| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,986,995 | 0 | A | C | 32.3% | 135.7 / 10.7 | 62 | Y24S (TAC→TCC) | ftnB | putative ferritin‑like protein |
| Reads supporting (aligned to +/- strand): ref base A (35/7); new base C (0/20); total (35/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.65e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTGATGATTTAAGCATTTTCTTATACCCGTTCAGACGTTATTCTTATTTCAGATCATCGTCAGAATTGACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCTAGTACGTTGGCACAGTTAGCCGAT > NC_000913/1986747‑1987242 | gtgatgaTTTAAGCATTTTCTTATACCCGTTCAGACGTTATTCTTATTTCAGATCATCGTCAGAATTGACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑ACGAGTTTTACGCATCCAATCTCTAcc > 2:407765/2‑251 (MQ=255) atgatTTAAGCATTTTCTTATACCCGTTCAGACGTTATTCTTATTTCAGATCATCGTCAGAATTGACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTc > 2:543117/1‑251 (MQ=255) aCGTTATTCTTATTTCAGATCATCGTCAGAATTGACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCt < 2:661409/251‑1 (MQ=255) gTTATTCTTATTTCAGATCATCGTAAGAATTGACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCAACTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCACTCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTg > 2:86/1‑250 (MQ=255) tATTCTTATTTCAGATCATCGTCAGAATTGACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAAc > 1:206453/1‑251 (MQ=255) aTTCTTATTTCAGATCATCGTCAGAATTGACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAAc < 1:346081/250‑1 (MQ=255) tCAGATCATCGTCAGAATTGACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGcc < 1:543117/250‑1 (MQ=255) gACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGCAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATACGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGc > 2:614953/1‑251 (MQ=255) ccTCCACGATCACTTTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTATT‑TATGGTTTTTTGATTTATCTTGCACCTCTCCACTTCTGGATAAAAGGA‑TATTAGGTAGGGCACCCGCTGAAATGCTTCTCAACCTCACCTCTCAAAGGACCC‑GCGATTTTTACGCACCCAATCTCTCCCTTCCCCGGAGTAACTGGTGTTCTGAACAGAGTTTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGca < 2:284396/250‑1 (MQ=255) aCTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TCTTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCCTCGCGCCCAGGc > 2:356169/1‑250 (MQ=255) ccACGATCACATTTCGGACCGGAAGAAAGAAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCCCCTCCCCACTTCTGAATATAAGGA‑TATTAGTTATGGCACCCGCTGGAATGCTTCTAAAACTCACCTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTCCCTTCCCCTGAGTAACTGGTGTTCTGAACAGAGTCGGAACGGCACCGCCACTTTCCTTCGCGCCCAGGcac < 1:61885/249‑1 (MQ=255) gggccgggaaaaaaGGATTTATTTTACAAACA‑TAATGTTTGGTTTTTTGATTTTTCTTGCCCCTCTCCACTTC‑GGAAAAAAGGAATATTAGGTATGGCACCGGCTGGAATGCTTCTCAAACTAACCCCTCAAATGAGCC‑GCGAGTTTTACGCTTCCAATCCCTCCCTTCCCCGAAGTAACTGGTGTTCTAAACGGGGACTGAAGGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCa < 2:608619/240‑1 (MQ=255) cGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCCCCTCCCCCCTTCTGGATATAAGGA‑TATTGGGTATGGCACCCGCTGGAATCCTTCTCAAACTCAACCCTCAAATGAACC‑GCGATTTTTACGCATCCAATCTCTCCCTTCCCCTGAGAACCTGTTGTTCTAAACAGAGTCTGAACGCCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGAccc < 1:616881/250‑1 (MQ=255) aCCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAat > 1:644744/1‑251 (MQ=255) ngCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAatgat > 2:327850/2‑251 (MQ=255) ggCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAatgat > 1:450413/1‑251 (MQ=255) aGAAAGGAATTCTTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATgcg > 2:490712/1‑251 (MQ=255) gAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGCGTAATGTGACCCAAATGATgcgc > 2:639869/1‑251 (MQ=255) aggcattattCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATg > 2:85649/5‑251 (MQ=255) aGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCCCCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATg > 2:688673/1‑251 (MQ=255) ggAATTATTCTGAAAACAGTATT‑TATGGTTTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCGGGAATTCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTCCGCCTCCAATCTCTCCCTTCCCCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGt < 1:388350/251‑1 (MQ=255) aaTTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGttt > 1:360004/1‑251 (MQ=255) attattCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGttt > 1:8952/1‑250 (MQ=255) gCAAACCGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATg > 2:548534/1‑251 (MQ=255) aaCAGTAAT‑TTTGGTGTTTTGATTTTTCTGGCCCCTCTCCACGTTTGGATATAAGGA‑TATTAGTTAGGGCACCCGCTGGAATGCTTCTCAACCCCACCTCCAAAATGAACC‑GGGATTTTTACGCATCCAATCTCTCCCTCCCCCTGAGTAACTGGGGTTCTGAACAGAGTCTGACCGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGAccc < 2:80985/222‑1 (MQ=255) aaCAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGAccc > 1:80985/1‑222 (MQ=255) aCAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGa > 2:8471/1‑248 (MQ=255) gTAAT‑TATGGTGTTTTGATTTATCTTGCCCCTCTCCCCTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTAACCTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTCCCTTCCCCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAgtg < 1:280299/251‑1 (MQ=255) aaT‑TATGGTTTTTTGATTTATCTTGCCCCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCACCTCTCAAATGACCC‑GCGATTTTTACGCATCCAATCCCTCCCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAgtgt < 1:327850/250‑1 (MQ=255) aT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCg > 1:381959/1‑251 (MQ=255) tttGATTTATCTGGCACCTCTCCACTTCGGGATAAAAGGA‑TATTAGGTATGAAACCCGCGGGATTCCTTCTCAACCTCACCTCTAAAAAGAACC‑GCGAGTTTTACGCACCCAATCTCTCCCTTCCCCTGAGTAACGGGTGTTCTGAAAAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTAccc < 2:546742/250‑1 (MQ=255) ttGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATg > 2:584009/1‑218 (MQ=255) ttGATTTATCTTGCACCCCCCCTCTTCTGGATATAAGAA‑TATTAGGTATGGAACCCTCGGGAATGCTTCTCAAACTCAACTCTAAAATGACCC‑GCGAGTTTTACGCATCCAATCTCTCCCTTCACCGGAGTAACTGGTGTTCTGAACAGAGTCTAAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATg < 1:584009/218‑1 (MQ=255) aTTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATc > 2:299778/1‑251 (MQ=255) tttATCTGGCACCTCTCCCCTTCTGTATATAGGGT‑TATTAGGTAGGGCACCCGCGGGAATGCTCCTCAAACTCAACCCCCAAAGGACCC‑GCGAGTTTTCCGCACCCAACCCCTCCCTGCACCTGAGTAACGGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATc < 1:656299/250‑1 (MQ=255) gCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTc < 2:168444/130‑1 (MQ=255) gCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTc > 1:168444/1‑130 (MQ=255) ctcCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGCGTCGGCGCTACCCCCATCGTTAAAGCCATTGAt > 1:460253/1‑251 (MQ=255) tcggaatatAAGAA‑TATTAGGTATGGCACCCGCTGGAATGCTTCCAAAACTCAACTCTAAAATGAACC‑GGGAGTTTTACGCACCCATTCTCTCCCTCCCCCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTccc < 2:14505/245‑1 (MQ=255) aaGGA‑TATTGGGTATGGCACCCGGTGGAATGCTTCTCAAACTCAACTC‑CAAAAGAACCCGCGAGTTTTCCACATCCAATCTCTACCTTCCCCGGAATACCTGGTGTTGGGACGAGAGCCTAAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGGGTCGGCGCTACCCCCATCGTTAAAGCCAGTGATGTTCCCGGTGaaaaa < 1:614953/250‑1 (MQ=255) tatTAGGTAGGCCACCCGCGGGAATCCTTCTAAAACCCAACTCTAAAAGGACCC‑GCGGTTTTTCCGCATCCAATCTCTCCCTTCCCCGGAGTAACTGGTGTTCGAAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGaa < 2:226809/250‑1 (MQ=255) ntGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTgg > 2:329148/2‑250 (MQ=255) ggCACCCGCTGGAATGCTTCTAAAACTCACCTCTCAAATGAACC‑GGGAGTTTTACGCATCCATTCTCTCCCTTCCCCTGAGTAACTGGTGTTCTGAACAGAGTCTGACCGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCAACGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGgaan < 2:336593/251‑2 (MQ=255) ggCAACCGATGGAATGCTTCTAAACCTCACCTCTCAAATAAACC‑ACGTGTTTTACGCCTCCATTCTCTCCCTTCACCTGAGTAGCTGGTGTTCTGACCAGCGTCGGACCGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGgaa < 1:407765/250‑1 (MQ=255) cGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGt > 2:616476/1‑251 (MQ=255) cGCTGGAATGCTTCCCAAACTCAACTCTAAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTCCCTTCCCCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGt < 1:731686/251‑1 (MQ=255) gCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTATATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCaaaaa > 2:388390/1‑250 (MQ=255) tctcAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTcc > 1:347833/1‑242 (MQ=255) tctcAAACTCAACTCTAAAATGAACC‑GCGATTTTGACCCACCCAATACCTACCTCCACCTGTGTCCTTGGTGTTCTGAACAGGGTCGGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTcc < 2:347833/242‑1 (MQ=255) tctaaacctaaccactaaaagacccc‑GCGAGTTTTACGCTCCCAATCTTTACCTTCCCCGAAGTACCTGGTGTTCTAAACAGAGTCTAACCGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAAc < 1:329148/225‑1 (MQ=255) actcaactcTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGga > 1:499941/1‑249 (MQ=255) aaaTGAACC‑GCGCGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTTCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGACCTATCTGGAAGAACTGTTCCAAAAAACGCTGGAAGAATACGAGCa > 2:631689/1‑250 (MQ=255) gAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGtt > 2:530516/1‑251 (MQ=255) gatttttACGCATCCAACCCCTCCCTTCCCCTGAGTACCTGTTGTCCTGAACAGAGTCTAAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCt < 2:71865/243‑1 (MQ=255) gAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCAtt > 2:264577/1‑171 (MQ=255) gAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCt > 1:71865/1‑246 (MQ=255) gAGTTTTACGCACCCAATCTCTCCCTTCCCCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCAtt < 1:264577/171‑1 (MQ=255) tttACGCACCCAATCTCTCCCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCTAGTACGtt < 1:662747/250‑1 (MQ=255) cATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCTAGTACGTTGGcac > 1:223092/1‑249 (MQ=255) cATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCTAGTACGTTGGcac > 1:88062/1‑249 (MQ=255) aTCCAATCTCTCCCTTCACTTGATTACCTGGTGTTCTGAACAGATTCTGACCGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCTAGTACGTTGGCACAGt < 1:688673/251‑1 (MQ=255) tctACATTCACCTGAGTAACTGGTGTTCTGAACAAAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCAAAGAGTAATGATACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAAAGTTCTAGTACGCTGGCACAGTTAGACGAt > 2:413130/1‑251 (MQ=255) | TTGATGATTTAAGCATTTTCTTATACCCGTTCAGACGTTATTCTTATTTCAGATCATCGTCAGAATTGACTCCACGATCACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAAT‑TATGGTGTTTTGATTTATCTTGCACCTCTCCACTTCTGGATATAAGGA‑TATTAGGTATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACC‑GCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCTAGTACGTTGGCACAGTTAGCCGAT > NC_000913/1986747‑1987242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |