| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 37,338 | 0 | T | G | 28.6% | 137.0 / 10.5 | 72 | T163P (ACC→CCC) | caiC | carnitine‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base T (12/38); new base G (19/1); total (33/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.45e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCAGCACAAAGGTGGCCCCGGCAGAAAACGCCGCCATCGCCGCAGTACACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCATAATCGCGCCAATTTTTGCCAGCCCGAAC > NC_000913/37089‑37588 | ccAGCACAAAGGTGGCCCCGGCAGAAAACGCCGCCATCGCCGCAGTACACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTg < 1:342225/251‑1 (MQ=255) aaaGGTGGCCCCGGCAGAAAACGCCGCCATCGCCGCAGTACGCTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCGGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGgtt < 1:320721/251‑1 (MQ=255) gggggCCCCGGCAGAAAACGCCGCCATCGCCGCAGTAAACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGgttgtt < 2:115158/248‑1 (MQ=255) cGGCAGAAAACGCCGCCATCGCCGCAGTACACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGCAGGGTGTTGAtttttt > 1:216781/1‑250 (MQ=255) cGGCAGAAAACGCCGCCATCGCCGCAGTAAGCTGGCAAACGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTc < 1:480137/251‑1 (MQ=255) aCGCCGCCATCGCCGCAGTACACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACCCCTTTCGGTCGGGAGGTGGTGCCGGAGGTGACGAGAATTTCCGCCGTATCGTCAGTCGATATCGGCGGTTCATAG‑CA‑CAA‑GGCGGCAGggtgtttgttttttacgttgatt > 2:446150/1‑234 (MQ=255) cgccgcCATCGCCGCAGTACACTGGCAAACGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTGGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTaa < 1:393042/251‑1 (MQ=255) ccgccATCGCCGCAGTACACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGCAGGGTGTTGATTTTTCCGTTGAGGaaa > 1:347484/1‑250 (MQ=255) aTCGCCGCAGTACACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGACGAGAATTTCCGCCGTAGCGTCAGTCGATAGCGGCGGGGGCTAG‑CA‑CAAAGGGGGGNGGT‑GTTTGTTTTTCAGTTGAggcaacgcaac > 2:239657/1‑241 (MQ=255) gcAGTACACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGCAGGTTGTTGATTTTTCAGTTGAGTAAAAGAACTCCCGcc > 1:153159/1‑251 (MQ=255) cAGTACACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCGGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGGGCATAG‑CC‑AAA‑GGGGGGAGGCTGTTGTTTTTTCAGGTGAGTAAACGAAcaaacgccc > 2:475968/1‑243 (MQ=255) ggCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGc < 1:406595/250‑1 (MQ=255) aaTCGATATGAACCGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACCCCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGa < 1:193575/251‑1 (MQ=255) ccaatatGAAACGCAGGCATTACCGTCAGGGAGAGGTCATCTTCACACAGTGCCCACTGCCAGGCGGAGTAATAGCCAGCGAAGCGCAGTTTGTAATGGGTAATCACCACCCCTTTCGGTCGGGAGGTGGTGCCGGAGGTTAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGAGTTGTCAGTTGAGTAAACGAACGCACGCCATCGTCAGCGGGAAg < 2:53688/248‑1 (MQ=255) cGATAGGAAACGCGGGCATTACCGTCAGGAAGACGTCACCGTCACGCATTGCACACTGCCGGGCGGAGTAATATCCAGCGAAGCGCAGGTTGGAATGGGTAACCCCCACACCTTGCGGTCGGGAGGTGGTGCCGGAGGTGAAGGGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCTGCGGGAAGt < 2:382844/251‑1 (MQ=255) aaaCGCAGGCATTACCGTCAGGTAGACGTCATCGTCCCGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACCCCTTTCGGTCGGGAGGTGGGGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACAt < 1:77552/251‑1 (MQ=255) aCGCAGGCATTCCCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCt < 1:477460/251‑1 (MQ=255) cgaaggaatacccggcgggTAGACGTCCTCGTCACGCAGTGCACCCGGCCAGGCGGAGTAAAATCCAGCGAGGCGCAGGTTGTAAGGGGTAATCCCCACCCCTTGCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGGCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTg < 2:444921/234‑1 (MQ=255) cGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGAGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGGATAA‑AA‑CAA‑GGGTGCAGGTTGTTGATTTTTTTGTTGAGTAAACGAAATTAAGGCATCATCAGCGGGAAgatgcacatcgg > 1:255573/1‑240 (MQ=255) gCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCCCCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGt < 1:58430/251‑1 (MQ=255) aGGCATTACCGTCAGGAAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGGATAGACC‑AAA‑GGGGCCGGGTGGTGGTTTTTTCGGTT‑AGTAAAACAACTCACGCCCACCTCAGCGGGAAGTGccccaaccgtc > 2:326086/1‑241 (MQ=255) ggCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAg < 1:265002/251‑1 (MQ=255) ttACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGGGCACAG‑AA‑CAA‑GGGGGCCGGTTGGTGGTTTTTCAGTTGAGGAAAAGAACTCACGGCATCATCAGCGGGAACTGCCACCTCCGTCCGGCa > 1:243636/1‑250 (MQ=255) tACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTTCATAG‑CA‑CCA‑GGGGGCAGGGTGGTGATTTTTTAGTTTGGTAAACGAACTCACGCCATCATCCGCGGGGAGTGCCACATCTGTCAGGCaa > 2:48683/1‑250 (MQ=255) cAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGcc < 1:223197/251‑1 (MQ=255) aaggttgtcGTCATCGTCGCGCGGTGCACACTGCAAGGCGGAGTAATTTCCAGCGAGGCGCAGGTTGTATTGGGTAACCACCACCCCTTTCGGTCGGGAGGGGGTGCGGAAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGcc < 1:322676/243‑1 (MQ=255) aTCGTCCCGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTgg < 1:5498/251‑1 (MQ=255) aTCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGCCGGGTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTgg > 1:47223/1‑251 (MQ=255) gTCACGCAGTGCACACTGCCAGGGGGAGTAATATCCAGCGAAGCGAAGGTTGAAATGGGTAATCACCACACCTTGCGGTCGGGAGGTGGGGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCCGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCAt < 1:255072/251‑1 (MQ=255) gCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCCTTCGGTCGGGAGGAGGCGCCGGAGGTGACGAGAATTTCCACCGTATCGTCAGTCGATAGCGGCGGGGCATAG‑CA‑CAA‑GGTGGGCGGATGTTGATTTTTCCGTTGAGGAAACGAACTCACGCCATCATCAGCGGGGAGTGCCCCCTCTCTCAGGCCAATACGCCGCAATTGAGTGGccacttcc > 1:297908/1‑244 (MQ=255) acTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGGTGTTGATTTTTCAGTTGGGTAAACGAACTCACGCCATCATCAGCGGGGAGTGCCACATCTGTCTGGCAAATGTGCCGCAATTGTGTGGCATCTTCCTGCTGAATc > 1:95330/1‑251 (MQ=255) cgggCGGAGTAATATCCAGCGAGGGGCAGGTNGTAATGGGTAACCCCCACCCCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTGCCTGCTGAATCTGTTg < 2:243342/249‑1 (MQ=255) cAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTg < 1:350172/251‑1 (MQ=255) cAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCATTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGGGCATCG‑CA‑CAA‑GGGGGGAGGGTGGTGATTTTTCCGTTGAGGAAACCGACTCCCGCCCTCATCCACGGGGAGTGCCACATCAGTCCAGCAAATGTGACGCAATTGAGGGGGATATTCCTGCTGGAACTGTTg > 1:476177/1‑251 (MQ=255) atatCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CAACAA‑G‑TGGCCGGTTGTTTATTTTTCAGTTGAGTAAACGCACTCACGCCATCATCAACGGGAAGTGCCACATCTGTTCGGCAAAAGAGCCGCCATTGATTGGCCTCTTTCTGCTTAATCTGTTGGTACATa > 1:385684/1‑247 (MQ=255) tCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGGAGGTTGTTGATTTTTTAGTTGAGTAAACGAACTCACGCCCTCATCAGCGGGGAGTGCCACATCTGTCAGGGAAATGGGCCGCAATTGAGGGGCAt > 1:191454/1‑218 (MQ=255) ccAGCGAAGCGCAGGTTGTAATGGGTCATCCCCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGCATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑AA‑CAA‑GGTGGCAGGGTGTTGATTTTTCAGCTGTGTAAACGAACTCACGCCATCATCCACGGGAAATGTCACATCTGTCAGGCAAATGTGCCGCAAATGAGAAGCATCGTTCTGCTGAATCTGTTGGTACATAGGaatga > 2:315647/1‑246 (MQ=255) cAGCGAAGCGCAGTTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAAt < 1:78014/251‑1 (MQ=255) cAGCGAAGCGCAGGTTGTAAGGGGTAATCGCCACTCCTTTCGGTCGGGAGTTGTTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAAt < 1:383023/251‑1 (MQ=255) gcAGTTTGTAATGGGTAATCACCACCCCTTTCGGGCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCTCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACAGAGGATAGAATTGCGCACTg < 1:340652/251‑1 (MQ=255) gcAGGTTGTAAGGGGTAATCACCCCACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTg < 2:47223/251‑1 (MQ=255) aGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑ACA‑GGTGGCAGGTTGTTGATTTTTTAGTTGAGTAAAAGAACTCACGCCAACATCAGCGGGAAGTGCCACAACTGTCAGGCAAAAGTGCCCCCATTGAGTGGCATCTTCCTGCTGAAACTGTTGATACATCGGATAGAATTGCGCAccg > 2:336405/1‑247 (MQ=255) gtaagggttAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACca < 1:313791/243‑1 (MQ=255) gTAATGGGTAATCCCCACCCCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCAcc < 1:27467/250‑1 (MQ=255) tAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGTTAGAATTGCGCCCTGGGCACca > 1:116183/1‑250 (MQ=255) aTGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCACAG‑CA‑CAA‑GGGGGCAGGGTGTTGGTTTTTCAGTTGAGGAAACGAAATAACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGGAAATGTGGCGCAATTGAGGGGAATCTTCCTGCTGAATTTGTTGATACATAGGATAGAATTGCGCAATGGTCCCcagc > 1:412364/1‑250 (MQ=255) caccacACCTTTCGTTCGGGAGTTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTGCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGcc < 1:198285/250‑1 (MQ=255) accacACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGGAGGGTGTTGAATTTTCAGTTGAGTAAAAGAACTCACGCCATCATCAGCGGGAAGTGCCACCTCTGTCAGGCAAATGTGGCGCAATTGAGGGGCATCTTCCTGCTGAATCTGTTGATACAAAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTg > 1:452613/1‑251 (MQ=255) cccccccttgcgggggggAGGGGGTGCCGGGGGGGAAGAAAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTgg < 2:153159/236‑1 (MQ=255) gcggtgggtaggaggtgCCGGAGGGTAGGAGATTTTCCGTGGTAGCGGCAGGCGGTAGCGGCGGTGCATAG‑TA‑CAA‑AGTGGCAGGTTGTTGAGTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCTGGCAAAGGTGCCGGAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCTGAAGCAGGCACGTCTTGCTATTTTga < 2:437908/238‑2 (MQ=255) gtcggGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAgg < 1:349678/251‑1 (MQ=255) tcggGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGCAGGTTGTTGATTTTTCAGTTGAGGAAACGAACTCACGCCATCATCAGCGGGGAGTGCCACATCTGTCAGGCCAATGGGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGGTAGAATTGCGCCCTGGTNCCCAGCAAGACCGCCCGGCTATTTTTCAggg > 2:239305/1‑250 (MQ=255) aGGTGGTGCAGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCACAATCAGCGGGACGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCAc < 2:122571/251‑1 (MQ=255) tgCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCCTAG‑CA‑CAA‑GGGGGAAGGTTGTTGATTTTTCAGTTGAGTAAAAGAAATCACGCCAACATCAGCGGGAAGGGCCACATCTGTCAGGCAAATGTGCCGCAATGGAGGGGCATCTTCCTCCTGAATCTGTTGATACATAGGATAAAATTGCGCACTGGTCACCAGCAGGGACTCCCGGATATTTTGCaaggtccccacgctt > 1:299472/1‑237 (MQ=255) gCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCttt > 1:131415/1‑251 (MQ=255) gCCGGAGGTGAAGAGAATTTCCGCCGCCTCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTTAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGCGCCCCAATTGAGTGGCATCTTACTGCTGAATCCGTTGATACATTGGATAGAATTGTGCACTCGTTAACAGCAGGCACGCCCGGCTATTTTGCAGGAACCAAGCGCttt > 1:97916/1‑251 (MQ=255) ccGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CT‑CAA‑GGAGGCAGGTTGTTGCTTTTTCAATTGAGTAAACGAAATCACGCCATCATCAGCGGGAAGTGCCACAACTTTCAGGCCAATGTGCCGCAATTTAGTGGCATCTTTTTCCTGAATCTGTTGATACATAAGATAGAATTGTGCACTCGTCACCAGGAGGCACCCCCGGCTATTTTGCAGGGTCCACGCGCTTTc > 1:143098/1‑251 (MQ=255) cGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CC‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTcc > 1:295313/1‑251 (MQ=255) ggAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCt < 1:234531/251‑1 (MQ=255) gggggaagaaAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTTGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACTCGCTTTCCTCg < 2:275761/247‑1 (MQ=255) tCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAggcggg < 2:153035/250‑1 (MQ=255) cGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTTCCGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGGTAATCGGc > 1:297527/1‑251 (MQ=255) gTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGCAGGGTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCa > 1:11184/1‑250 (MQ=255) gATAGCGGCGGTGCATAG‑CA‑CAA‑GGGGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGCACTCACGCCATAATCAGCGGGGAGTGCCCAATCTGTCAGGCAAATGTGCCGCAATTGAGAGGGCTCTTCCCGCTGGATCCGTTGATACATAGGCTAGAATTTCGCACTGGTCACCAGCAGGCACGCCCGGCTATTTTGAAGGGTCCACCCGCTTTCCTCGCACCACCGGCGGGGGTTTATccgccacacaat > 2:387820/1‑240 (MQ=255) cggcggTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCATAATCgcgc > 1:402537/1‑251 (MQ=255) gTGCATAT‑CA‑CAA‑GGGTTCAGGTTGTTGATTTTTCAGTTGCGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCATGCAAATGTGCCGCAATTGAGTTGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCTCGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCCCGCACAACATGCGGGCGTTAATCGGCACCATAATCGCGCCAAtt < 2:385903/251‑1 (MQ=255) aTAG‑CA‑CAA‑GGTGGCTGGTTGGTGATTTTGCAGTTGAGTCCACCAACCCACGCCATAATCAGCGGGACGTGCCACATCTGTCAGGCAAATGTGCCGCAATCGAGTGGCACCTTCCTGCTGAATTTGTTGATACATAGGATAGCATTGCGCACTCGAAACCAGCCGTCACGCCTGGCTGTTTTGCAGGTTCCACGAGCTTTCCTCGCACCACAAGCGGCCGTTAATccaccccagaagccgccccatttttg > 2:50334/1‑226 (MQ=255) aG‑CA‑CAA‑GGTTGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGGGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCATAATCGCGCCAATTTTTGcc < 1:477627/251‑1 (MQ=255) g‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCATAATCGCGCCAATTTTTGcc > 1:45545/1‑250 (MQ=255) acgaa‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGATGTGCCACATCTGTCAGGCAAATGTGCCGCAAGTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCATAAACGCGCCAATTTTTGCCAg < 2:401861/248‑1 (MQ=255) a‑caA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCATAATCGCGCCAATTTTTGCCAGc < 1:167267/251‑1 (MQ=255) aa‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCATAATCGCGCCAATTTTTGCCAGccc < 1:239657/251‑1 (MQ=255) tGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGTCGTGCGTTAATCGGCACCATAATCGCGCCAATTTTTGCCAGCCCGAAc > 2:375509/1‑251 (MQ=255) tGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCATAATCGCGCCAATTTTTGCCAGCCCGAAc > 1:454907/1‑251 (MQ=255) | CCAGCACAAAGGTGGCCCCGGCAGAAAACGCCGCCATCGCCGCAGTACACTGGCAATCGATATGAAACGCAGGCATTACCGTCAGGTAGACGTCATCGTCACGCAGTGCACACTGCCAGGCGGAGTAATATCCAGCGAAGCGCAGGTTGTAATGGGTAATCACCACACCTTTCGGTCGGGAGGTGGTGCCGGAGGTGAAGAGAATTTCCGCCGTATCGTCAGTCGATAGCGGCGGTGCATAG‑CA‑CAA‑GGTGGCAGGTTGTTGATTTTTCAGTTGAGTAAACGAACTCACGCCATCATCAGCGGGAAGTGCCACATCTGTCAGGCAAATGTGCCGCAATTGAGTGGCATCTTCCTGCTGAATCTGTTGATACATAGGATAGAATTGCGCACTGGTCACCAGCAGGCACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGGCACCATAATCGCGCCAATTTTTGCCAGCCCGAAC > NC_000913/37089‑37588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |