Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,640,057 Δ7,591 bp [rrrQ][dicC] 18 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1640057 1647647 7591 42 [0] [0] 42 [rrrQ]–[dicC] [rrrQ],[ydfR],essQ,ynfU,cspB,cspF,ynfS,ydfT,ydfU,rem,hokD,relE,relB,ydfV,flxA,ydfW,ydfX,[dicC]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16400560 (0.000)42 (0.680) 38/492 0.3 100% coding (2/534 nt)
coding (310/312 nt)
rrrQ
ydfR
putative lysozyme
protein YdfR
?NC_000913 1647648 = 0 (0.000)coding (203/231 nt) dicC putative DNA‑binding transcriptional regulator DicC

GTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATTTTTGTGTTCATAGATATTTATGATGAGGACGCTCGTGCTTATTGGCAGGATTTTCAATCTTAAAGGAGTACTGATGCTGCAGATAAGACTCAACTTTTTCTGACAATTTTTCTGCTACTTCCAGGAAGACTTGCCGGACGCTCCTTCTGGCTGCTGCCTCATAAAACTCCAGCGCAGCTCCTTCAACACGGTCCATGGCGACATCCAGGTCAAAAATTTCACCGTCAAAGCGTTCTTTGTCCTGTAA  >  NC_000913/1639824‑1640293
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                             
gTTGACCTGGTCGCATTTTTCCTGCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAAGCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtctt                                                                                                                                                                                                                              <  1:198256‑M1/251‑18 (MQ=255)
   gACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacg                                                                                                                                                                                                                           >  1:208176‑M1/1‑231 (MQ=255)
                       tCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCCCCACTGGGGCACCCCGACAGATGTTCCATATGCCAGAACCATCGCGGTATGCCATGGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCGcccgcccgcttcgtcttacgatattcatcataaactttg                                                                                                                                                                                                        <  2:298119‑M1/250‑40 (MQ=255)
                          gcaGTTGCATATTGGGAAAAACGTTTTTTCCATCCTCCGCTGTGGCGCCCCGACAGATGTTCCATATGCCAGATCCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTGTCTGAGGAGCAGATTCGCCATCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCTcccgcccgcttcgtcttacgatattcatcataaactttgggat                                                                                                                                                                                                    <  2:313763‑M1/250‑44 (MQ=255)
                           cAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatc                                                                                                                                                                                                   >  2:278387‑M1/1‑207 (MQ=255)
                             gTTTCATATTGGGACAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCAATTGTGTGGGTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGCCAGGCCGTATCTGATCTTTTGTGTTAAcccgcccgcttcgtcttacgatattcatcataaactttgggatcat                                                                                                                                                                                                 >  2:306375‑M1/1‑205 (MQ=255)
                                 cATATTGGGAAAAACGGTTTTTCCATCCACAACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggcgcatactg                                                                                                                                                                                             >  2:57460‑M1/1‑201 (MQ=255)
                                       gggAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctc                                                                                                                                                                                       >  1:167590‑M1/1‑195 (MQ=255)
                                                                   gtgGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCGTTTTCGGCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaacttttggatcatactgaagctccccgccagatgcctcctgtagacgca                                                                                                                                                             <  1:378117‑M1/249‑83 (MQ=255)
                                                                              aCAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTTTTTGGTTACCTTCTTTTGCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCCGCACCAATCAGCGCCAGAACGGCAGCCGTCAGGCGTTATTTGAGTTTTTGTGTTCCcccgtccgcttcgtcttacgatattcatcataaactttgggctcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttc                                                                                                                                                <  2:367874‑M1/251‑96 (MQ=255)
                                                                              aCAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttc                                                                                                                                                <  1:105089‑M1/251‑96 (MQ=255)
                                                                                    ggTCCATATGCCAGAACCATCGCGGTATGCCATTGTTTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGGATCTGAGGAGCAGATGCGCCAGCTCCAATCAGCGCCAGAACGGCAGCCAACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataatctttgggatcatactgaatctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaac                                                                                                                                          <  1:469508‑M1/251‑102 (MQ=255)
                                                                                                aGAACCATCGCGGGATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGACGTATCTGATCTTTTGGGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagatccccgccagatgcctcctgaagacgcatcgcgcgcccttcgggaactaactccccttt                                                                                                                              >  2:209446‑M1/1‑138 (MQ=255)
                                                                                                     catagcggtatGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGAAGCGCGAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGACGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgcaagatgcctcctgtagacgcatcgcgcgaccttcgggagctaaatcccctttccagc                                                                                                                         >  1:450608‑M1/5‑133 (MQ=255)
                                                                                                          cgGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctata                                                                                                                     >  1:276929‑M1/1‑128 (MQ=255)
                                                                                                              aTGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTAGCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagc                                                                                                                 <  1:30829‑M1/250‑127 (MQ=255)
                                                                                                                gcccttgtgtGGTTCCCTTCTATTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCTCCAGCCCCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttactatattcatcataaactttgggatcatactgaagctccccgccagatgccgcctgtatacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaa                                                                                                              <  1:138267‑M1/247‑130 (MQ=255)
                                                                                                                 ccATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaag                                                                                                             <  1:440894‑M1/251‑131 (MQ=255)
                                                                                                                 ccATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcga                                                                                                               >  2:459919‑M1/1‑121 (MQ=255)
                                                                                                                           gTTACCTTCTTTTTCGTCCAGAAACGGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaat                                                                                                   <  1:439759‑M1/251‑141 (MQ=255)
                                                                                                                             tACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaata                                                                                                  <  1:459919‑M1/250‑142 (MQ=255)
                                                                                                                                      tttCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgctt                                                                                        >  2:150047‑M1/1‑100 (MQ=255)
                                                                                                                                        ccttccataatctgaccaagtatctgaggacccGCTGCGCCAGCACCAATCATCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGGGTTCAcccgcccgcttcgtcttacgatattcatcataaactttggtatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgt                                                                                      <  2:41802‑M1/235‑154 (MQ=255)
                                                                                                                                            ccAGAAACTGGTCAAGTACCTGAGGAGCAGATGCGCCAGCACCAACCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaa                                                                                  <  1:209446‑M1/251‑158 (MQ=255)
                                                                                                                                                     ggTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgttt                                                                         >  2:193131‑M1/1‑85 (MQ=255)
                                                                                                                                                        cAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgttttt                                                                       <  1:150047‑M1/250‑169 (MQ=255)
                                                                                                                                                         aaGTATCTGAGGGGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttga                                                                     <  1:148586‑M1/251‑171 (MQ=255)
                                                                                                                                                         aaGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgactacctgctgcttgtgcaagttttgtttttg                                                                      >  2:364783‑M1/1‑81 (MQ=255)
                                                                                                                                                           gTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcatgttttgtttttgaac                                                                   <  1:121180‑M1/251‑173 (MQ=255)
                                                                                                                                                                tgaagagcagaTGCGCCAACACCAATCAGCTCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgacactccacgccagatgcctcctgtagacgcatcgcgcgaccttcgggtactaaatcccctttccagctctcaagcgaagccaaacgaaaacctgctgcttgtgcaagttttgtttttgaacagaa                                                               >  2:370007‑M1/5‑74 (MQ=255)
                                                                                                                                                                  gggggcagaGGCCCCAGCCCCCATCAGCGCACGAACGGCAGCGGCCAGGCCGTATCTGATCTTTTTTGTTCCcccgcccgcttcgtcttacgatattcaacataaactgtgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaata                                                            <  2:194460‑M1/247‑180 (MQ=255)
                                                                                                                                                                        aGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTCTCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagcaccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgccgctagagcacgctttgtttttgaaccgaactacaaa                                                        >  2:458985‑M1/1‑66 (MQ=255)
                                                                                                                                                                            gcgcCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagc                                                   <  1:306375‑M1/250‑189 (MQ=255)
                                                                                                                                                                                    aCCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagtttt                                          >  1:430194‑M1/1‑54 (MQ=255)
                                                                                                                                                                                         ccaGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagca                                     <  2:167590‑M1/250‑203 (MQ=255)
                                                                                                                                                                                           aGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgagatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtccgttttaagcatt                                   >  1:129150‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                             gACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgtt                 <  1:57460‑M1/251‑223 (MQ=255)
                                                                                                                                                                                                                 gggccttagctgttcttgtgtgttcacccgcccgcttcgtcttacgatattcatcataacctttgggatcatactgaagctccccgccagatgcctcctggagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagt              <  2:390330‑M1/233‑226 (MQ=255)
                                                                                                                                                                                                                   ccGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtcat           >  1:205204‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                   ccGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtcat           >  2:293857‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                                 tttttgttcccccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtcataactaacaa  <  2:271851‑M1/243‑238 (MQ=255)
                                                                                                                                                                                                                                 tttGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtcataactaaca   <  1:293857‑M1/246‑237 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                             
GTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATTTTTGTGTTCATAGATATTTATGATGAGGACGCTCGTGCTTATTGGCAGGATTTTCAATCTTAAAGGAGTACTGATGCTGCAGATAAGACTCAACTTTTTCTGACAATTTTTCTGCTACTTCCAGGAAGACTTGCCGGACGCTCCTTCTGGCTGCTGCCTCATAAAACTCCAGCGCAGCTCCTTCAACACGGTCCATGGCGACATCCAGGTCAAAAATTTCACCGTCAAAGCGTTCTTTGTCCTGTAA  >  NC_000913/1639824‑1640293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.