| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 501,557 | 0 | A | C | 32.8% | 144.0 / 10.4 | 61 | intergenic (+128/+5) | gsk/ybaL | inosine/guanosine kinase/putative transporter YbaL |
| Reads supporting (aligned to +/- strand): ref base A (37/4); new base C (0/20); total (37/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.70e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCAGGTGTGTAAATATGCTAACCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGC > NC_000913/501309‑501795 | gcAGGTGTGTAAATATGCTAACCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAaccacc < 1:457023/251‑1 (MQ=255) aGGTGTGTAAATATGCTAACCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑Gt < 1:723910/251‑1 (MQ=255) aaaTATGCTAACCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTAcccc < 1:79187/250‑1 (MQ=255) aaTATGCTAACCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGt < 1:408888/251‑1 (MQ=255) gCTAACCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTcacc > 1:303189/1‑250 (MQ=255) aCCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTc > 2:181920/1‑251 (MQ=255) gAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAGGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACccgcc < 1:193698/251‑1 (MQ=255) aTCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATAGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTgg > 2:86352/1‑251 (MQ=255) ttccccTCGTTAACCGCGCGGTTTGCGGGGGCGTAAAGAGAGCGTGAAAGGGTCTAACGGGGATCTTTAATTTATGGT‑GGTTCGGAGGGCCAGA‑AAGGCCTTTCCCGCCGCTTCTGGCTTTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCTTCTTTTCTTGCCTACTTTTTTTTC‑ATATTTGACACCCGGCACCCCCC‑GTTTCCCCCGTCACCCCCACACCCGCCGGTGGCGTTTCCAGCAGTTCCAg < 2:571678/246‑1 (MQ=255) ccccTCGTTTACCGCGCGGTTTCCCGGGGGGTGAAGACGGCCTGGAGGTGTCTTACTGGGTTCTTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAGGGC‑TTTCCCGCCGCTTCGGGCATTTGGC‑TCTGGATGCCTGATGCGCCGCTGGCGCTTCTTACCTTGCCTACATTTTTTTC‑ATATTTTACACCCGGAACCCCCC‑GTTTACCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCAt < 1:740707/249‑1 (MQ=255) tAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGc > 2:211631/1‑251 (MQ=255) cTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGc > 1:661893/1‑251 (MQ=255) cGGAGCGTGAATACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATAGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCCACCACC‑GTTTACCCCGTCACAACCTCACCCGCCGGTGGCGTTTCCCGCAGTTCCAGCATCGTACGGGCGATTTCAcgcccgcc > 2:458907/1‑251 (MQ=255) cGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGcc > 1:350829/1‑251 (MQ=255) gTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCAc > 2:431725/1‑251 (MQ=255) agaagaccgctggaaagatttttACGGGGATGGTAAATTTATCGGCGTTTCGGAGG‑CCAGAAAGGGC‑GTTCCCGCCGCATCTGGC‑TTTGGCCTCTCTATCCCTGATGCGACGCGGGCGCGTCTTATCATGCCTACATTTTTTTC‑ATTTTTTACACCCGGCACCCCCC‑GTTTCCCCCGTCACCACCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACt < 2:189730/230‑1 (MQ=255) gACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCt > 2:168472/1‑251 (MQ=255) agcaggAAGAGTTTTACGGGGATCGTTAAGTTATCGTCGTTTCGTAGG‑CCAGAAAAGGC‑GTTCCCGCCGCATCTGGTTTTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACACCCGGCAACCCCC‑GTTTACCCCGTCCCCCCCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGAtt < 1:43024/247‑1 (MQ=255) gtGGGATGGTTAATTTATCGTGGGTTGGTGGG‑CAAGATAAGGC‑GTTCCCGCCGCATCTGGCTTTGGGC‑TCTCGTGGCTTGATGCGACGCGGGCGGTTTTTATCATGCCTAAATATTTTTC‑ATATTTTCCACCCGGCAACCCCC‑TTTTCCCCCGTCCCCCCCCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGt < 1:755151/249‑1 (MQ=255) gggATCGTTACGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGat > 2:598062/1‑251 (MQ=255) gggATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGat > 1:231691/1‑251 (MQ=255) tttAAGTTAGCTTCTGTTCGTAGG‑CCAGATAAGGC‑TTCCCCCCCGCTTCTGGCTTTTGTC‑TCTCGATGCCTGATGCGACGCTGGCGCGTTTTATCAGCCCTACATTTTTTTC‑ATTTTTTACACCCGCCAACCCCC‑TTTTCCCCCGTCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACg < 1:257713/249‑1 (MQ=255) cgcgggTTCGTGGG‑CCAGAAAGGGC‑GTTCCCGCCGCATCTGGATTTTGCC‑TCCCGATGCCTGATGCGCCGCGGGCGCGTTTTATCATCCCTACATTTTTTTC‑ATTTTTTACATCCGGCAACCCCC‑GTTTACCCCGTCCCCACCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCg < 1:698925/247‑1 (MQ=255) gtcgGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGt > 2:21576/1‑251 (MQ=255) gtcgGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGACATACGCCACTTCATCGt > 2:149016/1‑251 (MQ=255) tcgGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTc > 1:614850/1‑251 (MQ=255) ggTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCAt > 2:13776/1‑251 (MQ=255) ttCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATa > 1:76887/1‑250 (MQ=255) cGTAGC‑CCAGATAGGGC‑GTTCCCGCGGCATCTGGCTTTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCTTCTTATCATGCCTACATATTTTTC‑ATATTTTACACCCGGCACCCCCC‑GTTTCCCCCGCCACCCCCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAAt < 1:13776/250‑1 (MQ=255) cgg‑CCAGATAAGGC‑TTTCCCGCCCCACCTCGCTTTTGGC‑TCCTGAGGCCTGATGCGCCGCTGGCGCGTCTTATCTCCCCTA‑ATTTTTTTCCATATTTGACACCCGGCATCCCCC‑GTTTACCCCGCCACCACCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgc < 1:680791/250‑1 (MQ=255) ttccccccgcATCTGGCATTTGCC‑TCTCGTTGCCTGAGGCGACGCGGGCGCGTCTTATCAGGCCTACATTTTTTTC‑ATATTTAACA‑CCCGCAACCCCCCGTTTCCCCCGCCACCACCCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAAtc < 1:598062/243‑1 (MQ=255) gccgcATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTcc > 1:661327/1‑133 (MQ=255) ccccATCTGGCATTTGGC‑TCTCGATGCCTGATGCGCCGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCCCC‑TTTTCCCCCGTCACCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATc < 1:571985/248‑1 (MQ=255) cTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGAtt > 1:392301/1‑251 (MQ=255) ggCATTTGGC‑TCTCGATGCCTGAGGCGCCGCTGGCGCGTTTTATCATCCCTACTTTTTTTTC‑ATATTTTACATCCGGCACCCCCC‑TTTCCCCCCGTCCCCCCCCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGAtttt < 1:289091/251‑1 (MQ=255) gCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGAttttt > 2:442453/1‑251 (MQ=255) aTTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATgg > 1:294539/1‑217 (MQ=255) tttGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTcgc > 1:789181/1‑251 (MQ=255) ggC‑TCTCGATGCCTGATGCGGCGCTGGCGCGTTTTATCTTGCCTACATTTTTTTC‑ATATTTTCCACCCGGCACCCCCC‑TTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTcgcgc < 1:211631/250‑1 (MQ=255) c‑tctCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCggg > 1:69691/1‑251 (MQ=255) nctcGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGc > 2:344356/2‑251 (MQ=255) gATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGc > 1:636176/1‑247 (MQ=255) cccTGATGCGACGCTGGCGCTTGTTATCATGCCTACTTTTTTTTA‑ATTTTTCCCGCCCGCCACCCCCC‑GTTTCCCCCGCCACCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGcn < 2:350829/250‑2 (MQ=255) gATGCGCCGCTGGCGCCTCTTCTCTTGCCTACTTTTTTTAC‑ATATTTTACATCCGCCAACCCCC‑GTTCCCCCCGCCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCcac < 2:76887/249‑1 (MQ=255) atgccccGCTGGCGTGTTTTATCATCCCTACTTTTTTTTC‑ATATTTTCCCCCCGCCACCCCCC‑GTTTCCCCCGTCACCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAAt < 2:47537/245‑1 (MQ=255) gCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAAtct > 1:433514/1‑251 (MQ=255) gACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAAtctc > 2:703752/1‑250 (MQ=255) cGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCAcc > 2:37465/1‑251 (MQ=255) gCTGGCGCGTCTTACCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCAccc > 1:488314/1‑251 (MQ=255) cTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCg > 2:787114/1‑251 (MQ=255) gcgcGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAAtc > 2:735941/1‑241 (MQ=255) gcttcttctCATGCCTATATATTTTTA‑ATATTTACCACCCGACACCCCCC‑GTTTCCCCCGTCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCa < 2:69691/248‑1 (MQ=255) gTCTTATCATGACTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGAGGAGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATACTCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCATCCGCTTCAt > 1:148550/1‑250 (MQ=255) aTCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGt > 1:308338/1‑251 (MQ=255) ccTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGa > 1:401330/1‑250 (MQ=255) catttttttC‑ATATTTTACACCCGGCAACCCCC‑GTTTACCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGt < 1:168472/247‑1 (MQ=255) atTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTc > 1:182773/1‑249 (MQ=255) tttC‑ATTTTTTCCACCCGGCACCCCCC‑GTTTCCCCCGCCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGa < 1:431725/250‑1 (MQ=255) catattttccccccGGCACCCCCC‑GTTTCCCCCGCCCCCCCCCCTCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCa < 1:37465/238‑1 (MQ=255) tatTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGcc > 1:161182/1‑251 (MQ=255) atTTTACATCCGTCAACCACC‑GTTTACTACGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGCCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGCATCGTCCGGATCAGcc > 2:397505/1‑250 (MQ=255) aTCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGc > 1:700535/1‑250 (MQ=255) | GCAGGTGTGTAAATATGCTAACCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGG‑CCAGATAAGGC‑GTTCACGCCGCATCTGGCATTTGGC‑TCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACC‑GTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGC > NC_000913/501309‑501795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |