| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,196,474 | Δ29,182 bp | [yehF]–yohC | 21 genes [yehF], yehI, yehK, yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2196474 | 2225655 | 29182 | 35 [0] | [0] 35 | [yehF]–yohC | [yehF],yehI,yehK,yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2196473 | 0 (0.000) | 35 (0.570) | 32/492 | 0.5 | 100% | intergenic (+140/‑1) | metG/yehF | methionine‑‑tRNA ligase/PF05406 family protein YehF |
| ? | NC_000913 | 2225656 = | 0 (0.000) | intergenic (‑25/‑145) | yohC/yohD | putative inner membrane protein/DedA family protein YohD | |||||
AAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTTATCTATCAGGACGAAAAATCACATAAATTCAGGGCAGTTGAGCAACAGGGAAACGAGTTGCATATCAGTTGGGGAAAAGTTGGCACCAAAGGGCAAAGCCAGATAAAAAGTTTTTCAGATGCTGCGGCAGCGGCAAAAGCGGAGCTTAAGCTGATTGCGGAGAAGGTGAAGAAGGGGTATGTGGAGCAAGCGAAGGATAATTCTTTGCAACCTTCCCAAACGGTAACGGGCTCTCTCA > NC_000913/2196242‑2196723 | aaggtatgggtatggctgccggtCCTGGCTGTAAAGATATTTTCCTGCTAAGCCCGGAGGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGTCGCTGCCTCGACCGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCGTGCGATTGTGTCGCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCATCTGGATAAAATTACAGGGAGGCAGAgaacctgacagttcaaata < 2:400192‑M1/240‑20 (MQ=255) ggTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtc < 1:149184‑M1/250‑26 (MQ=255) cGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattat < 1:248716‑M1/251‑39 (MQ=255) ggCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgt < 1:488419‑M1/251‑46 (MQ=255) aaaGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgccc > 1:339158‑M1/1‑200 (MQ=255) cGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatg < 2:36764‑M1/251‑74 (MQ=255) cTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATAGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaaggataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtccttttt > 1:400345‑M1/1‑166 (MQ=255) tcatcaGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaat > 1:308342‑M1/1‑156 (MQ=255) aGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataactcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattc < 1:336343‑M1/251‑101 (MQ=255) aGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGACTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGCTAAAATTACAGGGATGCAGAgaacctgacagctcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattc > 2:111349‑M1/1‑151 (MQ=255) ggttaaataatCCCCCTTCAAGGCGCTGCATCGACATCGCCTTTTCTGTATAAATTCCTAAAGTTGTTTTCTTTCGATTTTGTCTCTCGCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattca < 2:207160‑M1/247‑102 (MQ=255) ggTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattca < 1:169561‑M1/251‑102 (MQ=255) aaaTAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagg < 1:441976‑M1/251‑106 (MQ=255) ccccTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgc > 2:252987‑M1/1‑138 (MQ=255) gcCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgagtgattcacagggtgtatgcttactggcaaccaaagggagacagac > 1:346308‑M1/1‑112 (MQ=255) tCTTTATCAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagccagactggcct > 2:151427‑M1/1‑106 (MQ=255) cTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcct > 1:294397‑M1/1‑105 (MQ=255) ataAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatgga < 2:339158‑M1/251‑151 (MQ=255) aaaTTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatc > 1:320287‑M1/1‑99 (MQ=255) aaTTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatct > 2:114153‑M1/1‑98 (MQ=255) ccTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCCACAGGATAAAATTACAGGGATGCAGAgaacctgacagttcacgtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaat > 1:199166‑M1/1‑94 (MQ=255) ccTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaat < 1:2500‑M1/251‑158 (MQ=255) aaaGTTGTTTTCTTGCGATTTTGTCTCACTCTAACCCGCATAAATACTGGAAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaatac > 1:371325‑M1/1‑91 (MQ=255) gATTTTGTCTCGCTCTAACCCGCATAAATACTGGTAGCATCTGCATGCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattgtcactgtctgatgaacgtactttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctctggatctcaatacacttatctcacaatatg < 2:339949‑M1/251‑177 (MQ=255) tttGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaatacacttatctcacaatatggtt > 1:95804‑M1/1‑72 (MQ=255) ttGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaatacacttatctcacaatatggtt > 1:62401‑M1/1‑71 (MQ=255) gTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATACCAGGGATGCAGAgaacctgacaggtcaagtataagtcagcttgtgattattttttgttcgcacatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattaacaggctgtaggcttactggcaaccaaaggacgacagactggcctaaggatctcaatacactcatctcacaatatggata > 2:487170‑M1/1‑69 (MQ=255) ctctctctAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaatacacttatctcacaatatggttatgcc > 1:371271‑M1/1‑67 (MQ=255) ctatctaacCCGCATAAATACTGGTAGCANCTGCATGCAACCGGATAAAATTACAGGGATTCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgagcgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaatacacgtatctcacaatatggttatgcc < 2:239108‑M1/246‑185 (MQ=255) cccGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaatacacttatctcacaatatggttatgccgcgctggtg > 1:220805‑M1/1‑57 (MQ=255) cccGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttact > 2:12537‑M1/1‑57 (MQ=255) cccGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttact < 1:12537‑M1/175‑119 (MQ=255) aCTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaatacacttatctcacaatatggttatgccgcgctggtgatcggtagcctg < 1:312831‑M1/251‑206 (MQ=255) aGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAgaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttcactgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcctatggatctcaatacacttatctcacaatatggttatgccgcgctggtgatcggtagcctggcgga > 2:337842‑M1/1‑40 (MQ=255) agaacctgacagttcaagtataagtcagcttgtgattattttttgttcgcccatgtaattttccctgtctgatgaacgtcctttttcagcgtgaatgattcacagggtgtatgcttactggcaaccaaagggagacagactggcatatggatctcaatacacttatctcacaatctggatatgcagcgctggtgatcggtagcctggcgaaaggtgaaaccgtgactttgctgggaggcgttgcggcgcat > 2:424454‑M1/1‑1 (MQ=255) | AAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTTATCTATCAGGACGAAAAATCACATAAATTCAGGGCAGTTGAGCAACAGGGAAACGAGTTGCATATCAGTTGGGGAAAAGTTGGCACCAAAGGGCAAAGCCAGATAAAAAGTTTTTCAGATGCTGCGGCAGCGGCAAAAGCGGAGCTTAAGCTGATTGCGGAGAAGGTGAAGAAGGGGTATGTGGAGCAAGCGAAGGATAATTCTTTGCAACCTTCCCAAACGGTAACGGGCTCTCTCA > NC_000913/2196242‑2196723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |