Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,466,540 9636 bp→ACCC intS[ypdJ] 15 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2466540 2476175 9636 50 [0] [0] 49 intS–[ypdJ] intS,yfdG,yfdH,yfdI,yodE,yfdK,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 24665390 (0.000)49 (0.810)
+ACCC
45/484 0.1 100% intergenic (+156/‑6) argW/intS tRNA‑Arg/prophage CPS‑53 integrase
?NC_000913 2476176 = 0 (0.000)coding (304/306 nt)
coding (83/141 nt)
yfdT
ypdJ
protein YfdT
putative uncharacterized protein YpdJ

ATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCATGCTCACCGTTAAGCAGATTGAAGCAGCAAAGCCGAAAGAAAAACCATACCGCCTTCTCGATGGTAATGGCCTGTACCTTTATGTCCCTGTGTCAGGGAAAAAGGTATGGCAGCTTCGCTACAAGATTGACGGTAAGGAGAAAATCCTGACCGTCGGAAAATATCCGCTTATGACTTTGCAGGAGGCAAGGGATAAAGCATGGACTGCGAGGAAAGACATCTCGGTTGGCATCGATCCT  >  NC_000913/2466293‑2466784
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
ataCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccc                                                                                                                                                                                                                                                   >  2:313847‑M1/1‑247 (MQ=255)
    tCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACAACATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctcat                                                                                                                                                                                                                                               >  1:281207‑M1/1‑243 (MQ=255)
      aTGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatag                                                                                                                                                                                                                                             <  1:238924‑M1/251‑11 (MQ=255)
           gaatggtcctcTTAGTGAAATGGATATAACGAGCCCCTCCTAAGGGCTAATGGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATACCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagcca                                                                                                                                                                                                                                        <  2:137681‑M1/246‑16 (MQ=255)
               tGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACTCCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCTGATTTTaccctaatagagccatac                                                                                                                                                                                                                                     <  1:54605‑M1/250‑19 (MQ=255)
                gTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatac                                                                                                                                                                                                                                     >  1:199050‑M1/1‑231 (MQ=255)
                        aGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCTTGATGGGTAAAAAGTGGCTAAAATAATTTTACCCACCGGCTTTTaccctaatagagccatacagcctaaaac                                                                                                                                                                                                                           >  2:2798‑M1/1‑223 (MQ=255)
                              aTGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatg                                                                                                                                                                                                                     <  2:482661‑M1/251‑35 (MQ=255)
                                       aCGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGCGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcatgtc                                                                                                                                                                                                            >  1:421689‑M1/1‑208 (MQ=255)
                                               ctcctAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttctt                                                                                                                                                                                                    >  1:465091‑M1/1‑200 (MQ=255)
                                                     aGGGCTAATTGCAGGTTCTATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACAAGTCCGCAAAATCCCCTGAATCTCAAGCCTTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGCCAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacatcaccacactcgatggggcctgtcagtttcttaacat                                                                                                                                                                                               >  2:401416‑M1/1‑194 (MQ=255)
                                                            aTTGCAGGTTCGCTTCCTGCAGGTGACAACATTTATTAGTTCGCTCCCATCCGTACCAGGCCGCAAAATCCCCTGAATATCACGCATTCCTTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACGCCAGGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCTGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgat                                                                                                                                                                                       <  2:264404‑M1/251‑65 (MQ=255)
                                                             ttGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGATCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGAAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctctcactcgatgaggcctgtcagtttcttaaaatatcctgatc                                                                                                                                                                                      >  1:253997‑M1/1‑186 (MQ=255)
                                                                   gTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccat                                                                                                                                                                                >  1:444910‑M1/1‑180 (MQ=255)
                                                                         gtcCTGCAGGGGACACCATTTATCAGTGCGCTCCCATCCGAACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGGTTTACAGTTCGTCATGGCACGCTTCAGATCGTTGACAGCCGCCCGCGATGACGGGGAAAGGGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacacccgatgaggcctgtcagtttcttaaaatatactgctctcccatcgccgt                                                                                                                                                                          >  2:305005‑M1/2‑174 (MQ=255)
                                                                          tCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgt                                                                                                                                                                          <  1:42697‑M1/250‑78 (MQ=255)
                                                                                 ggggACACCAGTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcactcgcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagc                                                                                                                                                                  <  2:366063‑M1/251‑86 (MQ=255)
                                                                                     acacCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtat                                                                                                                                                              <  2:425419‑M1/251‑90 (MQ=255)
                                                                                                      gCTCCCATCCGTCCCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTAATGGTGCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatagcctgatctaccatcgccgtcatagagcgtattttgattacctgatttg                                                                                                                                             <  2:5573‑M1/251‑107 (MQ=255)
                                                                                                        ccccaTCCGTACCAGTCCGCAATATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTAGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgca                                                                                                                                           <  2:328113‑M1/250‑109 (MQ=255)
                                                                                                         cccATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcag                                                                                                                                          <  1:30262‑M1/251‑110 (MQ=255)
                                                                                                            aTCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacacgcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggtt                                                                                                                                       <  2:442357‑M1/251‑113 (MQ=255)
                                                                                                                      gTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattcccta                                                                                                                             <  1:325418‑M1/251‑123 (MQ=255)
                                                                                                                           cAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgagttgcaggttcgattccctattc                                                                                                                          <  1:187834‑M1/249‑126 (MQ=255)
                                                                                                                            aaaaTCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcgg                                                                                                                        >  1:66072‑M1/1‑123 (MQ=255)
                                                                                                                                          atccagcattcctgatatttacagttcgtcatgGTCCCCGTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGAGGGTAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgc                                                                                                         <  2:251041‑M1/235‑143 (MQ=255)
                                                                                                                                                  ttCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacga                                                                                                  >  1:417727‑M1/1‑101 (MQ=255)
                                                                                                                                                     cGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGGAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagactcaaactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgccacacgaact                                                                                               >  2:252920‑M1/1‑98 (MQ=255)
                                                                                                                                                              aCAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGCTAAAATAATTTTACCCACCGGCTTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttacaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgat                                                                                     >  2:438336‑M1/1‑89 (MQ=255)
                                                                                                                                                              aCAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgat                                                                                     >  1:201384‑M1/1‑89 (MQ=255)
                                                                                                                                                                agtccgtcaTGGTTCGCTTCAGATCGTTGACNGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattc                                                                                   <  2:236749‑M1/247‑165 (MQ=255)
                                                                                                                                                                aGTTCGTCATGGGTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACAGGCTTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctacactcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagccctcctgcaacacgaactaaagcccgattc                                                                                   >  2:292792‑M1/1‑87 (MQ=255)
                                                                                                                                                                    cGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcact                                                                                <  1:140481‑M1/250‑168 (MQ=255)
                                                                                                                                                                     gacagggttcgcTTCAGATCGTTGACAGCCGCACGCCAGGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactgg                                                                              <  2:42573‑M1/246‑170 (MQ=255)
                                                                                                                                                                     gTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactgg                                                                              >  1:79869‑M1/1‑82 (MQ=255)
                                                                                                                                                                          ggTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgat                                                                         <  1:313847‑M1/251‑175 (MQ=255)
                                                                                                                                                                                            gACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcttgcaacacgaactacagcctgattcactggttgatttgaaattcatcatggct                                                       >  1:265816‑M1/1‑59 (MQ=255)
                                                                                                                                                                                                          aTGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgcttcactggttgctttgaaattcatcatggctgatactggctttgg                                         >  1:434206‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                                 gTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgatttgaaattcatcatggctgatactggctttggtaaaacc                                  >  1:301145‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                                   aaaaaGTGGATAAAATAATTTTACCCACCGGCTTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactgggtgatttgaaattcntcatggctgatactggctttggtaaaacctt                                >  2:248173‑M1/1‑36 (MQ=255)
                                                                                                                                                                                                                           gATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgatttgaaattcatcatggctgatactggctttggtaaaaccttcatctatg                        >  1:100160‑M1/1‑28 (MQ=255)
                                                                                                                                                                                                                           gATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgat                                                                         >  2:164912‑M1/1‑28 (MQ=255)
                                                                                                                                                                                                                           gATAAAATAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgat                                                                         <  1:164912‑M1/202‑175 (MQ=255)
                                                                                                                                                                                                                            aaaaaataATTTTACCCACCGGATTTTaccctaatagagccatacagcctcaccctcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattgcctgatttgcaggttcgattccctagtcggagatagctctcatgcaacacgaactacagcctgattctctggttgattttaaattcatcatggctgatactggctttggtaaaaccttcatctatga                       <  1:168322‑M1/249‑225 (MQ=255)
                                                                                                                                                                                                                              aaaaTAATTTTACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgatttgaaattcatcatggctgatactggctttggtaaaaccttcatctatgacc                     <  2:265816‑M1/251‑227 (MQ=255)
                                                                                                                                                                                                                                       ttACCCACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgatttgaaattcatcatggctgatactggctttggtaaaaccttcatctatgaccggattaagt            >  2:197726‑M1/1‑16 (MQ=255)
                                                                                                                                                                                                                                         aCCCCCCGGATTTTacccgaatagagccatacagcctcacactcgatgatgcctttcagtttcttaatatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgatttgaaattcatcatggctgatactggctttggtaaaaccttcatctatgtccggattaagtc           <  1:303195‑M1/250‑237 (MQ=255)
                                                                                                                                                                                                                                          cccACCGGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgatttgaaattcatcatggctgatactggctttggtaaaaccttcatctatgaccggattaagtc           >  2:184340‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                             cccgGATTTTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgatttgaaattcatcatggctgatactggctttggtaaaaccttcatctatgaccggattaagtcaggcg      <  2:11279‑M1/250‑242 (MQ=255)
                                                                                                                                                                                                                                                 gATTCTaccctaatagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaatatcctgatctaccatcgccgtcatagagcgtatttttattacctgatttgcaggttcgattccctattcggagatagcactcatgcaacacgaactacagcctgattcactggttgatttgcaattcatcatggctgatactggctttggtaaaaccttcatttcggaccggcttacgtcaggcgccct  >  2:138046‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
ATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCATGCTCACCGTTAAGCAGATTGAAGCAGCAAAGCCGAAAGAAAAACCATACCGCCTTCTCGATGGTAATGGCCTGTACCTTTATGTCCCTGTGTCAGGGAAAAAGGTATGGCAGCTTCGCTACAAGATTGACGGTAAGGAGAAAATCCTGACCGTCGGAAAATATCCGCTTATGACTTTGCAGGAGGCAAGGGATAAAGCATGGACTGCGAGGAAAGACATCTCGGTTGGCATCGATCCT  >  NC_000913/2466293‑2466784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.