| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,483,254 | 0 | G | A | 32.6% | 85.4 / 18.8 | 49 | S29L (TCA→TTA) | emrK | tripartite efflux pump membrane fusion protein EmrK |
| Reads supporting (aligned to +/- strand): ref base G (26/7); new base A (0/16); total (26/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.32e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAACCGTGGCTTTTG > NC_000913/2483010‑2483504 | tttATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACg > 2:551113/1‑251 (MQ=255) gTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCaataa > 2:554873/1‑250 (MQ=255) tGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCACTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCaataaata > 2:3989/1‑250 (MQ=255) aCAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAATATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑Ac > 2:498481/1‑251 (MQ=255) aaTATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCg < 2:290611/251‑1 (MQ=255) atTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGcc > 2:144830/1‑250 (MQ=255) atTTGCCAGATTATTTTTAGATTTATTGAGTGCGATAGTGGAATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGCACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATGCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATACCATTGCCCAATAGGCATAGGCACCTGAAAACGCAATACATAAAACT‑ACCGCCa < 2:32726/251‑1 (MQ=255) ntGCCAGATCATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGCAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTACTTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAAt > 2:339831/2‑251 (MQ=255) aTTGAGTGCGATAGTGGCATCACTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTGGTTCGTATTTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAAAAATTGAATCTGCATCCCCCGGGACATAGGCGTCTTCTGTACTAATCATGTCTTCTATTCCCATTGACCAATAGGCATAGCCCCCTAAAACCGCAAAAAAAAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTg < 1:3989/250‑1 (MQ=255) tGAGTGCGATAGTGGCATCATTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCGGAGACTTGTGCAGAAATTGGATCTGCATCCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATCCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGtt < 1:144830/250‑1 (MQ=255) gagggCGATAGTGGCATCATTTTTATCCAGTGAAACTAAAATGTCCCCTTGTCAACCGTAGTTCGTTTTTTTATGATTAACGACAGTGACCTTCCCTGAGACTTGTGCAAAAATTGGTTTTGCTTTCCCCGTAACATAGGCGTCATCTGTACTAATCTTTTCTTCTAATTCCTTTGACCAATAGGAAAAGGCACCTAAAACCGAAATAAAAAAACCT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTa < 2:711025/246‑1 (MQ=255) gAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGtt > 1:343084/1‑249 (MQ=255) ggTGCGATAGTGGCATCAGTTTTACCCAGTGAAACTAAAATGTCCCCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGTTCTGCATTCCCCGTGACATAGGCTTCATCTGTCCTAATCATGTCTTCAAATTCCATTGCCCAATAGGCAGAGCCACCTGAAAACGCAATAAAAAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGa < 1:335030/250‑1 (MQ=255) gTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTCATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGa > 1:290398/1‑250 (MQ=255) gTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATa > 1:474697/1‑225 (MQ=255) gTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAAtt > 2:537641/1‑251 (MQ=255) ttttATCCAGTGAAACTAAAATGTCACCTTGTTGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAAtt > 1:556301/1‑250 (MQ=255) tttATCCAGTGAAACTAAAATGGCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTa > 2:125584/1‑250 (MQ=255) ccAGAGAAAATAAAATGTCACCGTGTCGAACGTATTTCGTATCTTTATGATAAACGGCAGTGACTCTCCCTGGGGTTTGCGCAAAAATTGGAGCTGCTTTCCCCGTGAAATAGGCGGAAGATGAACTAATCATTTCTTATAATTCCATTGACAAATAGGTAAAGGCCCGTGAAAACGTAATAAAAAAAATT‑TCCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTg < 2:65366/250‑1 (MQ=255) cAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGtt > 1:688425/1‑251 (MQ=255) tGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTcc > 2:685366/1‑250 (MQ=255) aacaaaaaTGTCCCCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGCCACTCCCTGAGCCTTGTGCAGAAATTGGATCTGCATCCCCCGTGACATAGGCGTCATTTGTACTAATAATGTCTTCAAATTCCATGGACCAATAGGAATAGCCCCCTAAAAACGAAAAAAAAAAAACT‑CCCGCCAATAAAGaa < 2:733361/195‑1 (MQ=255) aaCTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGaa > 1:733361/1‑199 (MQ=255) attAAAATGTCCCCTTTTCGAACGAATTTGGTATTTTTATGATTAACGAAAGTGACACTCCCTGAGATTTGTGAAAAAATTGGATCTGAATCCCCCGTGACATAGGCGTCATTTGTAATAATCATGTCTTATAATTCCATTGACCAATAGGCATAGGCACCTAAAACCGCAAAAAAAAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtat < 1:300689/249‑1 (MQ=255) aaaaaTGTCCCCTTGTAGAACGTAGTTCGTATTTTTATAATTAACGACAGTGACACTACCTGAGTTTTGTGCAGAAATGGGATCTGCATCCCCCGTGAAATAGGCGTCATCTGTACTATTAATGTCTTCTAATCCCATTACCCAATAGGAATAGGCACCGAAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtatta < 1:372039/250‑1 (MQ=255) tGTCGAACTTATTTCGTATTTTTATATTTAACGACAGTCACACTCCCTGAATTTTGTAAAAAATTTGGATCTGCTTTCCCCGTGAAATAGGCGTCATCTGTACAAATCATTTCTTCTATTCCCATTGCCCAATAGGCAAAGACACCTAAAAACAAAATAAAAAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTtcn < 2:343084/250‑2 (MQ=255) ggcGAACGTAGTTCGTATCTTTATGATTACCGACAGTGACCCTACCTGAGACTTGTGCAGAAATTGGATCTGCATCCCCCGTAACATAGGCGTCATCTGTACTAATCATGTCTTCTATTTCCATTGCCCAATAGGAATAGGCACCTAAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCGCATTtctc < 1:119320/248‑1 (MQ=255) aGTTCGTTTTTTTATGATTACCGCCAGTGACCCTCCCTGAGACTTGTGCAGAAATGGGATCTGCTTTCCCCGTGCCATAGGCGTCATTTGTCCTAACCTTGTTTTCTAATTCCATTGACCAATAGGCATAGCCCCCTAAAAACCCAAAAAAAAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGaaa < 1:554873/251‑1 (MQ=255) tATCTTTATGATTAACGACAGTGACACTTCCGGAGATTTGTGAAGAAATGGAATCTCCTTCCCCCTTGACATGGGCGTCATCTGTACTATTCATGTCTTCTAATTCCATGTACAAATAGGCATAGCCCCCTAAAACCGAAAAAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAt < 1:551113/250‑1 (MQ=255) aTCTTTATGATTAACGACAGTGACACTCCCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTCCTAATCATTTCTTCTAATCCCATTGACCAATAGGCATAGGCACCTGAAACCGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtg < 1:537641/250‑1 (MQ=255) aTCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtg > 1:24142/1‑250 (MQ=255) gATTAACGACAGTGACACTCCCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCAATTGACAAATAGGAATAGGCACCTAAAAACGCAATAAAAAAAACT‑ACCGCCAATAAAGAAAAGTATTTtcttct < 1:641238/172‑1 (MQ=255) gATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTtcttct > 2:641238/1‑172 (MQ=255) ccTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttcttc > 2:37124/1‑250 (MQ=255) agaCTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATc > 1:419796/1‑251 (MQ=255) gactggggaaaaaaTTGGATCTCCATCCCCCGTGACATGGGCGTCATCTATAATAATCATGTCTTCAAATTCCATGAACCAAAAGGAATAGGCACCTAAAAACG‑AAAAAAAAAAACTTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCa < 2:438358/240‑1 (MQ=255) tgtgCAGAAATTGGATCTGCATTCCCCGTGACATAGGCTTCATCTGTACTAATCATGTCTTCTATTTCCATTAACAAAAAGGCATAGCCCCCTAAAAACGAAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAac < 1:498481/250‑1 (MQ=255) ggcaaaaaTTGGATCTCCATCCCCCGTGAAATAGGCGTAATCTGTACTAATAATGTCTTCTAATTCCATTGACCAATAGGAATAGGCACCTGAAAACGAAAAAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAAcaca < 1:389005/246‑1 (MQ=255) aaGAAATTGGATCTGCATCCCCCGTAACAGAGACTTCATCTGTACAAATCATTTCTTCTAATTCCATTGACCAATAGGAAAAGACCCCTAAAAACGAAAAAAAAAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGt < 2:24142/250‑1 (MQ=255) aTCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGGATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTg > 1:377400/1‑251 (MQ=255) gCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGcac > 1:496863/1‑250 (MQ=255) cATCTGTACTAATCATCTCTTCTAATCCCATTGACAAATAGGCAAAGGCCCCTAAAAACGCAATAAATAAACCT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAgg < 2:731349/250‑1 (MQ=255) aaTCATGTCTTCTAATTCCATTGACCAATAGGTATAGGAACCTGAAAACGGAATAAATAAAACT‑ACCGCTAATAAAGAAAAGTATTATCGTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCAAATTATCACAGGAACGTTGGAGGACTAATTTaa > 2:1893/1‑250 (MQ=255) aaTCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGAATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTaa > 1:564369/1‑250 (MQ=255) cATTGCCCAATAGGCATAGGCCCTTAAAAACTAAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAaaca < 2:81237/251‑1 (MQ=255) aggcaCCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAACCGt > 1:63761/1‑251 (MQ=255) caCCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTaa > 2:57119/1‑212 (MQ=255) caCCTAAAAACGCAATAAAAAAACCT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTaa < 1:57119/212‑1 (MQ=255) ccTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAACCGTGGCtt > 1:271540/1‑251 (MQ=255) gAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAACCGTGGCTTTTg > 1:658307/1‑251 (MQ=255) | TTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACT‑ACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAACCGTGGCTTTTG > NC_000913/2483010‑2483504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |