| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,429,984 | 0 | T | G | 40.7% | 73.1 / 12.5 | 54 | L41V (TTG→GTG) | cycA | D‑serine/alanine/glycine/:H(+)symporter |
| Reads supporting (aligned to +/- strand): ref base T (4/28); new base G (22/0); total (26/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.92e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATC > NC_000913/4429742‑4430229 | ttgTATTCATCCCGCGTATTGTTACCTNATATCGATGAGTCCCGATACAGATGCGTCGTATCATAGACTGACTAAAGGCCGTAGAACCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAGGTCGTTGCCGATGATCAGGCGCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGgttgtt < 2:225012/245‑1 (MQ=255)tAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGttt < 1:231773/248‑1 (MQ=255) aTCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGGGC‑CCTTGGTGCGGGGTGGTTTAAGGGG‑GCTgg > 1:214912/1‑251 (MQ=255) cccGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CCTTTGGACGGGGGTGTTTTTTGGG‑GCTGGcc > 1:237038/1‑250 (MQ=255) cccGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGGTGTTTATGGGG‑TTTGGc > 1:96542/1‑250 (MQ=255) cccGCGTATTGTTACCTAATAACGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGc < 2:134788/250‑1 (MQ=255) ccGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGG‑CCTTGGTTCGGGGGTGTTTATgggggttggca > 1:401637/1‑243 (MQ=255) aTTGTAACCTAATATCGCTGAGTCCCGATACAGAGTCGTCGTATCATAGACGGACTAAAGGCCGGAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGAt < 2:337118/251‑1 (MQ=255) tACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGC‑TCTGGCAAAACGATTA‑Gc < 2:405039/250‑1 (MQ=255) ccTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATATACGGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTGGCCGATGAGCAGGCTCCGGCTGAACAGTCGCTTCGGCGCAATCACACAAACCGTCAGATTCAGCTTATTTCCATTGGCGGTGC‑CAGTGGTACGGGGTTGTTTATGGGG‑TCTGGCTAAACGATTA‑GCCt < 2:199176/250‑1 (MQ=255) cGATGAGGCCCGATACAGATTCGTCGTATCANAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGcc < 2:237038/251‑1 (MQ=255) aTGAGCCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCGGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATGGGCGGGGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGt < 1:150650/251‑1 (MQ=255) cccGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTAAGGGGGTGGTTTTGGGG‑GCTGGCAAAAAGATTA‑GCCTTGCCggggcggcggtcc > 1:178729/1‑241 (MQ=255) ccGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGGAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCAt < 1:364186/251‑1 (MQ=255) gATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGGGC‑CATTGGGACGGGGGTGTTTTTGGGGGTTGGGCAAAA‑GATTAACCCTTGC‑GGGCCGTCGGTCAttt > 1:231813/1‑251 (MQ=255) aGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGtt < 1:25118/251‑1 (MQ=255) gcgtATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGa < 1:190548/250‑1 (MQ=255) tATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTTGTACGGGGGTGTTTATGGGG‑TCTGGCAAAACGGGTA‑GCCTTGCCCGGGCGGCGACAATTTTTGTTTATATgttc > 1:226771/1‑247 (MQ=255) aGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGt < 1:227339/250‑1 (MQ=255) gactgactAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGttt < 1:413144/251‑1 (MQ=255) actgactAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTGTTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGtttt < 2:480948/251‑1 (MQ=255) tAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGGTGTTTTTGGGG‑GCTGGCCAAAAGATTA‑GACTTGCCGGGCCGTCGCGCATTTTCGTTTATATTATTATT‑GGTTTTTTGctc > 1:171209/1‑251 (MQ=255) aaGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGCGC‑AATTGGTACGGGGGTGTTTATGGGG‑GCTGGGAAAACGAATA‑GACTTGCCGGGCCGTCGATCAATTTTGTTTTTATGATCTTT‑GGtttttttgactt > 1:478164/1‑243 (MQ=255) aaGGCCGTAGAGCCTGAACAACACAGACAGGCACCGGAAGAAAAACACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGGTGTTTATTGGG‑TCTGGCAAAAAGATTT‑GCCTTGCCGGGGCGGCGATCATTTTCGtttttttaattttttggttttttctctt > 1:132638/1‑226 (MQ=255) ccGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTc < 2:374458/251‑1 (MQ=255) gAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCggg < 2:301049/250‑1 (MQ=255) aacaacACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGAGCGAATTGG‑ACGGGGGTGGATATGGGG‑AGTGGCAAAAAGATTA‑GACCTGCCGGGGCGTCGATAATTTTAGTTTAAATGATCCCT‑GGGTTTATGCTCTTTTTCGTGATGCGGGc > 1:285467/1‑250 (MQ=255) agacagGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTTGTACGGGGGTTTTTATGGGG‑GCTGGCAAAACGAATA‑GCCTTGCCGGGGCGTCGAGCATTTTCTTTTATATTATCATT‑GGTTTTTTGTCCTTTTTCTTGAttggggagaagggggg > 1:195797/1‑236 (MQ=255) tACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CAATGGGACGGGGGTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGGCGGCGATCATTTTTGTTTTTATGATCATT‑GGGTTTTTGCTCTTTTTCGTGATTGGGGC‑AATTGGGGGATtgctg > 1:181379/1‑251 (MQ=255) gaagaaAAAAACATGGGAGATCAGTTAAATGTCGTTGCCTATGATCGGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTc < 2:259164/251‑1 (MQ=255) aaaaaaCATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGGACGGGGGTGGTTATGGGG‑GCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGGTCATT‑GGTTTTATGCTCTTTTTTGTGATGCGGGC‑AATGGGGGGATTGGTGCTTTCGAATc > 1:355963/1‑251 (MQ=255) ggaatagcAGGTAAAAGTCGTTGCCGATGAGNAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGGGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTGCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACa < 2:234437/244‑1 (MQ=255) aGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTc < 1:378492/202‑1 (MQ=255) gATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CCTTGGGACGGGGGTGGTTTTGGGG‑GCTGGCAAAAAGATTA‑GCCTTGCCGGGGCGTCGATCATTTTTGTTTATATTGTCATT‑GGGTTTATTCTCTTTTTTGTGGTGCGGGCGAAGGGGGGATTTG‑TGCTTTTGGATTTGGGATACaaaat > 1:159505/1‑249 (MQ=255) cAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCttt < 2:178729/251‑1 (MQ=255) aaaaGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGGTGTTTTTGGGG‑TCTGGCAAAACGATTA‑GCGCTGCCGGGGCGTTGATCATTTTCGTTTATATGATCATTTGGTTTT‑TTCTCTTTTTTGTGATGAGGGC‑AATGGGGGGATTGCTGTTTTTGAATCTTGGATAAAAATCttttggtt > 1:296787/1‑247 (MQ=255) aaaaGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGGGC‑CATTGGGACGGGGGTGTTTTTGGGG‑GCTGGCAAAACGATTA‑GCCTTGCCGGGCCGGGGATACTTTTCGTTTATATTATCATT‑TGTTTTATGGTCTTTTTTGTTATGGGGGC‑AAAGGGGGGATTGCTGGTTTCCGATCTTGAATAAAAATCTTTTAGTg > 1:183950/1‑251 (MQ=255) gTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CAATTGTACGGGGGTGGTTATGGGG‑TCTGGCAAAAAGATTA‑GCCTTGCCGGGCCGGCGCGCAGTTTCGTTTATATGATCATT‑GGTTTTTTGCCTTTTTTCGTGTTTCGGGC‑CATGGGGGGATTGCTGCTTTTGCATCTGGAATAAAAATCTTTTAGGGACtt > 1:319189/1‑251 (MQ=255) cGATGATCAGGCTCCGGCTGAACATTCGCTACGGCGCAATCTCACAAACAGACATATTCAGCTTAGTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTGTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCg < 2:418654/251‑1 (MQ=255) atcgtcatgCTCCTGCTGAACAGTCGCTACGGGTCAATCTCACAAACCGGCATATTAAGCTTATTGCCATTGGCGTTGC‑CATTGGGACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGGCGGGCCGTCTATCATTTTCGTTTATCTGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATTGGGTAATTGCTTCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGAt < 2:434370/243‑1 (MQ=255) atCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTa < 2:355963/251‑1 (MQ=255) cAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACt < 1:296618/251‑1 (MQ=255) gCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGG‑CCTTTGTACGGGGGTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGGCGGCGATCCTTTTTGTTTATATTATAATT‑TGTTTTTTTCTCTTTTTTGTGGTTCGGGC‑CATGGGGGAAGTGCTGCTTTCGGATCTGGGATACAAAACTTTTTGTGAATTCTCTTTCGCTTTACTCgg > 1:148894/1‑251 (MQ=255) cTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGAGC‑CCTTGGGACGGGGGTGTTTATGGGG‑TCTGGCAAAAAGATTA‑GCCTTGCCGGGCCGCCGATAATTTTCGTTTATATGATCATT‑GGTTTTTTGCTCTTTTTCCTGATGCGGGC‑AATGGGGGAATTGATGCTTTCGAATCTGGAATACAAATCTTTTCGTGACTTCCCTTCCGATTTACTCGGGCCGTgg > 1:405452/1‑251 (MQ=255) cGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCAc < 1:430131/251‑1 (MQ=255) cacaAACCGACATATTCAGCTTATTGCCATTGGCGGGGC‑CATTGGAACGGGGGTGTTTTTGGGG‑TCTGGCAAAAAGGGTA‑GCCCTTCCGGGCCGGCGATCATTTTCGTTTATATGTTCATT‑GGGTTTATGCTCTTTTTTGTGTTGCGGGC‑CATGGGGGAATTGCTGCTTTCGAATCTGGAATACCAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGagtttttaacggctgggctt > 2:309267/1‑232 (MQ=255) aaCCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CACTGGGACCGGGGTGGTTATGGGG‑TCTGGCAAAACCATTT‑GGCTTGGCGGGGCGTCGGTCATTTTCGTTTTTTTGATCATT‑GGTTTTATGTTCTTTTTTGTGATGCGGGG‑GATGGGGGGATTTCTGGTTTTGGATTTGGAAATCAAATTTTTTAGAGACCTCGCTTCCGCTTTACTCGGGCCGGGGGTCGGGTATTTTACCCGCTGGACTTACTg > 2:82077/1‑251 (MQ=255) gACATATTCAGCTTATTGCCATTGGCGGTGC‑CCTTGGTACGGGGGTGTTTTTTGGG‑TCTGGCAAAACGATTA‑GCCTTTCCGGGCCGTCGATCATTTTCGTTTATATGATCCTT‑GGGTTTTTTCTCTTTTTTGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTTGAATCTGGAATACAAAACTTTTAGTGACTTCGCTTTCGATTTACt > 1:210710/1‑208 (MQ=255) gACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACt < 2:210710/208‑1 (MQ=255) tGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAAcc < 2:96542/250‑1 (MQ=255) ggTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGc > 1:224086/1‑248 (MQ=255) c‑cATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTNCTGCTGGGTTGTAACCGGTATGGCAGACggg > 2:237664/1‑249 (MQ=255) gTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCg < 1:289172/251‑1 (MQ=255) aCGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTCTGCTCTTTTTCGTGATGCGGGC‑ACTGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTATCCGGTATGGCAGCCGTGGTGGCGAt > 2:137012/1‑251 (MQ=255) cGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATc < 2:183950/251‑1 (MQ=255) | TAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGC‑CATTGGTACGGGGTTGTTTATGGGG‑TCTGGCAAAACGATTA‑GCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATGCGGGC‑AATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATC > NC_000913/4429742‑4430229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |