Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,985,842 Δ47,769 bp yqeG[idi] 39 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2985842 3033610 47769 76 [0] [0] 75 yqeG–[idi] yqeG,yqeH,yqeI,yqeJ,yqeL,yqeK,ygeG,ygeH,ygeI,insD4,insC4,ygeQ,glyU,actS,xdhA,xdhB,xdhC,ygeV,ygeW,ygeX,ygeY,hyuA,yqeA,yqeB,yqeC,mocA,ygfK,ssnA,ygfM,xdhD,xanQ,guaD,ghxQ,ygfS,ygfT,uacT,yqfG,yqfH,[idi]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 29858410 (0.000)75 (1.220) 63/492 0.0 100% intergenic (‑249/‑6) yqeF/yqeG putative acyltransferase/putative transporter YqeG
?NC_000913 3033611 = 0 (0.000)coding (547/549 nt) idi isopentenyl‑diphosphate Delta‑isomerase

ATCACAACCTCGCACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAAGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTTTGTTTAATTTGTAGATGATACGTTCAGATAATGTCTAATATTTGGTCTAAAGAAGAAACTCTGTGGAGTTTCGCGCTCTACGGCACAGCCGTTGGTGCAGGCACGCTCTTCCTTCCTATTCAGTTAGGTTCGGCAGGGGCTGTGGTCCTGTTTATTACTGCTCTGGTCGCCTGGCCTTTAACATATTGGCCACATAAAGCCTTGTGCCAGTTCATCCTCTCATCAAAAACATCAGCAGGTGAAGGGATAACGGGCGCGGTAACACACTACTAT  >  NC_000913/2985591‑2986089
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                        
ataacaACCTCGCACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATATCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTc                                                                                                                                                                                                                                                          >  2:371729/4‑251 (MQ=255)
  cacaACCTCGCACCAATTAACAGTGAAATAGTAAATGATTGTTAAATACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTAGCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCGCCAATAGAGGGGTAGATATGGCGTTAATCTTCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGAGACGTTCt                                                                                                                                                                                                                                                         <  2:126942‑M1/250‑2 (MQ=255)
   acaACCTCGAACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTCATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGCCACGTAGGGTTTGCAACCAATAACCCACCAATAGAGGGGAAGATAGGGCGTTAATCTCCCATACTTAACCTAGTTTATGGTAAATTGCCCTCAATTCTGTTTAATTTATAGATGATACGTTCta                                                                                                                                                                                                                                                        >  1:477069‑M1/1‑248 (MQ=255)
     aaCCTCGCACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaa                                                                                                                                                                                                                                                      >  2:99457‑M1/1‑246 (MQ=255)
            cACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGAAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTCATTTGTAGATGATACGTTCtaaaaaaacccc                                                                                                                                                                                                                                              >  2:12344‑M1/1‑239 (MQ=255)
               cAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATCTGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGTTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCAGTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgac                                                                                                                                                                                                                                           <  1:156443‑M1/251‑16 (MQ=255)
               cAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATATAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTTGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgac                                                                                                                                                                                                                                           <  1:96294‑M1/251‑16 (MQ=255)
                    aaCAGTGCGATAGTAAATGATTGGTCATTCCAGTTATCTTAATTGTTTAAAAAAAGGGATTTTTATCACAAAGCAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATCGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTGTGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttt                                                                                                                                                                                                                                      >  2:34796‑M1/1‑231 (MQ=255)
                     aCAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGAGATTTTTATCACAAAAGAAATATGCCTGAGCAGCAGTTAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAACTTGCCCTACATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttac                                                                                                                                                                                                                                     >  2:34463‑M1/1‑230 (MQ=255)
                       aGTGCAATAGTAAATGATTGTTAATTACAGTAATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAACGAAATATTCCTGAGCAGCAGTCAGAGACATAACTTGCACGTAGGATTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTACCATACTTAACCTGGGTTATGGTAAATTGCCATCCCTTCTGTTTAATTTGTAGATGATACGTTAtaaaaaaaccccgacatttgccg                                                                                                                                                                                                                                   >  2:166427‑M1/1‑228 (MQ=255)
                        gTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATGCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccgg                                                                                                                                                                                                                                  <  2:364487‑M1/251‑25 (MQ=255)
                                    aTGATTGTTAATTACAGTTCTCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcat                                                                                                                                                                                                                      >  1:364389‑M1/1‑215 (MQ=255)
                                    aTGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcat                                                                                                                                                                                                                      >  1:486294‑M1/1‑215 (MQ=255)
                                      gATTGTTAATTACAGTTATCTTAAGTGGTTAAAAAAAATGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaatccccgacatttgccggggttttgagcatat                                                                                                                                                                                                                    <  2:132715‑M1/251‑39 (MQ=255)
                                        ttGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacg                                                                                                                                                                                                                  >  2:40564‑M1/1‑211 (MQ=255)
                                          gTTAATTACATTTATCTTAATTGATTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGAAGGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGAGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaacccgacatttgccggggttgtgagcataacgt                                                                                                                                                                                                                 >  2:469474‑M1/1‑209 (MQ=255)
                                          gTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgta                                                                                                                                                                                                                <  2:289982‑M1/251‑43 (MQ=255)
                                             aaTTACAGTTATCTGAATTGGTTGAAAAAATTGATGTTTATCACAAAGGAAAGATTCCTGAGCAGCAGTCAGTGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGGTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCAGTCTGTTTAATTTGTTGATGATACTGTCgaaaaaaaccccgacatttgccggggttgtgatcataacgtaaa                                                                                                                                                                                                              <  2:27701‑M1/250‑45 (MQ=255)
                                              aTTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgc                                                                                                                                                                                                            <  1:61745‑M1/251‑47 (MQ=255)
                                              aTTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgc                                                                                                                                                                                                            >  2:39735‑M1/1‑205 (MQ=255)
                                                           tAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttac                                                                                                                                                                                                   <  1:371729‑M1/247‑56 (MQ=255)
                                                             aTTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacg                                                                                                                                                                                             >  1:9541‑M1/1‑190 (MQ=255)
                                                              ttGTTTAAAAAATGTGATTTTTATCACAAAGGCAATATGCCTGAGCAGAAGTCAGAGCCATAACTGGCACGTAGGGTTTGCAACCACAAACCCACCAATAGCGGGGTAGATAGGGCGTTAATCTCTCATACTTAACCTGGTTTATGGTACATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgcaggggttgtgatcatcacgtaatgcttattttaccggacgc                                                                                                                                                                                            >  2:162452‑M1/1‑189 (MQ=255)
                                                               tGTTTAAAAAAAGTTATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACTTAGGGTTTTCAACCACTACCCCACCAATAGAGGGGTAGATAGGGCGGTAATCTCCCATACTTAACCTGGTTTATGTTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggtttggagcataacgtaatgcttattttaccggacgc                                                                                                                                                                                            <  2:412365‑M1/250‑63 (MQ=255)
                                                                     aaaaaaGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccg                                                                                                                                                                                     >  1:443122‑M1/1‑182 (MQ=255)
                                                                     aaaaaaGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccg                                                                                                                                                                                     >  1:216703‑M1/1‑182 (MQ=255)
                                                                          aGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaac                                                                                                                                                                                >  1:133227‑M1/1‑177 (MQ=255)
                                                                            tGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGAAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagaataacgtaatgcttattttacctgacgcatcgccgggaac                                                                                                                                                                                >  2:152686‑M1/1‑175 (MQ=255)
                                                                             gATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacaga                                                                                                                                                                             <  2:175264‑M1/251‑78 (MQ=255)
                                                                              aTTTTTATCCCAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccgggggtgtgagcctaacagaatgcttatttgaccggacgcatcgcctggaacaga                                                                                                                                                                             >  2:293‑M1/1‑173 (MQ=255)
                                                                              aTTTTTATCACAAAGGAACTATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaaccga                                                                                                                                                                             >  2:414934‑M1/1‑173 (MQ=255)
                                                                                ttttATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACACACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGATTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaacaaaccccgacatttgccggggttgtgagcataaagtaatgcttattttaccggacgcatcgccgggaacagaat                                                                                                                                                                           >  1:196554‑M1/1‑171 (MQ=255)
                                                                                   tATCACAAAGTAAATATGCCTGAGCAGCAGTAAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTGTATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggcgttgtgagcataacgtaatgcttattttaccggacgcatcgccggtaacagaataac                                                                                                                                                                        <  2:471725‑M1/250‑83 (MQ=255)
                                                                                    aTCACAAAGGAAATAGGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacg                                                                                                                                                                       <  1:218368‑M1/250‑84 (MQ=255)
                                                                                     tCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtc                                                                                                                                                                     >  1:410968‑M1/1‑166 (MQ=255)
                                                                                      cacaAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtc                                                                                                                                                                     <  1:118319‑M1/250‑86 (MQ=255)
                                                                                        caAAGTAAATATGCCTGAGCAGCAGGCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGTGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTTTAGATGATACGTTCtaaaaaaaccccgacatgtgccggggttgtgagcataacggaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcg                                                                                                                                                                  <  2:369410‑M1/251‑89 (MQ=255)
                                                                                          aaGGAAATATGACTGAGCAGCAGTCAGAGCCATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGAAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGACCTCCATTCTGTTTAATTTGTAGAGGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgagg                                                                                                                                                                 >  2:118254‑M1/1‑161 (MQ=255)
                                                                                              aaaTATGCCTGAGCAGCAGTCAGAGACATAANTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggt                                                                                                                                                            <  2:242286‑M1/251‑95 (MQ=255)
                                                                                              aaaTATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggt                                                                                                                                                            >  1:31707‑M1/1‑157 (MQ=255)
                                                                                              aaaTATGCCTGAGCAGCAGTCAAAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacctttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatgg                                                                                                                                                             >  1:331104‑M1/1‑157 (MQ=255)
                                                                                              aaaTATGACTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggt                                                                                                                                                            >  2:131873‑M1/1‑157 (MQ=255)
                                                                                                atatGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtat                                                                                                                                                          <  1:88996‑M1/251‑97 (MQ=255)
                                                                                                        gAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtgtggctgttg                                                                                                                                                  <  1:34796‑M1/251‑105 (MQ=255)
                                                                                                         agcagcAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggaatggctgttgg                                                                                                                                                 >  1:74543‑M1/1‑146 (MQ=255)
                                                                                                                gTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaaca                                                                                                                                           <  1:400319‑M1/250‑112 (MQ=255)
                                                                                                                gTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggggaaca                                                                                                                                           >  2:400319‑M1/1‑139 (MQ=255)
                                                                                                                 tCAGAGACATAACTGGCACGTAGGGATTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagc                                                                                                                                         >  1:253609‑M1/1‑138 (MQ=255)
                                                                                                                   agagACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatgtgatggctgatggtgaaccgca                                                                                                                                        >  2:458817‑M1/1‑136 (MQ=255)
                                                                                                                     agaCATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcatt                                                                                                                                      >  2:19828‑M1/1‑134 (MQ=255)
                                                                                                                         aTAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccat                                                                                                                                 >  1:181142‑M1/1‑130 (MQ=255)
                                                                                                                         aTAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccat                                                                                                                                 >  1:161931‑M1/1‑130 (MQ=255)
                                                                                                                               ggCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtc                                                                                                                           <  1:175762‑M1/251‑128 (MQ=255)
                                                                                                                                     tagggcttgcaaccACTAACCCACCAATAGAGGGGTAGATAGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtggaacaccttaccaaacgggcgataacc                                                                                                                    >  2:94128‑M1/7‑117 (MQ=255)
                                                                                                                                       gggtTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaa                                                                                                                   <  1:360265‑M1/250‑136 (MQ=255)
                                                                                                                                         gTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaatt                                                                                                                 <  2:159179‑M1/251‑138 (MQ=255)
                                                                                                                                                         ccaccaATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcg                                                                                                 <  1:414934‑M1/251‑154 (MQ=255)
                                                                                                                                                                    ggggTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagcc                                                                                       >  1:19572‑M1/1‑87 (MQ=255)
                                                                                                                                                                      ggTAGATAGGGCGTTAATCTCCCATTCTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatg                                                                                    <  2:274612‑M1/251‑167 (MQ=255)
                                                                                                                                                                          gATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataaagtcgcggatggtatggctgttggtgaacagcattaccataaggtcgataccaattcacagacctgctgtcggcgggaagccatgttcc                                                                                >  1:232022‑M1/1‑81 (MQ=255)
                                                                                                                                                                          gATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCATCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatgtgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcgtcggtaagccatgttcc                                                                                <  2:19572‑M1/251‑171 (MQ=255)
                                                                                                                                                                             aGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagt                                                                             >  1:207305‑M1/1‑78 (MQ=255)
                                                                                                                                                                              gtgccttcatctcccatACTTAACCTGGTTTATTGTAAATTGCCCTCCAGTCTGTTTAATTTGTAGATGATACGTTCtaaacacaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcaccgccgggaacagaataacgtcgcgtatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcgtcggtaagccatgttccattg                                                                            <  2:354174‑M1/243‑175 (MQ=255)
                                                                                                                                                                                  gTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctnctgtcggcgggaagccattttcccgtgcggt                                                                        >  2:246662‑M1/1‑73 (MQ=255)
                                                                                                                                                                                           ccATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattccca                                                                                                             <  1:36596‑M1/205‑142 (MQ=255)
                                                                                                                                                                                               aCTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTAtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggcacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagaactgctgtcggcggtaagccatgtttcagggaggtgacgtaatcttct                                                           >  2:465857‑M1/1‑60 (MQ=255)
                                                                                                                                                                                                        ggTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaac                                                  <  1:461492‑M1/251‑201 (MQ=255)
                                                                                                                                                                                                            tATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggggaacagaattaccatacgggcgataccaattccccgacctgctgtcggcggtaagcaatgttccagtgcggggacgtaatcttcatcgcagaacaacg                                              >  2:269331‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                             aTGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgtttcaatgaggtgacgtaaatttcatcgtagaacaacgc                                             >  2:124212‑M1/1‑46 (MQ=255)
                                                                                                                                                                                                             aTGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacagtcgataccaattcccagccctgctgtcggcggtaatccatgttccagtgcggtgacgtaaccttcatcgtagaacatcgc                                             >  2:47768‑M1/1‑46 (MQ=255)
                                                                                                                                                                                                                gTAAATTGCCCTCCATTCTGTTTATTTTGTANATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttatttgtccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatactgtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcggagaacatcgcttc                                          <  2:229769‑M1/251‑209 (MQ=255)
                                                                                                                                                                                                                 tAAATTGCCCTCCATTATGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttcccgtgcggnggcgtaatcttcatcgtagaaccccgcgttc                                         >  2:239871‑M1/1‑42 (MQ=255)
                                                                                                                                                                                                                     ttGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccctgttccagtgcggtgacgtaatcttcatcgtagaacaacccttcgtctc                                     >  2:114839‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                                                   gTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcacctgcgtctttc                       <  1:5891‑M1/251‑228 (MQ=255)
                                                                                                                                                                                                                                     ttAATTTGGAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcacctgcgtctttcg                      <  1:345976‑M1/250‑229 (MQ=255)
                                                                                                                                                                                                                                                         tCtaaaaaaaccccgacagttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcacctgcgtctttcgcggcaacctgatccaggaag  <  1:477832‑M1/250‑249 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                        
ATCACAACCTCGCACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAAGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTTTGTTTAATTTGTAGATGATACGTTCAGATAATGTCTAATATTTGGTCTAAAGAAGAAACTCTGTGGAGTTTCGCGCTCTACGGCACAGCCGTTGGTGCAGGCACGCTCTTCCTTCCTATTCAGTTAGGTTCGGCAGGGGCTGTGGTCCTGTTTATTACTGCTCTGGTCGCCTGGCCTTTAACATATTGGCCACATAAAGCCTTGTGCCAGTTCATCCTCTCATCAAAAACATCAGCAGGTGAAGGGATAACGGGCGCGGTAACACACTACTAT  >  NC_000913/2985591‑2986089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: