| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,984,441 | 0 | A | C | 32.8% | 146.9 / 10.2 | 67 | G384G (GGT→GGG) | yqeF | putative acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (40/5); new base C (0/22); total (40/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.98e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATAAAGGGATGATATGCCCATGGGCTAGGGTTTTCAATTAAAAATAAAACAATGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACG > NC_000913/2984193‑2984689 | ataAAGGGATGATATGCCCATGGGCTAGGGTTTTCAATTAAAAATAAAACAATGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACAcc > 1:769185/1‑251 (MQ=255) aaaGGGATGATATGCCCATGGGCTAGGGTTTTCAATTAAAAATAAAACAATGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATAATTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑t < 1:151319/251‑1 (MQ=255) gatgatATGCCCATGGGCTAGGGTTTTCAATTAAAAATAAAACAATGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGccc < 1:735259/251‑1 (MQ=255) cATGGGCTAGGGTTTTCAATTAAAAATAAAACAATGTTTCATTTTTAAGTTAAGGATTAAAAAAAGGGCAGTGTCGATCACGAATATGTCAAGAGAATGGAAAAATGAGGGCGC‑CCAGAAAATG‑AATGTCGGCTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGGTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATaa > 1:104421/1‑249 (MQ=255) aTGGGCTAGGGTTTTCAATTAAAAATAAAACAATGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACa > 2:129557/1‑250 (MQ=255) ggTTTTCAATTAAAAATAAAACAATGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCAATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAACCGTTGcc > 2:660618/1‑251 (MQ=255) aaaaaaaaaaaaaaaaaaATTTTTCATTTTAAAGTAAAGGATAAAAAAAAGTGAAGTGTCGAACACGAATATGTTATGAGAATGAAAAAGGGAGGGAGC‑CCAGAAATTG‑GTGGTCGCCTTGCCCCCCATCATTATGCAACAGATAAAGGACGGCATATATTTAGCGGAAGGGAAAAAAGGC‑AGATCTTTTCGTCACGTCA‑AATGGCA‑AAC‑CCCCCCCCC‑GGGCCCCCGCCGATACAAAGCGTTGCCAGTcc < 2:169984/245‑1 (MQ=255) aaataaaaaaaaaaaCAATTTTTCATTTTTAAGTTAAGGATAAAAAAAAGTGCAGTGTCGACCAATAATATGTCATGAGAATAGAAAAAGGAGGGAGC‑CAAAAAAATG‑TTTGTCGTCTTGCCACCCATAATTATTCAACAAATTAATGACGGAAGATTTTTAT‑GGGGAGGGGGAAAAGCCAGAGCTTTTCGTCACTTTC‑AATGCTC‑AAT‑GCCCCCCCC‑GGGCCCCCGCCGATACAAAGCGTTGCCAGTCCt < 2:93429/246‑1 (MQ=255) aataaaaaaaaaaaCAATGTTTAATTTTTAAGTTAAGGATAAAAAAAAGGGAAGTGTAAATCACAAATATGTAATAAAAATGGAAAAAGGAGGGCGC‑CAAAAAAATG‑TATGTCTACTGGCCAGCCATCATTATTCAACAGATAAAGGACGGAAGATATTTATGGGAAAGGAGAAAAGGC‑AGAGCTTTTCGTCACTTTA‑AAGGGTA‑AAT‑CCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCtt < 1:755575/247‑1 (MQ=255) aaTTAAAAATAAAACAATGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAGATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCtt > 2:681832/1‑251 (MQ=255) aaaaCAATGTTTCATTTTTAAGTAAAGGATAAAAAAAAGGGCAGTGTCGAACAAAAATTTGTCATGAAAATGGAAAAATGAGGGAGC‑CAAAAAAATG‑TATGTCGATTTGCCAGCCATCATTATTCAAAAGATAAATGCCGGCAGATTTTTATCGGTAGGGAGAAAATGA‑AGACCTTTTCGTCCCTTTC‑ATTGGTC‑AAT‑CCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCAtt < 1:43130/251‑1 (MQ=255) aaTGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGtt > 2:677571/1‑251 (MQ=255) aTGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGttt > 1:629344/1‑251 (MQ=255) cATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAGAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCccgcc < 2:194130/206‑1 (MQ=255) cATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAGAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCccgcc > 1:194130/1‑206 (MQ=255) tttttAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCAttt > 1:76782/1‑251 (MQ=255) aaagtaaagGATAAAAAAAAGTGCAGTGTCGATAACAAATATGTCAGGAGAATGAAAAAATGAGGGACC‑CCAAAAAATG‑TATGTCGACTTGCCACCCAACATTATTCAACAGATAAAGGCGGGAATATATTTATCGGAAAGGAGAAAATGC‑AGAGTTATTCGTCACTTTA‑AATGGCA‑AAT‑CCCACCCCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCAt < 1:60698/249‑1 (MQ=255) aaagaaaaaaaaaaaGGGCAGTGTCGAACGCGAATATGTGAGGAAAAAGAAAAAAGGAGGGAGC‑CAAAAAAATG‑GATGTCGATTTGCCAGCCATCTTTATTAAACAAATAAAGGGCGACAGATATTTATGGGAAAGAAGAAAAGGC‑AAAGTTTTTCGTCAGTTTC‑AGGGGTC‑ATT‑CCCACCCCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAAcc < 1:433936/242‑1 (MQ=255) tAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAAc > 2:658190/1‑251 (MQ=255) aaaaaaaaGTGAAGTGTAGACCAAAAATTGGTCATGAGAATGAAAAAAGGAGGGAGC‑CAAAAAAATG‑TATGTCGACTTGCCAGCCATCATTATAAAAAAAATAAATGAGGGCAGATTTTTATGGGAAAGGAGGAAATGC‑AGAGCTTTTCGTCACGTTC‑AATGG‑C‑AATTCCCCCCCCC‑GGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGaaa < 1:581468/249‑1 (MQ=255) aaaaaGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGG‑AGC‑CCAGAAAATG‑TATGTCGAATTTCCCACCATCATTATTCAAACGATTAATGACGGGAGGTATTTTTCGGGAAAGAGGAAATTC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCAAACCCCTGCCCCCCGC‑GATACAAAGCGTTGCCAATCCTTTGCGGGCATTACGGTTCACCCTTTCATGAACCagaggaaaca > 1:478263/1‑243 (MQ=255) gTGCGGTGTCAACCACAAATATGTCATGAGAA‑GGAAAAAAG‑GGGGGCGCCAAAAAATGGTATGTCGACTTGCCAGCCATCATTATACAAAAGATTAGTGACGGAAGTTATTGATCGGAAAGGAGAAAAGGC‑AGAGCTTTTCGTCCCGTTC‑ATTGTTC‑AAT‑CCCCCACCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTc < 2:160313/251‑1 (MQ=255) gagtgcagaccacaaaTATGTCATGAAAAGGAAAAAATGGGGGAGC‑CAAAAAAATG‑TAGGGCGCCTTGCCCGCCATATTTTTTCAACAAATTAAGGACGGAATATATTTAGCGATAAGGAGAAAATGC‑AGAGCTTTCCGCCACGTTA‑AATGCCC‑AAT‑GCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGc < 2:65493/237‑1 (MQ=255) tgtCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAAc > 1:501534/1‑251 (MQ=255) tgtCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAAc > 2:473309/1‑251 (MQ=255) gtagaaccgaaatatttaaagagaAGGGAAAAAGGAGGGAGC‑CAAAAAAATG‑TATGTCGACTGGCAAACAATCATTATTAAACAGATGAATGACGTCAAATTTTTAACGGAAAGGAGAAAATGA‑AGATCTTTTCGTCACGTTA‑AATGGTC‑AAG‑CCCCCCCCC‑TGTCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAAcc < 2:589851/231‑1 (MQ=255) gtCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAAcc > 2:133294/1‑251 (MQ=255) cACGAATATGTCGTGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGTATTCGGCAACCGGAAgc > 1:558495/1‑251 (MQ=255) aTGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCAcc > 2:79809/1‑198 (MQ=255) tGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGCGTGCGATcgc > 1:141141/1‑251 (MQ=255) gAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGccac > 2:331793/1‑251 (MQ=255) gAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACcatt > 1:572614/1‑248 (MQ=255) aaaaTG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAgc > 2:11395/1‑211 (MQ=255) aaaTG‑TATGTCTCGTTGCCCTCCATCTTTATTCAACAGAGTAAGGAGGGAAATTTTTTATCGGTAGGGAAAAAATGC‑AGATTTTTTCGTCA‑TTTCTAATGTTC‑AAT‑CCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACcattgacat < 1:614183/251‑1 (MQ=255) aaaTG‑GATGTCGTCTTGACAGCAATTATTATTCAACAGATTAAGGGCGGAAGATATTTAGGGGAAGGGAGAAAATGC‑AGAGTTTTTCGTCACTTTC‑AAGGGTC‑AAT‑GCCCCCCCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACcattgacat < 2:629344/251‑1 (MQ=255) tCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCTGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGAc > 2:553270/1‑251 (MQ=255) cGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGAcc > 1:154235/1‑250 (MQ=255) ccagccaTCATTATACAAAAGATAAATGACGGCATATTTTTATGGATAAGGAGAAAATGC‑AGAGCTTTTCGTCCCGTTC‑ATGGGAC‑ACT‑CCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATcc < 2:76782/251‑1 (MQ=255) agccaTCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATccc > 1:726759/1‑250 (MQ=255) acccaTCATTATTCAACAAATAAATGCCGGCAGTTATTTTGCGGTAAGGAGAAATTGC‑AAAGCTTTTCGCCCCGTT‑‑AAAGGTCCACT‑CCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCa < 1:726192/249‑1 (MQ=255) ccaTCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGTAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTTACCCGACGCTCATCCCAcc > 2:172528/1‑250 (MQ=255) ccaTCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACACGACGCTCATCCCACt > 1:316922/1‑251 (MQ=255) attattCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGc > 1:664438/1‑251 (MQ=255) cAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTg > 1:775593/1‑251 (MQ=255) acagttaaaggccGGCATATATTTACGGGTAGGGGGGAAATGC‑AGGGTTTTTCGCCTCTTTA‑AATGGTC‑AAT‑GCCCCCCCC‑GGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGcc < 1:660618/239‑1 (MQ=255) aCAGATAAATGACGGAAGATTTTTATGGGTAAGGAGAAAAGGA‑AGAGTTATTCGTCCCGTTA‑AGTGGTA‑AAT‑CCCACCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGcc < 1:473309/251‑1 (MQ=255) gATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGc > 1:305174/1‑247 (MQ=255) aTTAATGACGGCAGATATTTATCGGTAAGGAGCAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAAcc > 1:636248/1‑251 (MQ=255) aTTAATGACGGCAGATATTTATCGGAAAGGAGAAATTGC‑AGAGCTATTCGTCACGTTA‑AAGGGTA‑AAT‑GCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAAcc < 1:396818/251‑1 (MQ=255) aaggACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGGTTTTTTCTTCACTTCC‑AATGGTC‑AAC‑GCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGaa < 1:615049/248‑1 (MQ=255) aaTGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGa > 1:163259/1‑250 (MQ=255) tGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGaa > 1:92444/1‑249 (MQ=255) gACGGAAGATATTTATCGGAAAGGAGGAAAGGC‑AGAGCTATTCGTCACGTCA‑AATGGTC‑AAT‑GCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAgc < 1:157186/251‑1 (MQ=255) ggCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACCAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGcc > 2:332500/1‑251 (MQ=255) cAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGCAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCtg > 2:527273/1‑251 (MQ=255) aGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACACAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCtgt > 2:299562/1‑251 (MQ=255) atatTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTgc > 2:134018/1‑251 (MQ=255) tttATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTgcagc > 2:317785/1‑251 (MQ=255) tttATCGGTAAGGAGGAAATGA‑AGAGCTATTCGTCACGTTA‑AATGGTC‑ACT‑GCCCCACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTgcag < 1:331793/250‑1 (MQ=255) aTCGGTAAGGAGGAAATGC‑AGAGCTATTCGCCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCCTGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGAAGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCaa > 1:228959/1‑250 (MQ=255) ggTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGc > 1:723687/1‑251 (MQ=255) gaaaggagaaaagggagcgCTATTCGTCCCGTTA‑AATGGAC‑AAA‑GCCACCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGCGCAGCAAACGCt < 1:553143/233‑1 (MQ=255) ggaggaAATGC‑AGAGCTTTTCGTCTCGTTC‑AATGGCC‑ATT‑CCCACCCCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCAt < 1:403644/251‑1 (MQ=255) cc‑AGAGCTATTCATCACTTTC‑ATTGGAC‑AAC‑CCCCCCCCC‑TGCCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCTATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTc < 1:28620/248‑1 (MQ=255) ttCGTCACGTTC‑AATGGTC‑AAT‑GCCACAACC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCg > 2:774873/1‑250 (MQ=255) cACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTc > 2:240053/1‑250 (MQ=255) ccccgttaatgggtaaaT‑GCCCCCCCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTc < 1:658190/236‑1 (MQ=255) acacCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTc > 2:374307/1‑230 (MQ=255) acCC‑TGACCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACg > 1:673298/1‑249 (MQ=255) | ATAAAGGGATGATATGCCCATGGGCTAGGGTTTTCAATTAAAAATAAAACAATGTTTCATTTTTAAGTTAAGGATTAAAAAAAGTGCAGTGTCGATCACGAATATGTCATGAGAATGGAAAAATGAGGGAGC‑CCAGAAAATG‑TATGTCGACTTGCCAGCCATCATTATTCAACAGATTAATGACGGCAGATATTTATCGGTAAGGAGGAAATGC‑AGAGCTATTCGTCACGTTC‑AATGGTC‑AAT‑GCCACACCC‑TGGCCCCCGCCGATACAAAGCGTTGCCAGTCCTTTGCGGGCATTACGTTTCACCATTTCATGAACCAGAGAAACCAGGATTCGGCAACCGGAAGCGCCTATCGGGTGACCGAGTGCGATCGCGCCACCATTGACATTGACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACG > NC_000913/2984193‑2984689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |