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCCGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGc > 2:425428/1‑251 (MQ=255) gACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGc > 2:11103/1‑251 (MQ=255) ccctctctGAAATGCCATAGTAATAGTCACTGAAATTCTCTTCATAATAGAGACCCCCCAGCGCAGGTGTCAGCGACAGACGACCTTTCTGCATTTTGTGGAATCCCGATATCTCCCCCCCCCAGCCGTTGCT‑TTTACCCAGAACG‑CCCGCAGCTGCAGAG‑GCTTTCCCGTTCCCCC‑ACC‑GCTCGTGGTGATCCC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCAt < 1:673652/247‑1 (MQ=255) cactcTCTAAAATGCCATAGAAATAGTCACTGAAATTCTCGTCATAATAGAGACCGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCCCCCACCCGTTGCT‑TTTATCCAGAACG‑CCCGCAGCTGCAGAG‑GCTTTCACGTTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATaa < 1:297015/251‑1 (MQ=255) ctaaaaTGCCATAGTAATAGTCACTAAAATTCTCGTCATAATAGAGACCGCCCAGCGCAGGTGCCAGCAACAGACGCCCTATCTTCTTTTTGTGGAATACCAATACCCCCCCCCCCCAGCCTTTGCT‑TTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGt < 1:103365/246‑1 (MQ=255) ctGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGAGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTc > 2:766821/1‑250 (MQ=255) gAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCAtt > 1:747868/1‑251 (MQ=255) aaaTGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCAtt > 2:393718/1‑250 (MQ=255) cATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGt > 1:82884/1‑250 (MQ=255) cATAGTAATAGTCACTGAAATTCTCGGCATAATAGAGAACGCCCAGCGCAGGAGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGCGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGt > 2:470899/1‑250 (MQ=255) tAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTa > 2:231438/1‑240 (MQ=255) aaagaggcatggattttCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCTTTTTGTGGAATCCCGATCGCTCCCCCCCCCAGCGTTTGCT‑GTTACCCAGACCT‑TCCGCAGCTGCGGAG‑GCTTCCACGGTTCCCC‑AAC‑GCTCGTGGTTATCCC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTTTTGCATGGCATAATCGTCATTa < 1:231438/225‑1 (MQ=255) gAAATTCTCGTCAAAATAGAGACCGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGACCG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATCCC‑AGGAAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAg < 1:740499/249‑1 (MQ=255) ttCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCCGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACAGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAACCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGTCAt > 2:484396/1‑251 (MQ=255) ttCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCAt > 1:250988/1‑251 (MQ=255) cATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGAt > 1:702220/1‑251 (MQ=255) aaaaagagagAACCCCCAGCGCTGGTGTCAGGAACAGCCGACCTATCTGCTTTTTGTGAAACCCCGATACCCCCCCCCCCCACCCGTTGCT‑GTTTTCCAGACCG‑CCCGCACCTGCAGAG‑GCTTTCCCGTTCCCCC‑ACC‑GCTCGTGGTAATACC‑AGACACCCCCCGCCATAGCTGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGAt < 2:594753/245‑1 (MQ=255) aaaaggagaACGCCCAGCGCGGGTGTCCGCGACGGACCACCTGTTTGCATTTTGGGGAATCCGGAGGGCTCCCCCCCCCAGCCGTTTCT‑GTTAACCA‑AACGGTCCGCAGCGGAAGAG‑GTTTTCCCGGTCCCCC‑ACC‑GCTCGTGGTGATACC‑GGGCAGCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGc < 2:568951/246‑1 (MQ=255) ataGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCgg > 1:182922/1‑251 (MQ=255) cccAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGATGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTAAAATTCCAGCGGCATCCAGGATGAGGTTAGGCTa > 2:102342/1‑249 (MQ=255) aGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTc > 2:324641/1‑251 (MQ=255) cgcgggTGTCGGCGCCAGACGACCTATCGGCTTTTTGTGGAATCCCGATAGCTCCCCCCCCCAGCCGTTGTT‑GTTACCCATACCG‑CCCGCAGCTGCAGTG‑GCTTTCACGTTCCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCAt < 1:425428/247‑1 (MQ=255) cgacaggcgtcccaccTGCTTTTTGTGGAATCCCGAAACCTCCCCCCCCCGGCGGTTGGG‑GTTGTCGAGATCC‑TCCGCAGCTGAAGGG‑GCTTTCACGGTCCCCC‑AAC‑CCTCGTTGT‑ATACCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCAcgtt < 1:387708/236‑4 (MQ=255) aGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCg > 1:17028/1‑250 (MQ=255) cgcccTATCTGCATTTGGTGGAATACCGATAGCTCCCCCCCCCACCCGTTGCT‑GTTATCCAGACCG‑TCCGCAGCGGCAGGG‑GCTTTCCCGGTTCCCC‑ACC‑GCTCGTGGTAATCCC‑AGCCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAg < 1:185229/248‑1 (MQ=255) atctgctgtttGGGGAATACCGAAAGCCCCCCCACCCAGCCGTTGCT‑GTTATCAAGAACC‑TCCGCAGCGGCAGAG‑GCTTTCACGCTCCCCC‑AAC‑GCTCGGGGTGAAACC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATaa < 1:314530/242‑1 (MQ=255) ggAATACCGATAGCTCCCCCCCCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCCCGGTCCCCC‑AAC‑GCTCGTGGTGATCCC‑AGCCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTc < 1:304143/251‑1 (MQ=255) cGATCGCTCCCCCCCCCAGCCGTTCGT‑GTTATCCAGACCG‑CCCGCGGCTGCAGAG‑GTTTTCACGGTCCCCC‑ACC‑GCTCGGGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGaa < 1:470899/251‑1 (MQ=255) gATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAAc > 2:735782/1‑251 (MQ=255) aaTAGCCCCCCCCCCCAGCCGTTCCG‑GTTAGCCAGAACC‑TCCGCCGTTGCAGAG‑TTTTTCGCGTTTCCCC‑ACC‑GCTCGGGGTGATACC‑CGCCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATGTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAAc < 1:324641/250‑1 (MQ=255) ccccccccgCCGTTGCT‑CTTATCCAGACCT‑TCCGCATCT‑CA‑AGCGCTTTCCCCGTTCCCCCAAC‑TCGCGTGGTGATCCC‑AGCCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAgn < 2:363763/243‑2 (MQ=255) cccccaGCCGTTCCT‑CTTACCAAGAGCG‑CCCGCCGCTGCAGAG‑TCTTTCCCGTTCCCCC‑AAC‑GCTCGGTGTATTACG‑CGGCCCCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTAt < 2:133115/249‑1 (MQ=255) cccccgCCGTTGCT‑TTTATCCAGACCG‑CCCGCAGCGGCAGAG‑GCTT‑CCCCGTTCCCC‑AACCGCTGGTGTTACTACC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATc < 2:403807/246‑1 (MQ=255) acccaGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATc > 1:34296/1‑251 (MQ=255) ccaGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATc > 1:403807/1‑249 (MQ=255) gTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCAt > 2:259638/1‑251 (MQ=255) cacgaacatgaaggctttttCACGTTTCCCC‑AAC‑GATGGTTGAAATCCC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCGCCTTCATAACTAATCAGCGGAATTGc < 2:718461/234‑1 (MQ=255) gCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCAtt > 1:753442/1‑251 (MQ=255) cTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCg > 2:561125/1‑134 (MQ=255) cTTTCACGGTCCCCC‑AAC‑GCTCGTGGTGATCCC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGTATCCAGGATGCg < 1:561125/134‑1 (MQ=255) ccccaacgcggtgggtgATACC‑GGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATa < 2:250988/238‑1 (MQ=255) accgcgcGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGc < 1:577027/245‑1 (MQ=255) gggtgATACC‑AGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGCGATTCAtt < 2:753442/250‑1 (MQ=255) aCC‑AGCCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGcc > 2:154819/1‑251 (MQ=255) cAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTAt > 1:61548/1‑207 (MQ=255) | AACTTGCCAGACCGCTACGACGGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCGACAGACGACCTATCTGCATTTTGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCT‑GTTATCCAGAACG‑TCCGCAGCTGCAGAG‑GCTTTCACGGTTCCCC‑AAC‑GCTCGTGGTGATACC‑AGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGCC > NC_000913/3751310‑3751779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |