| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,336,901 | 0 | T | A | 35.6% | 70.9 / 20.8 | 45 | Y44F (TAT→TTT) | adiC | arginine:agmatine antiporter |
| Reads supporting (aligned to +/- strand): ref base T (25/4); new base A (0/16); total (25/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.49e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GATGGTTAATACCAATGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCGTTATTAATATAGCTCT > NC_000913/4336651‑4337151 | gATGGTTAATACCAATGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAAcc‑atccat > 1:144144/1‑251 (MQ=255)gATGGTTAATACCAATGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAAcc‑atccat < 1:455444/251‑1 (MQ=255) aaTGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATccc < 1:65983/251‑1 (MQ=255) aTGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCg < 1:83120/251‑1 (MQ=255) gaaaaaattAACTAAAATACCCTCCGCCAATGCCCCCCATGG‑GATTATTGCCGACCCAGCGGGCCAGCCAGTAGAGGACGTTGTTTTGATAACCGAGAAACGGGCAAAAGCAGCGGCGGGCGTAAGCGTAAGACCCCCCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑CCCGATAATCGTCACCACCC‑AACCAAAAATGGCAATCCCGCCAGTAGAGGCCAGGttt < 1:468046/243‑1 (MQ=255) aagaagTAACTTAAATATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGc > 1:572875/1‑251 (MQ=255) agaagTAACTTAAATATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGc > 1:774893/1‑250 (MQ=255) cataaatctcccacgcaaagccccaccaTGGCGAT‑ATCGCAGATCAAAGGGCCCAGCCGGTAGAGGTCGTGGGTTTGATAACCGAGAAGCGGGCCAAGGCGGGGGCGGGCGTAGGCGTAAGAACCACCAGGATTTGGGT‑CAAGGAACGACTTTTTGGCGTAACCC‑ATCGAGCGCCCCAGTGC‑ACCAATAACCGTCCCCAACC‑ATCAAAAAAGGGCACCCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAg < 2:29609/229‑1 (MQ=255) aaTATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCCCCAAAC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGaaa > 1:741028/1‑250 (MQ=255) aaTATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGaaa > 2:577193/1‑250 (MQ=255) atCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGCGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGCACGACATTTTGGCGTATACC‑ATCCAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATTGCAATCCCGCCAGTAGAGGCCAGGCTTGCAGGTAACAGAAAAac > 1:750613/1‑250 (MQ=255) gATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAggg > 1:785506/1‑251 (MQ=255) ngccagccaGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGGAACAAAAAAACACCTGACCCCAAAATATTTCCCGACACCCTCAAGGTTACgggg > 2:344473/2‑250 (MQ=255) agtaggggccgtggttttaaaaaCCGAGAAAGGGGCAAAAGCGGCGGGGGGGGTAAGCGAAAGACCCCCCAGGACTGGGGC‑CGAGGAACGACATTTTGGAGTATCCC‑AGCGAGAGCCCCA‑TGCCACCGAAAAGCGTCCCCACCC‑ACCCAAAAAGGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGccc < 2:137193/230‑1 (MQ=255) tGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGCGACGGGGATTAAGCCCACTTTGTGagc > 2:758694/1‑250 (MQ=255) cGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGGGACGGGGATTAAGCCCACTTTGGGAGAATCAGCATCCGa > 2:42558/1‑250 (MQ=255) ccgatcggcggcggcgGGCGTAAGCGTAAAAACCACCAGGACTGGGGC‑CGAGGAACGAAATTTTGGCGTATCCC‑ACCGAGACCCCCAGTGC‑ACCGATAATCGCCACCAACC‑ACCCAAAAAGGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAAt < 1:760022/240‑1 (MQ=255) gcaaaggcggcggcgGGCGAAAGCGGAAAACCCCCCAGGACTTGGGT‑CGAGGAACGACATTTGGGCGTATACC‑ATCGGGACCCCCGGTGC‑CCGGAAAATCGGC‑CCAACCCATCAAAAAAGGGCACTCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTa < 2:741028/242‑1 (MQ=255) aaaGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAAc > 1:242150/1‑251 (MQ=255) aaGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACt > 1:756475/1‑251 (MQ=255) agcagcGGCGGGCATAAGCGAAAGAACCACCAGGACGGGGGT‑CGAGGAACGACATTTTGGCGAATACC‑ATCGAGACCCCAAGTGC‑CCCGAAAATCGCCACCAACC‑ATCAAAAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTc < 2:785506/251‑1 (MQ=255) gcagcGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAAtagatcggg > 2:760022/1‑243 (MQ=255) ggggggggcgTAAGCGAAAGACCCACCAGGACTTGGGT‑CGAGGAACGACTTTTTGGCGTATCCC‑ATCGAGAGCCCCAGTGC‑CCCGATAATCGTCACCAACC‑ACCCAAAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGc < 1:577193/246‑1 (MQ=255) gggggggcgTAAGGGTAAGACCCACAAGAATTTGGGT‑CGAGGAACGACATTTTGGGGTATCCC‑ATCGGGAGCCCCATACC‑CCCAATAATCTTCCCCACCC‑ACCCAAAAATGGCAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCg < 1:162125/247‑1 (MQ=255) cggcggGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCg > 1:394055/1‑251 (MQ=255) ggcgggcgTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCg > 2:460901/1‑250 (MQ=255) gcgggcgAAAGCGAAAGACCCCCAAGGACTTGGGT‑CGAGGAACGACTTTTTGGCGTATACC‑ACCGAGACCCCCAGTGC‑CCCGATAATCGTCACCACCC‑ATCCATAAATGGCAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGaa < 1:559045/251‑1 (MQ=255) gggcgTAAGCGTAAGAACCCCAAGGTCTGGGGT‑CGAGGAACGACATTTGGGCTTAACCC‑AGCGAGAGCCCCAGTGC‑ACCGATAATCGCCACCAACC‑AACCAAAAAGGACAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAgg < 2:572875/251‑1 (MQ=255) aagcataagACCCACCGGGACT‑GGGTGCGAGGAACGCCTTTTTGGCGTATACC‑ATCGAAAGCCCCAGTGC‑ACCGATAATCGCCACCACCC‑ACCCAAAAATGGCAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCt < 2:168558/251‑1 (MQ=255) accaccAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAAt > 2:485625/1‑251 (MQ=255) ggACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCt > 2:320299/1‑132 (MQ=255) naCTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTAACAATAAATTACg > 2:364104/2‑251 (MQ=255) aCTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGt > 1:631819/1‑251 (MQ=255) gggT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGtcat > 1:671159/1‑250 (MQ=255) gggT‑CGAAGAACGACTTTTTGGCGT‑TACCCACCGAGACCCCCAGGGC‑CCCGAAAATCCACCCCACCC‑AACCAAAAATGGAAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGtcata < 2:685187/251‑1 (MQ=255) gAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGtcatatcat > 1:610274/1‑250 (MQ=255) naCGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGcc > 2:363354/2‑251 (MQ=255) ttttGGCGTATACC‑TTCGAGACCCCCGGCCC‑ACCGATAATCGTCACCACCC‑ACCAAAAAATGGAAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCAtt < 1:42558/250‑1 (MQ=255) tttGGCATATACC‑ATCGAGGGCCCAATGGC‑ACCGATAATGGTCCCCAACC‑TTCCAAAAAGGGAAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTc < 1:502278/250‑1 (MQ=255) ccGAGAGCCCCAGTGC‑ACTAAAAACGGACACAAACC‑ACCCAAAAAGGGCATCCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACGCCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAAGTAAACTGCTGCGAAGGCGAGCTTCGTGACAAGAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAattatt < 1:79260/250‑1 (MQ=255) cGAGAGCCCCAGTGC‑ACCGATAATCGTCACAAACC‑ATCAAAAAAGGACAAACCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAAttatta < 1:297139/251‑1 (MQ=255) gagCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCg > 2:743938/1‑251 (MQ=255) aTCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGc > 1:615425/1‑251 (MQ=255) cgcccccaacc‑aTCAAAAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCg < 1:634321/246‑1 (MQ=255) cGTCCCCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGc < 1:363354/249‑1 (MQ=255) accaacc‑aTCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCGttat > 2:785606/1‑251 (MQ=255) accaacc‑aTCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGATAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCGttat > 1:499861/1‑251 (MQ=255) catAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGAGACGGGGATTAACCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTCCGCCATATCATACGCCTGCATTCGATAGTGGAATTATTATCGACCGGGTTATCGCTGATGCCGTTATTAATATAGct > 2:272470/1‑251 (MQ=255) catAAATGGCAATCCCGCCAGTAGAAACCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCACCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCGTTATTAATATAGct > 1:634434/1‑251 (MQ=255) tAAATGGCAATCCCGCCAGTAGAGGCCAGGGTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGGGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCGTTATTAATATAGctct > 1:87101/1‑251 (MQ=255) | GATGGTTAATACCAATGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGAT‑ATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGGCCAAAGCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGT‑CGAGGAACGACATTTTGGCGTATACC‑ATCGAGAGCCCCAGTGC‑ACCGATAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCCGACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCGTTATTAATATAGCTCT > NC_000913/4336651‑4337151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |