| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 565,054 | 44181 bp→TGA | [intD]–insL2 | 52 genes [intD], renD, insE3, insF3, renD, emrE, ylcJ, ybcK, ybcL, ybcM, ylcH, ybcN, ninE, ybcO, rusA, ylcG, quuD, nmpC, insH2, nmpC, essD, rrrD, rzpD, rzoD, borD, ybcV, ybcW, ylcI, nohD, tfaD, tfaX, appY, ompT, envY, ybcH, nfrA, nfrB, cusS, cusR, cusC, cusF, cusB, cusA, pheP, ybdG, nfsB, ybdF, ybdJ, ybdK, sokE, hokE, insL2 |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 565054 | 609234–608013 | 42960–44181 | 60 [0] | [0] 60 | [intD]–insL2 | [intD],renD,insE3,insF3,renD,emrE,ylcJ,ybcK,ybcL,ybcM,ylcH,ybcN,ninE,ybcO,rusA,ylcG,quuD,nmpC,insH2,nmpC,essD,rrrD,rzpD,rzoD,borD,ybcV,ybcW,ylcI,nohD,tfaD,tfaX,appY,ompT,envY,ybcH,nfrA,nfrB,cusS,cusR,cusC,cusF,cusB,cusA,pheP,ybdG,nfsB,ybdF,ybdJ,ybdK,sokE,hokE,insL2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 565053 | 0 (0.000) | 60 (0.990) +TGA |
54/486 | 0.0 | 100% | coding (926/1164 nt) | intD | putative integrase |
| ? | NC_000913 | 609235 = | 0 (0.000) | noncoding (1229/1345 nt) | IS186 | repeat region | |||||
GCAAATTGAACTGGCTTTTAAGCGGCTCAAAAGTTTGCTGCACCTGGATGCTTTGCGTGCAAAGGAACCTGAACTCGCGAAAGCGTGGATATTTGCTAATCTACTCGCCGCATTTTTAATTGACGACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACA > NC_000913/608991‑609475 | agttacgccttctttatatcctccataatttcagagtgggacctatttgggacattatcaccaaaaatgtcgtctattttcctcgcattctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactaaatcagccagcttgccccggtgtgtctgaggtcatggaaacggaaatctttgaGACAGt > 2:288806‑M2/245‑250 (MQ=255) gttacgccttctttatatcctccataatttcagagtgggacatatttgggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTAt > 1:275549‑M2/244‑251 (MQ=255) gccttctttatatcctccataatttcagagtgggacatatttgggacattatcaccgaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTg > 1:347455‑M2/239‑251 (MQ=255) ctttatatcctccataatttcagagtgggacatatttgggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGc > 1:262610‑M2/234‑251 (MQ=255) cagagtgggacatatttgggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTga > 1:202523‑M2/214‑248 (MQ=255) agtgggacatatttgggacattatcaccacacctgtcgtctattttcctcgcatgctctgtcaaatcattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagcaagcttgcccaggtgtgtctgaggtcatggacacggaaatctttgaGACAGTATCCCTGACCGCCTACAAAACGCAATTGAAGAAcg > 1:315764‑M2/211‑251 (MQ=255) ggacatatttgggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAAcgcg > 2:307747‑M2/207‑249 (MQ=255) ggacatatttgggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑g < 1:288806‑M2/45‑1 (MQ=255) atatttgggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCAt > 1:472279‑M2/203‑251 (MQ=255) atttgggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACa < 1:101760‑M2/23‑1 (MQ=255) atttgggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACa > 2:101760‑M2/201‑223 (MQ=255) atttgggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccattccctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaccggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGAGA‑ggcagcg > 2:205577‑M2/201‑248 (MQ=255) atttgggacattatcaccaaaaatgtcgtatattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCg > 1:386739‑M2/201‑251 (MQ=255) gggacattatcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCt < 1:340365‑M2/54‑1 (MQ=255) cattaacaccaaaaatgtcatctattttcctcgcatgctctgtaaaatgattaggcgcaagttgagcataccttcgaaccatttctatggtctcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtcggatgtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAact < 2:316894‑M2/59‑2 (MQ=255) atcaccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGc > 1:136518‑M2/189‑251 (MQ=255) ccaaaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCg < 2:136518‑M2/67‑1 (MQ=255) aaaatgtcgtctattttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAgg > 1:149509‑M2/182‑251 (MQ=255) aaatgtcgtctattttcctcgcatgctctggcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatggtacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGc < 1:58684‑M2/71‑1 (MQ=255) aaatgtcgtctatattcctcgcatgctatgtcaaatgattaggcgccaggtgagcatacctacgaaccatttctattgcctcccatccgcccatttcctgaagcactgatactggtacgcctgactaaatcagccagcttgcccaggtgtgtctgagttcatggaaacggaaatctttgaGACAGTATCCCTTCCCGCCTACAAAACGAAATTGAAGAACGCGA‑GGCATCGTCTTAAAGAGGCCccgaagc > 2:383402‑M2/181‑248 (MQ=255) attgtcctcgcgggctcggtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaatcactgataatgtgacgcctgactgaatcagccagcttgcccaggtgtggctgaggacatggaaactgtaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGATGTCA‑CATCTTAACGATGCACCGAGTCGTCGCAttct < 2:387042‑M2/81‑1 (MQ=255) tttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCAttcttc > 1:446217‑M2/168‑250 (MQ=255) ttcctcgcattctctgtcaaatgattaggcgcaaggtgcgcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACTAGGCACCGAGGCGTCGCATTCTTCa < 2:117888‑M2/84‑1 (MQ=255) ttcctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCAttcttc > 1:143952‑M2/167‑249 (MQ=255) cctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCg > 2:434820‑M2/165‑239 (MQ=255) cctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCg < 1:434820‑M2/75‑1 (MQ=255) ctcgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATg > 1:342923‑M2/164‑251 (MQ=255) tagcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccttttctatggactcccatccgcccatttcccgaagcactgataatggggcgcctgactgcatctgcccgcttgccctggtttgtctgaggtcttggaaacggcaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑CGCATCGTCTTTACGATGCACCTAGGCctcgcattcttctgttgg > 2:361593‑M2/163‑245 (MQ=255) cgcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGt < 1:40882‑M2/90‑1 (MQ=255) gcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGc > 2:147506‑M2/161‑178 (MQ=255) gcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGc < 1:147506‑M2/18‑1 (MQ=255) gcatgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGtt > 1:257761‑M2/161‑251 (MQ=255) atgctctgtcaaatgattaggcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCa < 1:474087‑M2/93‑1 (MQ=255) gcgcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTAt > 1:173293‑M2/139‑251 (MQ=255) gcaaggtgagcatacctacgaaccatttctatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATgg > 1:465007‑M2/137‑251 (MQ=255) caaggtgagcattcctacgaaccatttctatggtctcccatccgcccatatccggaagcactgataatgggactcctgatcgaatcagccagcttgcccaggggtggctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATGGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGAGGGTTCAACCCATAAGTTAGCGCTTATggg < 2:403887‑M2/116‑1 (MQ=255) acctacgaaccatttcaatggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagacagcttgcccaggtgtgtctgaggtcatggaaacggagatctttgaGACAGTATCCCTGACAACCTACACAACGCAATTGAAGAACGCGC‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGc > 1:175749‑M2/124‑251 (MQ=255) gaaccatttctatggactaccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATcc > 2:405022‑M2/118‑251 (MQ=255) atggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgtcaggt > 1:40621‑M2/107‑251 (MQ=255) atggactcccatccgcccatttcctgaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgtcaggt < 2:275549‑M2/145‑1 (MQ=255) gaagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTac < 2:379795‑M2/170‑1 (MQ=255) aagcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTac > 2:155048‑M2/81‑250 (MQ=255) gcactgataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGTTCAGGATGGTAAGGCACCTGCTTTACACt < 1:452643‑M2/173‑1 (MQ=255) gataatgggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTc < 1:24569‑M2/176‑1 (MQ=255) gggacgcctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaagctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGGCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTg < 2:386739‑M2/183‑1 (MQ=255) gacgcctgactgtatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatcttggaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGTCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTc < 2:300704‑M2/186‑1 (MQ=255) ctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTa > 2:29581‑M2/61‑172 (MQ=255) ctgactgaatcagccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTa < 1:29581‑M2/112‑1 (MQ=255) agccagcttgcccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGc > 1:345458‑M2/50‑251 (MQ=255) agccagcttgcccaggtgtgtctgagggcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGGCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGc < 2:377337‑M2/202‑1 (MQ=255) cccaggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTAcc < 1:431587‑M2/212‑1 (MQ=255) gggtgtttctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTGCAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTGAACGAGGCTCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTATCGCTTATGTGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGTACCTGCTTTACACTTTCGCCCGTGGTCATTGATGGCTGCGGGGGAATCGTACCAGa < 2:485201‑M2/215‑1 (MQ=255) aggtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGa < 1:136976‑M2/215‑1 (MQ=255) gtgtgtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtg > 1:380673‑M2/35‑251 (MQ=255) gtctgaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgttgt < 1:386529‑M2/221‑1 (MQ=255) ctgaggtcatggaaaaggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGCTGGCTGCGGGCGAATCGTACCAGATGTTGTc > 2:66273‑M2/29‑250 (MQ=255) gaggtcatggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTc < 2:202523‑M2/222‑1 (MQ=255) ggtgtatggaaacggatatctttgaGACAGTATCCCTGACAGCCTACAAAAAGCAATGTAAGAACGCGA‑TGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGGTGGTTCAACCCTTAAGTTAGCGCGGATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCGTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTATCAAtt < 2:425336‑M2/226‑1 (MQ=255) catggaaacggaaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAAt < 2:465007‑M2/229‑1 (MQ=255) aaatctttgaGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGCTGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTNCACGATGTTGTCAATTAATCGTGTTGgcacc > 2:218942‑M2/11‑250 (MQ=255) | GCAAATTGAACTGGCTTTTAAGCGGCTCAAAAGTTTGCTGCACCTGGATGCTTTGCGTGCAAAGGAACCTGAACTCGCGAAAGCGTGGATATTTGCTAATCTACTCGCCGCATTTTTAATTGACGACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA‑GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACA > NC_000913/608991‑609475 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |