Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,066,152 Δ12,778 bp insH6[yoeF] insH6, yoeA, insD3, insC3, yoeA, isrC, flu, yeeR, yeeS, yeeT, cbeA, cbtA, yeeW, [yoeF]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2066152 2078929 12778 56 [0] [0] 56 insH6–[yoeF] insH6,yoeA,insD3,insC3,yoeA,isrC,flu,yeeR,yeeS,yeeT,cbeA,cbtA,yeeW,[yoeF]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20661510 (0.000)56 (0.920) 52/490 0.1 100% intergenic (‑387/+154) cobU/insH6 cobinamide‑P guanylyltransferase/cobinamide kinase/IS5 family transposase and trans‑activator
?NC_000913 2078930 = 0 (0.000)coding (356/357 nt) yoeF putative uncharacterized protein YoeF

GATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATGCACTAGGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATC  >  NC_000913/2065909‑2066388
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                             
gATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcga                                                                                                                                                                                                                                       <  1:109168‑M1/251‑9 (MQ=255)
gATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAAAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcg                                                                                                                                                                                                                                        >  1:253580‑M1/1‑243 (MQ=255)
      aTTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggtt                                                                                                                                                                                                                                 <  1:474330‑M1/251‑15 (MQ=255)
            gAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcgg                                                                                                                                                                                                                            >  1:220075‑M1/1‑231 (MQ=255)
                    aGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCTGTTTCTGGGGAGTGACACATTACATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATGGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTAGaatttcgagtggttcgcggatgaggatt                                                                                                                                                                                                                   <  2:12732‑M1/251‑29 (MQ=255)
                      aCTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgat                                                                                                                                                                                                                 <  1:101486‑M1/251‑31 (MQ=255)
                        tttCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatg                                                                                                                                                                                                                >  1:6562‑M1/1‑219 (MQ=255)
                                gtTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgat                                                                                                                                                                                                        <  1:400706‑M1/250‑40 (MQ=255)
                                 ttAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGAGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGCTCTACGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatac                                                                                                                                                                                                      >  1:440190‑M1/1‑210 (MQ=255)
                                   aaCGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacac                                                                                                                                                                                                    >  1:16060‑M1/1‑208 (MQ=255)
                                     cGTCCGACAAAATGCGTCATTGACAGCGGTTTATGTGGCTTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGACCTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacac                                                                                                                                                                                                    >  2:110707‑M1/1‑206 (MQ=255)
                                      gTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacac                                                                                                                                                                                                    >  1:40801‑M1/1‑205 (MQ=255)
                                               aaTGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCCGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctaggatgaggatgatgacggtgatacacagctaagaatc                                                                                                                                                                                         >  2:164652‑M1/1‑196 (MQ=255)
                                                  gCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatg                                                                                                                                                                                     <  2:63375‑M1/251‑59 (MQ=255)
                                                                    tCTGTGGATTGACACATTTAATTCAGAGAATGAATTAATGCGACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccg                                                                                                                                                                    <  2:340216‑M1/250‑76 (MQ=255)
                                                                       gttaagggccacatttcattcaGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggca                                                                                                                                                                <  1:367805‑M1/242‑80 (MQ=255)
                                                                             tGACACATGTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAAGAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccct                                                                                                                                                           <  2:476999‑M1/250‑85 (MQ=255)
                                                                                 acaTTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattg                                                                                                                                                      >  1:309330‑M1/1‑162 (MQ=255)
                                                                                        attcaGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaa                                                                                                                                                >  1:486218‑M1/1‑155 (MQ=255)
                                                                                                  tGAAGTAATGCTACTGCCGGAACAACCAGCACACGGGCATTGAGTTCTGAAATCCAGGCTATTGATTCAACGCCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAGTGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacagagataagaatcaatgagcaatgggggttgccgggcaaccctcattgaataaaacggaaattac                                                                                                                                     >  2:338202‑M1/1‑145 (MQ=255)
                                                                                                         atacgactgccGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGATATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATTCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgctt                                                                                                                              <  2:16449‑M1/246‑114 (MQ=255)
                                                                                                         aTGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgctt                                                                                                                              <  2:472715‑M1/251‑114 (MQ=255)
                                                                                                          tGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttc                                                                                                                             >  2:57012‑M1/1‑137 (MQ=255)
                                                                                                           gcttctggcggaacaaaCAGCAAACGGGCATTGTGTGCTGAAATCCAGGCTAGTGATTCACCGTCAGCGACAGATCTGCGCTGTAAAAGAAATTGTAAAACAACGTAATAGAATTATACGGAATGGTGGCGACTATaatttcgattgggtctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaacccgcattgaatacatcgggaattacttcgcatct                                                                                                                            <  2:348724‑M1/243‑116 (MQ=255)
                                                                                                               cTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgt                                                                                                                        >  2:47218‑M1/1‑132 (MQ=255)
                                                                                                                   cGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgttttt                                                                                                                    >  1:389001‑M1/1‑128 (MQ=255)
                                                                                                                     gAACAACCAGCAAACGGGCATTGTGTTCTGAAATCAAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAAAGGTGGCGACTATaatttcgattggttctcggctgaggatgatgacggcgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaccgggaattacttagcttcgtcgtttttc                                                                                                                   >  1:479306‑M1/1‑126 (MQ=255)
                                                                                                                        caacCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcattt                                                                                                               <  1:225613‑M1/251‑129 (MQ=255)
                                                                                                                          acCAGCAAACGGGCATTGTGTTCTGAAATCCNGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcg                                                                                                             <  2:234084‑M1/251‑131 (MQ=255)
                                                                                                                               cAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccat                                                                                                        <  2:40801‑M1/251‑136 (MQ=255)
                                                                                                                                aaaCGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaagcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccata                                                                                                       <  1:445515‑M1/251‑137 (MQ=255)
                                                                                                                                 aaCGGGCATTGTGTTCTGAAATCCAGGCTATTGAGTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaatgacttcgcttcgccggttttcatttcgcccatag                                                                                                      <  2:387900‑M1/251‑138 (MQ=255)
                                                                                                                                    gggCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGACTGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccatcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctt                                                                                                   >  1:23089‑M1/1‑111 (MQ=255)
                                                                                                                                           gtgtTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctt                                                                                            >  2:184415‑M1/1‑104 (MQ=255)
                                                                                                                                           gtgtTCTGAAATCCAGGCGATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctt                                                                                            <  1:487430‑M1/251‑148 (MQ=255)
                                                                                                                                              ttCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagcttttt                                                                                         >  1:92539‑M1/1‑101 (MQ=255)
                                                                                                                                                  gAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttgg                                                                                       >  1:198462‑M1/1‑97 (MQ=255)
                                                                                                                                                    aaTCCAGGCGATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTAACCGGAATGGTGGCGACTATaagttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagat                                                                                   <  2:272193‑M1/251‑157 (MQ=255)
                                                                                                                                                         aGGCTATTGATTGAACGGCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACATCGTAATAGAAGTATCCGGAATGGTGGCGACTATaatttcgagtggttctcggatgaggatgatgacggtgatacgcagataagaatcaattagcaatgagggttgccgggccaccctcattgaataaaacgggaattacttcgcttcgccatttttcatttctcccctagctttcagctttttggagatagcgc                                                                              <  2:276552‑M1/251‑162 (MQ=255)
                                                                                                                                                             tATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcg                                                                          >  2:136145‑M1/1‑86 (MQ=255)
                                                                                                                                                                    tCAACGTCAGCGACAGATCTGGGCTGTAAAAGAACGTGTAAAACAACGTAATAGAATTATCCGGAAGGGTGGCGACTATaatgtcgattggttctaggatgaggatgatgacggtgatacagagataagaaccaaggagcaatgagggttgccgggcaaccctcattgaataaaacgggaagtacttcgcttcgccgtttttcattgcgcccatagctgtcagctttttggagatatcgcggcgttcttt                                                                    <  2:28059‑M1/250‑172 (MQ=255)
                                                                                                                                                                    tCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttcttt                                                                    <  2:272194‑M1/250‑172 (MQ=255)
                                                                                                                                                                         gTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTCTaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggag                                                                >  1:166820‑M1/1‑74 (MQ=255)
                                                                                                                                                                               gACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgcaacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaaagggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggaaatatcgcggcgatctttggagagctcgg                                                         >  2:393457‑M1/1‑68 (MQ=255)
                                                                                                                                                                                  aGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagntatcgcggcgttctttggagagctcggcatt                                                     >  2:225491‑M1/1‑65 (MQ=255)
                                                                                                                                                                                                aaaGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaat                                       <  2:49184‑M1/251‑201 (MQ=255)
                                                                                                                                                                                                    aaCTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtc                                   <  1:219303‑M1/251‑205 (MQ=255)
                                                                                                                                                                                                     aCTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcagcgttctttggagagctcggcatttttgatgatgtaatcgtc                                   >  2:375318‑M1/1‑46 (MQ=255)
                                                                                                                                                                                                         gTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgc                              >  1:261073‑M1/1‑42 (MQ=255)
                                                                                                                                                                                                             aacaacGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatc                          >  1:324395‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                                   gTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgat                                               >  2:279113‑M1/1‑32 (MQ=255)
                                                                                                                                                                                                                   gTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgat                                               <  1:279113‑M1/224‑193 (MQ=255)
                                                                                                                                                                                                                      aTAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggctgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtc                 >  2:286558‑M1/1‑29 (MQ=255)
                                                                                                                                                                                                                         gAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacc              <  1:184620‑M1/251‑226 (MQ=255)
                                                                                                                                                                                                                              aTCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctttc          <  1:184415‑M1/250‑230 (MQ=255)
                                                                                                                                                                                                                                     aTGGTGGCGACTATaatttcgattggttatcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctttcatgctggc  >  1:321389‑M1/1‑14 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                             
GATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATGCACTAGGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATC  >  NC_000913/2065909‑2066388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.