| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,578,950 | Δ6,094 bp | [yhhW]–[yrhB] | [yhhW], yhhX, ryhB, yhhY, yhhZ, yrhA, insA6, insB6, yrhA, yrhD, [yrhB] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3578950 | 3585043 | 6094 | 38 [0] | [0] 38 | [yhhW]–[yrhB] | [yhhW],yhhX,ryhB,yhhY,yhhZ,yrhA,insA6,insB6,yrhA,yrhD,[yrhB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3578949 | 0 (0.000) | 37 (0.600) | 34/492 | 0.4 | 100% | intergenic (‑223/+1) | gntR/yhhW | DNA‑binding transcriptional repressor GntR/quercetin 2,3‑dioxygenase |
| ? | NC_000913 | 3585044 = | 0 (0.000) | intergenic (+1/+37) | yrhB/ggt | putative heat shock chaperone/glutathione hydrolase proenzyme | |||||
GAAGTACGGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCA > NC_000913/3578702‑3579185 | gAAGTACGGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCACGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAATGCAGGCTTCAAAGATGCCGTTGAGTTcaa < 2:487758‑M1/251‑4 (MQ=255) gTACGGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaat > 1:468413‑M1/1‑245 (MQ=255) aCGGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTATTCTAGTTTAACAAGCACACATCAGAACCTTCCCGGGGAATACAGCGCTTGTTTACATTTATTATATATACACTAATTCAAATGCATCACATTGTGCTAACGACGCGGCAAAACACCGTAAGCGTACATCAGCAACCGACAGGAGCGGGCGAGGAAGCCTGCAAAAAAGAAAGCTGCACAGATGCCGTTTAGttcaaaata > 2:151175/1‑243 (MQ=255) tttcttttTCAGCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGCGTTcaaaatagccctctt < 2:404151‑M1/250‑16 (MQ=255) ttcttttTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcc > 1:50311‑M1/1‑234 (MQ=255) tcttttTCATCGTCCTGAAGGTACAAAAGANATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcc < 2:227888‑M1/250‑18 (MQ=255) tcgttttcatCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGGTTACAATGATGAGATATACACTAAATCAATTGCATCGCATTTTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCGGTTGAGTGcaaaatagccctctacc < 2:167983‑M1/247‑18 (MQ=255) gAAGGAACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACACCGGACGCGTACATCAGCACGCGACCGGCGCGAGCGAGGAAACCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccatcttcccccgcagagtgccgct > 2:23106‑M1/1‑217 (MQ=255) aaGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGAGAGCGAGGAAGCCTGCAAAAAGGCCGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcacacgaagaggaccgcta > 1:36727‑M1/1‑216 (MQ=255) aCAAAAGAGATAGATTCTCTTAGTTTAACACAGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGACAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGATGAAGCCTGCAAAAAGGCAGTCTTCACAGATGCCGTTGAGTTcaaaatacccctcttcccacgaaacgggccgctaacctt > 2:1049‑M1/1‑211 (MQ=255) aaaaGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagt > 1:395978‑M1/1‑209 (MQ=255) aaaaGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagg > 1:112053‑M1/1‑209 (MQ=255) gatagatTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccc > 1:245342‑M1/1‑203 (MQ=255) atagatTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCACTTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaacttaggaccccgc > 2:333771‑M1/1‑202 (MQ=255) ttAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccac > 1:158455‑M1/1‑187 (MQ=255) tAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTACTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGCCAAAACCCCGTAAGCGTACATCAGCACGCGAACGGAGCGAGCGAGGAAGCCTGCAACAAGGCAGGCTCCAAAGAGGCCGTTGTGATcaaaatagcactcttcccacgcagcgggccgctaaccttagtacccagccgttaaatcatccacc > 2:268286‑M1/1‑186 (MQ=255) aGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggat > 1:290654‑M1/1‑171 (MQ=255) ttCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGATcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcacccaccgagcgcgggacggatgcgcgg > 2:367724‑M1/1‑165 (MQ=255) cccGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtt > 1:372990‑M1/1‑163 (MQ=255) cccGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgt > 1:91491‑M1/1‑163 (MQ=255) cGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtac > 1:140234‑M1/1‑161 (MQ=255) aaaaCAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactc > 1:480723‑M1/1‑156 (MQ=255) aaTTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggctgcgccgtacaactcaccgtccggcccaaccat > 1:214410‑M1/1‑138 (MQ=255) acTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggcagctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccgacccaaccataatgctttgtgtactc > 1:222181‑M1/1‑123 (MQ=255) aTCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccat > 1:349165‑M1/1‑118 (MQ=255) aaTTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgc > 1:482908‑M1/1‑115 (MQ=255) tGCATCGCCTTGTGCTAACGACGCGGCCAAACCACGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGGTGCCGTTGCGTTcaaaatagccctcttcccacgaagagggccgctaaccttaggaccccgccgttaaatcctccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtaatgcccatcgcctc > 2:267687‑M1/1‑112 (MQ=255) gCTAACGACGCGGCAAAACCCCGGAAGAGTACATCAGCACGCGACCGCAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctcaccttagtaccccgacgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccact > 1:173989‑M1/1‑99 (MQ=255) cAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGCGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaacatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttccgcgccactttatgaccttttg > 2:203973‑M1/1‑86 (MQ=255) gCGTACATCAGCACGCGACCGGAGCGCGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgaactgcccatcgcctctttcagcgccacttgctgaccttttgattccagcagctt > 2:431908‑M1/1‑73 (MQ=255) aCCGGAGCGAGCGAGGCAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggcta > 1:100421‑M1/1‑56 (MQ=255) ggAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCAGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaacccgccgttaaatcatccaccgagcgcgggtaggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgactctttcagagccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaacc > 1:181995‑M1/1‑53 (MQ=255) gggggagagccatgaaaaagggcagtcttcaaagtGGCCTTTGAGTAcaaaatgcccctctccccaagaagggggccgcacaccttattcccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaacccttttt < 1:236356‑M1/236‑205 (MQ=255) agGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgc > 2:366654‑M1/1‑43 (MQ=255) cAAAAAGGCAGGCTTCAAAGATGCCGTTGCGTTcaaaatagccatcttcccacgaagagggacgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacgcagctcg > 1:126970‑M1/1‑33 (MQ=255) aggcTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacgcagctcgtccggcaac > 1:85435‑M1/1‑24 (MQ=255) gcTTCAAAGATGCCGTTGAATTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgagccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactctctgaccttttgcttccagcagcttgagcgtagccgggctaaaccctttttcgacacgcagctcgtccgtcaaccc > 2:360505‑M1/1‑22 (MQ=255) aGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacgcagctcgtccggcaaccactgttgg > 2:177412‑M1/1‑15 (MQ=255) | GAAGTACGGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCA > NC_000913/3578702‑3579185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |