| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,159,837 | 0 | A | G | 27.3% | 85.8 / 12.0 | 44 | I572T (ATC→ACC) | fhuE | ferric coprogen/ferric rhodotorulic acid outer membrane transporter |
| Reads supporting (aligned to +/- strand): ref base A (2/30); new base G (12/0); total (14/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TAACACCACCGCCGACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGCGTGGTGTGGTTT > NC_000913/1159595‑1160085 | tAACTCCACCGCCGACCGACAACTCGGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCTGCTGCCAGGTGTCGGTAATGGCGCCGTTGAGTTCAAATTCCTCCCCTTTACTGACTGTCCCATCCTCCGCTTTATAGGCGGTTGCGCCGTTGCTGCCGGGGATAGgtg‑t < 2:275327/250‑1 (MQ=255) caccGCCGACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTGCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTGATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTg < 2:450995/251‑1 (MQ=255) cccgccgACCGTCAACTCGGGCATGACAGGCATCCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGGCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTTGCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTgg < 2:288745/250‑1 (MQ=255) cgccgACCGTCAACTCGTGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTCGCAGATTAGGAATAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAATTGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCGCCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGAc < 2:159914/251‑1 (MQ=255) gccgACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACt < 1:407133/251‑1 (MQ=255) aCAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AAt < 1:458316/251‑1 (MQ=255) aaCCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTCCTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGaa < 1:42644/251‑1 (MQ=255) aCCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGGTGCTTCTGGGGGTAAGTG‑TAACGGAGGAGTGAGCGAACTTATCCTGGTC‑AATAC‑GGa > 1:360205/1‑249 (MQ=255) aGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGc < 2:4332/250‑1 (MQ=255) ggAACATTTTAACCGTGGTGCGTGGCAGAGTAGGATTAACGGCGTTTCCGTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACgtg < 2:260710/250‑1 (MQ=255) aTTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTGCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTggtggt < 1:78599/251‑1 (MQ=255) gtggtgCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCt < 1:6215/251‑1 (MQ=255) ggCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATcc < 1:249447/250‑1 (MQ=255) aTTAGGATTAACGGCGTTTCCTTCGTTATCCTCGGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCTTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCATTCCg < 1:311971/251‑1 (MQ=255) ccTTCGTTAACCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGt < 1:265906/250‑1 (MQ=255) ccTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGGTGCCGGGGGGAGGGG‑GAAAGGGGGGCTGAGCGACATTTTACTGCTC‑AATAA‑CGAAGATGGCGAACGTGGGGGGCAGAAAGAGATTCATCCAGTACGCGTTCAGACCCAGCGCGTATGT‑GTTAccc > 1:122129/1‑250 (MQ=255) aaTATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGATTTGCCGGTGGTGACGGGGGGAGGGG‑TACCGGGGGACTGAGCGGCATTTTCCTGCTC‑CATAC‑GGAAGATGGGCAACGGGGGGGGCAGACGGCCATTAATCAAGTCCGATTTCCAAACCAACTCGTAGTT‑GTTTCCgggggatg > 2:469499/1‑245 (MQ=255) aaTATAGCGCGGTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTg < 1:9481/251‑1 (MQ=255) gTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTTGCCGTTTCTGCCCGGGGTAGGTG‑TACCGGGGGGCTGGGCGGCATTTTCCTGCTC‑CATAA‑GGAAGAAGGGTAACGTGGTGGGCGAACGGCCATTCATCCCGTCCGATTTCCGACCCCGCCCGGAGTT‑GTTACCGGGGGTTGGGGCCAgct > 1:125191/1‑248 (MQ=255) gTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTTGCCGTTGCTGCCGGGGGTAGGGG‑TACCGGGGGACTGAGCGACAATATCCTGCTC‑AATAC‑GGAAGAAGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGGGATTGGAGCCCGat > 1:279114/1‑250 (MQ=255) aaaTGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTg < 2:474797/251‑1 (MQ=255) aTGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTTGCCGTTTCCGCCGGGGGTAGGGGGAACCGG‑GGGCTGAGCGGCATTAACCTGCTC‑CATACAGGAGGA‑GGGTAAAGTGGGGGTCAGACGGCTATTTATCCCGGCCGAATTCAGACACAGCTCGGTGTT‑TTTACCgggggtttgaggccggtattttcctga > 1:362527/1‑225 (MQ=255) ccAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGAt < 1:145172/251‑1 (MQ=255) aGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTTGCCGTTTCTGCCGGGGGTAGGGG‑TAACGGGGGACTGGGCGACATTATCCTGCTC‑AATAC‑GGGAGATGGCTAAAGTGGGGGGCAGACGGCTATTCATCCAGTCCGATTTCAGAACCAGATCGTAGTTTGTT‑CCGGGGGTTGGGGCCAGAAATTTGCCTGAACCGTCACCATct > 1:27844/1‑250 (MQ=255) gTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCAttt < 1:438826/250‑1 (MQ=255) cgcCGTTGAGTTCAAATTCCACCCCTTTACTGACTGGTCCAGCCCCCGCTGTATAGGCGGTTTCGCCGTTGCTGCCGGGGATATGTG‑TACCGGTGGACTGATCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCGAACGTGGTGGTCTGACGGCTATTCATCCAGTCCGATTTCAGAACCAGCTCTTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGGCACGATCATTTTGCGGCTGG‑aaa < 2:317548/251‑1 (MQ=255) gcCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCTCCGTTTCTGGCGGGGATAGGTG‑TACCCGGGGACTGAGCGGCATTTTCCTTCTC‑AATAA‑GGGAGATTGCTTAAGCGGTGGGCCGACCGCCATTTCTTCAGTCCGATTTCAGACCCAGCTCGTTGTT‑GGTTCCGGTGGTTGGGGGCCGGTATTTTCCTGTACTGTCCCGTTCATTTTTCGGCTgggaa > 2:123213/1‑247 (MQ=255) aaaTTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTTGCCGTTGCTGGCGGGGGTAAGGG‑GACCGGGGGACTGAGCGACAATATCACGCTC‑AATAC‑GGCAGATGGCGCAAGCGGGGGGAAGACGGCGATTACTCCGGTCCGATTTTACACCCAGCTCGCAGAT‑TTTACCGGTGGTTGGAACCCGACATTTGTCTGAAACGTCCAGATCCTTTTTCGGCTGG‑AGAAAAGAggggtagc > 1:20401/1‑245 (MQ=255) aaaTTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCCGGGGTAGGGG‑TACCGGGGGACTGAGCGACATTATCCTGCTC‑CATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGGCCGATTTCAGACCCCACCCGGAGGT‑GTTACCGGGGGTTGGGGGCCGAAATTTTTCTGAACTGTCACGATCATTTTTCGGCTGGGAAAATaagggatcgc > 1:220342/1‑242 (MQ=255) aaTTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTTGCCGTTGATGCCGGGGGTAGGGG‑TACCGGTGGACTGGGCGGCATTATACTGCTCCAAAAG‑GGAA‑ATGGCTAACGGGGGGGTCAGACGGCAATTTCTCCAAACCGAATTCAGAACCCGCCCGGAGTT‑GTTAAAGGTGATTGGAGACAAATATTTTCCTGAACTGTCACGATCATTTTTCGGGTGG‑GAAAGAGATGtatatat > 1:69129/1‑248 (MQ=255) aaTTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCt < 1:58420/251‑1 (MQ=255) cACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGt < 1:123213/251‑1 (MQ=255) ttACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGTAGGTc < 1:425670/249‑1 (MQ=255) ttACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGGTGCTGCCGGGGGTAGGTG‑TACCGGTGGAATGAGCGGCATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGGGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGGGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑GAAATAGAGGGATAGCTGGCGGAGGTCgg > 1:273508/1‑250 (MQ=255) gactgTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGGAAGGGG‑TACCCGGGGGCTGAGCGGCATTATCCCGCTC‑AATAC‑GGAAGATGGCTAACGCGGTGGTCAGGCGGCTATTCCTCCCGTCCGATTTCAGACCCCGCTCGTTGTT‑GTTACCGGTGATTGGAGCCAGGTATTTGCCCGAACTGTCACCATCATTTTGCGGCTGG‑AAAAAAGAGGGATAGCTGGGGTAgggtgacccgg > 1:343994/1‑242 (MQ=255) tgTCCCATCCACCGCTTTATAGGCGGTTTTGCCGTTGCTGCCGGGGATAGGGG‑GACCGGTGGACCGAGCGACATTATCCTGCTC‑AATAA‑GGGAGATGGGTCACGGGGGGGGCCGACGGCTATTCATCCAGTCCGGTTTCAGACCCAGCTCGTAGGT‑GTTACCGGTGATTGGAGCCAGATATTTTCCTGAAATGTc > 1:184156/1‑195 (MQ=255) tgTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTc < 2:184156/195‑1 (MQ=255) gTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGt < 2:290853/250‑1 (MQ=255) cccATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCa < 1:469499/250‑1 (MQ=255) cATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTg < 1:147687/251‑1 (MQ=255) cGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGTCCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTTG‑AAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGc < 2:37416/251‑1 (MQ=255) gcCGGGGATAGGTG‑TACCGGTGGACTGGGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGTCGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGCgtggt < 2:318935/249‑1 (MQ=255) gcGGGGATAGGTG‑TACCGGTGGGCTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGTTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGCgtggtgtg < 2:322877/250‑1 (MQ=255) ggATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGCGTGGTGTGGttt < 1:127442/251‑1 (MQ=255) | TAACACCACCGCCGACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGTTTCGCCGTTGCTGCCGGGGATAGGTG‑TACCGGTGGACTGAGCGACATTATCCTGCTC‑AATAC‑GGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAGTT‑GTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGG‑AAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGCGTGGTGTGGTTT > NC_000913/1159595‑1160085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |