| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,048,596 | G→A | G32G (GGC→GGT) | gfcC ← | capsule biosynthesis GfcC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,048,596 | 0 | G | A | 95.6% | 213.1 / NA | 69 | G32G (GGC→GGT) | gfcC | capsule biosynthesis GfcC family protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (31/34); minor base C (1/2); total (32/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGAGTAACTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCGCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGTTTTTCTGGCCGCGTGGAAGTCACCTCTTCCTGCCA > NC_000913/1048367‑1048840 | ggagTAACGGCGGGCGCACGGATTTAATCGTGGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACAGTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTctcc < 2:472953/250‑4 (MQ=255) gttatctgctgGCGCGCGGATGTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTTCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTTT‑TGTTCACCAGGCAGATAAATAGTCACCGt < 2:736982/246‑1 (MQ=255) aaCTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTc < 1:375805/250‑1 (MQ=255) aaCTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTAGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTcc > 2:184101/1‑251 (MQ=255) ctgGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTgcg > 1:265005/1‑251 (MQ=255) tgGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTgcgc > 1:89698/1‑251 (MQ=255) cACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAgg > 1:533234/1‑251 (MQ=255) aCGGCTTTAATCGATGCCGCCACATCGTCATCAGCTGCTTCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCACGGCACCAGGCCACCAGAGGCGATAGCGCAGGTGCGGTGGTGTCACAACCTGGACAACATTTTCCACGGGGCCAACGTGAAA‑TGTATGG‑CGTTCACCAGGCCCATAAATAGTCCCCGTTTCTTCCGCaccggc > 2:275293/1‑246 (MQ=255) aCGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGc < 1:543939/251‑1 (MQ=255) ggATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCAt < 1:585997/251‑1 (MQ=255) ggATTTAATCGTTGCCGCAACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAggact > 2:637048/1‑248 (MQ=255) aaTCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCCGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GCAAGTGTCTGA‑TGTTCACCAGTTAGCTAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGgtg > 2:302811/1‑251 (MQ=255) cGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTc < 1:133611/250‑1 (MQ=255) cGTTGCCGCCACATCGTCGCCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTc < 1:170560/250‑1 (MQ=255) gTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCAt > 1:513204/1‑251 (MQ=255) tGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCAtt < 1:400530/250‑1 (MQ=255) gccgccACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGGGTCATTAc > 1:187817/1‑251 (MQ=255) ccgccACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGt > 1:344754/1‑214 (MQ=255) gccACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGt > 1:441253/1‑250 (MQ=255) acaTCGTCGTCAACATCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGCGGCGATCGCGCAGTCTCGGTTGTATCACCAAATGGACAACATTATCCCCGGGGCCACCG‑GAAAGTGACGGTATGT‑CACCAGGCAGATAAATAGGCACCGTTCCGTGCGCAAAGGCATGGGGGGTCAttgcataa > 2:492173/1‑243 (MQ=255) caTCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGt < 1:67010/251‑1 (MQ=255) aTCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGACTGT‑TGTTCCCCAGGCAGATAAATAGTCACCGCTCCTTGCGCAAAGGCATGGGGTGTCATTACGTaacgt > 1:477883/1‑247 (MQ=255) cgtcgtCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACg < 1:425260/251‑1 (MQ=255) gtcgtcAGCTTCTGCTTCCCAGGCAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTACGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCCCCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCCTTACGTaaattaagc > 2:711231/1‑245 (MQ=255) cgtcAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTg > 1:522179/1‑251 (MQ=255) cAGCTTCTACGTCCCAGGAAGCAAGCTCTGCCATGTCATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCCAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTGGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGGGTCTGT‑TGTTCACCCGGCAGATAAATAGTCACCGTTCCGTGCGCAAAGGCATGGGGTGTCATTACGTAAAGGACGCTGGCa < 2:590749/251‑1 (MQ=255) gattCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGATTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGGGTCACCAACTGGACAACATGTTCCACTGGGCCAACG‑GAAAGTGGCTGT‑TGTTCACCAGGCAGATAAATAGTAACCGGTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGaaag < 2:505272/248‑2 (MQ=255) gCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGGCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAAt < 2:151528/250‑1 (MQ=255) tCCCAGGAAGCAAGCGGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACg < 2:722542/250‑1 (MQ=255) aGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGt > 1:533169/1‑251 (MQ=255) ggAAGCAAGCTGGGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTa < 2:522179/251‑1 (MQ=255) agcTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTGCGCTGGCAATGAACTACGACTGTAATTTAtt > 2:216111/1‑251 (MQ=255) ggTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGCGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGa > 2:577642/1‑250 (MQ=255) tAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGGCAGCAAGGCACCAGGCCACCAGAGGCTATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACAGTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGaaa < 2:557422/250‑1 (MQ=255) aaGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTc > 1:469727/1‑251 (MQ=255) gcgcTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTa < 1:637048/251‑1 (MQ=255) aGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCACGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGACAACG‑GAAAGTGTCTGT‑TGTTCACCCGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGACATTTCTCCGGGAAt > 1:448905/1‑251 (MQ=255) tCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAAcc < 2:533169/250‑1 (MQ=255) cgccgcAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAAcccc < 2:265005/251‑1 (MQ=255) ggTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACAt < 2:97488/251‑1 (MQ=255) cAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCGTGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTg > 1:162443/1‑251 (MQ=255) ggCCACCCGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAACAGTCACCGTTCCTTGCGCACAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCACAGAAATACGACTGTAATTTATTCATGGGTCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACCTTGACg > 2:637830/1‑250 (MQ=255) gATCGCGCAGTTGCGGTTGTGTCAACAACTGGTCAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCCTGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGCACCTGGCCAGt > 2:253173/1‑249 (MQ=255) aTCGCGCAGTTGCGGTTGTGCCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCCCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGc < 1:190519/251‑1 (MQ=255) cgcgCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTTGCCAGTAGcc < 1:494899/250‑1 (MQ=255) cgcAGTTGCGGTTGAGTCACCACCTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGACAGATAAATAGACACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTCAGTAAAGTACACTGGCAATGAAATACGACTGTCATTTATTCATGGTGCGGGTTTAAGCAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGTCTTTTACCAACCTGGCCAGTAGCCGa > 2:325812/1‑250 (MQ=255) cAGTTGCGGTTGTGGCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATc < 2:515110/251‑1 (MQ=255) aGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGGGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCg > 1:132411/1‑251 (MQ=255) gCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGAcc < 1:370843/250‑1 (MQ=255) ttGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGAGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGa > 1:443677/1‑250 (MQ=255) tCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAACGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCa > 2:738532/1‑226 (MQ=255) tCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCa < 1:738532/226‑1 (MQ=255) cACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATgtgt < 1:578237/250‑1 (MQ=255) aCTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGcc > 1:107293/1‑251 (MQ=255) ggACAACATTTTCCGCGGGGCCAACG‑GAAAGTTGCTGT‑TGTTCACCAGGCAGATAAATAGTCACCTTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCAGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTGCTACGGGAATAACCCCTGCGCCTAACATTTGCGGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCa < 1:31393/249‑1 (MQ=255) ggACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCa < 1:711231/249‑1 (MQ=255) ggACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACt < 1:439627/251‑1 (MQ=255) caacaTTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGAGTTTTGCCACTGat > 2:234638‑M1/1‑249 (MQ=255) tCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgact > 2:491294‑M1/1‑241 (MQ=255) tCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgac < 1:216111‑M1/250‑10 (MQ=255) cGGGGCCATCG‑GAAAGTGTCTGT‑TGTTCACAAGGCAGATAAATTGTCAACGTTCCTTGCGCAAAGGCATGGGGTGGCATTACGTAAAGTACTCTGTCAATGAAATACTACTTTAATTTATTCATGGTGCGTGTTTAAGAAACGTCATTTCTTCGGGAATAACCCCTGCGCCTATCATTTGCCGTCTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGGTTTGCCACTGatagttgactgagt < 2:477883‑M1/251‑15 (MQ=255) ccAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGAGTTTTGCCACTGattgttgactgagtaacc > 1:323605‑M1/1‑232 (MQ=255) cAACG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTACAATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGCCCCAGAAGGTGTTTTGCCACTGcttgttgactgagtaacccg > 2:551588‑M1/1‑231 (MQ=255) aCG‑GAAAGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGTCGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgactgagtaaccagac < 1:453668‑M1/251‑23 (MQ=255) g‑gAAAGTGTCTGT‑TGTTCCCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgactgagtaaccagacag < 2:469727‑M1/251‑25 (MQ=255) gAAAGTGTCTGT‑TGTTCTCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGTGGTGTCATTACGTAAATGACGCTTGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGTGAATAACCACTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgactgagtaaccagacagt < 2:513204‑M1/251‑26 (MQ=255) aaaGTGTCTGT‑TGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgactgagtaaccagacagtt < 1:236097‑M1/251‑27 (MQ=255) gtCTGT‑TGTTCACCAGGTAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgactgagtaaccagacagttgatgt < 1:302811‑M1/251‑32 (MQ=255) tgttCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGGCATTACGTAAAGTACGCTGGCAATGAAATACGGCTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgtctgagtaaccagacagttgatgtgcacg < 2:441253‑M1/250‑37 (MQ=255) | TGAGTAACTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACAACATTTTCCACGGGGCCAACG‑GAAAGTGTCTGT‑TGTTCGCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGTTTTTCTGGCCGCGTGGAAGTCACCTCTTCCTGCCA > NC_000913/1048367‑1048840 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |