Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,235,905 16376 bp→AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC yjbEmalM yjbE, yjbF, yjbG, yjbH, yjbT, psiE, xylE, malH, malG, malF, malE, malK, lamB, malM

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4235905 4252280 16376 47 [0] [0] 53 yjbE–malM yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE,malH,malG,malF,malE,malK,lamB,malM

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42359040 (0.000)36 (0.740)
+AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC
33/388 0.2 100% intergenic (+497/‑2) pgi/yjbE glucose‑6‑phosphate isomerase/uncharacterized protein YjbE
?NC_000913 4252281 = 0 (0.000)intergenic (+1807/‑225) malM/ubiC maltose regulon periplasmic protein/chorismate lyase

AAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTA  >  NC_000913/4235656‑4236147
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                   
aaaTAGATTTTTATTCGTTGTTTATTTCTGATAATACGCAGAGTAATTGCTTTATTTTGTATTATAAGTTTATGATTTTTAATGTTATTTAAATATAAGTTCAAAATCATATGTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATATCCCGCGCCGTAATTCCCATGCCTTATTTGTGTCTACTCCATCACGACCGAAATGTTTTTGTGTAAATCTACATTCATTCTATGAAGCGAAATTGtaa                                                                                                                                                                                                                                                   <  2:39340/251‑3 (MQ=255)
 aaTAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaag                                                                                                                                                                                                                                                  <  2:255435‑M1/251‑4 (MQ=255)
    aGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCAGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagta                                                                                                                                                                                                                                                >  1:48112‑M1/1‑245 (MQ=255)
          ttAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaa                                                                                                                                                                                                                                          <  1:321872‑M1/250‑12 (MQ=255)
                    tttATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGCTTTTTATTGTTATTTAACTATAAGTTGAAACTTATATTTCATCTTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGACGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCACTGAAGGGAAATTGTaagtaaaggaaaacatcaacgt                                                                                                                                                                                                                               >  1:220206‑M1/1‑229 (MQ=255)
                              aaaaTACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAATCTTATATTTGATATTCATTCCAATTATCCTAAAACGTCAGCGCTAATGGCCCGCGCCGTAATTCGCATGCTTTAGTTGTTTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaaga                                                                                                                                                                                                                     <  1:28100‑M1/251‑33 (MQ=255)
                              aaaaTACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATACTAAAACGCCATCGTTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaa                                                                                                                                                                                                                        >  1:211250‑M1/1‑219 (MQ=255)
                               aaaTACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTACATATAAGTTGATACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATAGCTAATTCTCTGCGCCGTAATTCGCATGCTTTAATTGTGTATACTCGATCCCGCCCGAATTGTTTTTGGTTAAATCTCATTTCATTCAATGATGGGAAATTGAaagtaaatgaaaacataaactttcgcaaaaga                                                                                                                                                                                                                     >  2:111457‑M1/1‑218 (MQ=255)
                                  tACGCAGATTAATTGATTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGCAACTTATCTTTGCTATTCATTCCAATTATACTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCTCGCCCGACATGTTTTTGGGTAAATCTACATTCATTCAATGACGGGAAATTGTacgtaaaggacaacatcaacgctcgcagaagacaat                                                                                                                                                                                                                 >  1:168498‑M1/1‑215 (MQ=255)
                                  tACGCAGATTAATGGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCATTTATCCTAATATGACATCGCTCATTCCCCACGCTCAAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCACTTCATTCAATGATGGTAAATTGTaattaaaggaaaacatcaccgttcacacaagaaaat                                                                                                                                                                                                                 >  2:65582‑M1/1‑215 (MQ=255)
                                            aaTTGATTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCTTTTCAATTATCCTAAAACGCCATCGCTAATTACCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGCAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAACTTGTcagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgattttc                                                                                                                                                                                                       >  2:274497‑M1/1‑205 (MQ=255)
                                                                 aaGTTTATGATTTTTATTGTTATTTCAATATAAGTTGAAACTTATCTTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGACATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaac                                                                                                                                                                                  >  2:435899‑M1/1‑184 (MQ=255)
                                                                  aGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaac                                                                                                                                                                                  >  1:441403‑M1/1‑183 (MQ=255)
                                                                   atttaTGATTTTTATTGTTATTTAAATATAAGTTGACACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAACTTGTaagtaaaggataacatcaacgttcgcaaaagcaaatgccgatttgcggccgctaagtaaaggaaaaca                                                                                                                                                                                 >  2:273338‑M1/2‑182 (MQ=255)
                                                                         gATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgt                                                                                                                                                                          >  1:84874‑M1/1‑176 (MQ=255)
                                                                               tATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctgg                                                                                                                                                                    >  1:131323‑M1/1‑170 (MQ=255)
                                                                                                 aGTTGAAACATATAATAGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCACGCGCCGTACTTCGAATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTGAATCTCCATTCATTCAATGAAGGGAAATTGTaagtagaggaaaccatcaacgtgctcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaacgttcctggcatccttgacggtgcagc                                                                                                                                                  >  2:156697‑M1/1‑152 (MQ=255)
                                                                                                     gAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccct                                                                                                                                              >  1:463702‑M1/1‑148 (MQ=255)
                                                                                                      aaaCTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatccccgttcctgcaatcctggccggtgatgcccctc                                                                                                                                             >  2:427203‑M1/1‑147 (MQ=255)
                                                                                                                       tcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagc                                                                                                                            >  1:108149‑M1/1‑130 (MQ=255)
                                                                                                                        cattcCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagc                                                                                                                            >  1:161226‑M1/1‑129 (MQ=255)
                                                                                                                             cAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggc                                                                                                                      >  1:110548‑M1/1‑124 (MQ=255)
                                                                                                                                  aTCCTAAAACGCCATCGCTAATTCCCCGCGCCATAATTCGCATGCTTTAGTTGCGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTacgtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacgatcatgcccctacggttgccctcgccagcacaggcatcgg                                                                                                                 >  2:406811‑M1/1‑119 (MQ=255)
                                                                                                                                   tCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacattaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggt                                                                                                                >  1:151228‑M1/1‑118 (MQ=255)
                                                                                                                                        aaaCGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagc                                                                                                           >  2:86173‑M1/1‑113 (MQ=255)
                                                                                                                                             ccATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgta                                                                                                        >  1:123057‑M1/1‑108 (MQ=255)
                                                                                                                                             acaTCGCTCATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgta                                                                                                        >  1:123053‑M1/2‑108 (MQ=255)
                                                                                                                                                 cGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatccccgttcctggcatcctggacggtgatacccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttc                                                                                                  <  1:336534‑M1/251‑148 (MQ=255)
                                                                                                                                                           ccGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgccccttcggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttt                                                                                        <  1:58889‑M1/251‑158 (MQ=255)
                                                                                                                                                              cgcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttac                                                                                     >  1:89037‑M1/1‑91 (MQ=255)
                                                                                                                                                               gcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatccccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttacc                                                                                    <  2:87697‑M1/251‑162 (MQ=255)
                                                                                                                                                                  gTAATTCGCATGCTTTAGTTGTGTATAATCGATCCCGCCCGTCATGTTTTTGGGTAAATCTCCATTCATTCACTGAAGGGAAATTGTaagtaaaggaaaacttcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctaaggttgccctcgccagcacgggcatcggtaaagcgtacggttcaacatcgttttaccact                                                                                 >  2:470222‑M1/1‑87 (MQ=255)
                                                                                                                                                                       tCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatg                                                                            >  1:374183‑M1/1‑82 (MQ=255)
                                                                                                                                                                        cGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgc                                                                           <  2:374183‑M1/251‑171 (MQ=255)
                                                                                                                                                                        cGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgc                                                                           >  1:200690‑M1/1‑81 (MQ=255)
                                                                                                                                                                                ttAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgt                                                                     <  1:130020‑M1/249‑177 (MQ=255)
                                                                                                                                                                                               cGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgt                                                     >  2:327079‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                gATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcaaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtat                                                   >  2:433471‑M1/1‑57 (MQ=255)
                                                                                                                                                                                                   cccgcccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattag                                                <  2:110548‑M1/251‑198 (MQ=255)
                                                                                                                                                                                                       cccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgctttgcggccgctaagtaaaggaaaacgtcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatc                                             >  2:12404‑M1/1‑50 (MQ=255)
                                                                                                                                                                                                         caaaatgTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaactttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggtatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcact                                          <  2:415233‑M1/249‑204 (MQ=255)
                                                                                                                                                                                                                              tcCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgctttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggccggtgatgctcctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcccttaatttgctttacatctcccg                     >  2:208509‑M1/1‑27 (MQ=255)
                                                                                                                                                                                                                                     attcaATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacac              >  2:376070‑M1/1‑20 (MQ=255)
                                                                                                                                                                                                                                     attcaATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacac              >  1:54936‑M1/1‑20 (MQ=255)
                                                                                                                                                                                                                                         aaTGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacactttt          <  2:441403‑M1/251‑236 (MQ=255)
                                                                                                                                                                                                                                          aTGAAGGGAAATTGTaagtaaaggaaaacattaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttc         <  2:151228‑M1/251‑237 (MQ=255)
                                                                                                                                                                                                                                                 gAAATTGTaagtaaaggaaaacatcaacgttngcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaactcttttctgcgata  <  2:211250‑M1/251‑244 (MQ=255)
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AAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTA  >  NC_000913/4235656‑4236147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: