Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,825,0560GA33.3% 57.4 / 13.1 36intergenic (‑119/+84)ves/spyHutD family protein Ves/ATP‑independent periplasmic chaperone
Reads supporting (aligned to +/- strand):  ref base G (23/1);  new base A (1/11);  total (24/12)
Fisher's exact test for biased strand distribution p-value = 2.31e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

ATGCTGGCACGCCAGTAAAAATCACGTTTTGCCGGTGGGAACGTGCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATG‑TTGTAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTT  >  NC_000913/1824819‑1825300
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     
aTGCTGGCACGCCAGTAAAAATCACGTTTTGCCGGTGGGAACGTGCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAAccgc                                                                                                                                                                                                                                          <  1:183907/251‑1 (MQ=255)
        aCGCCAGTAAAAAGCACGTTTTGCCGGTGGGAACGTGCAAATTTCGCGCGTTTCACCGGCAGAATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGCTTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑‑CACACTGTTTG‑AGAAGAGAAAAGAAAACCGCAGATCCTg                                                                                                                                                                                                                                  >  2:593185/1‑251 (MQ=255)
             aGTAAAAATCACGTTTTGCCGGTGGGAACGTGCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCAc                                                                                                                                                                                                                             >  1:97894/1‑251 (MQ=255)
              gTAAAAATCACGTTTTGCCGGTGGGAACGTGCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCAcc                                                                                                                                                                                                                            >  2:741232/1‑251 (MQ=255)
                aaaaaTCACGTTTTGCCGGTGGGAACGTGCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGc                                                                                                                                                                                                                          >  1:221872/1‑251 (MQ=255)
                   aaTCACGTTTTGCCGGTGGGAACGTGCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCAtt                                                                                                                                                                                                                       >  1:441677/1‑251 (MQ=255)
                    aTCACGTTTTGCCGGTGGGAACGTGCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCAtt                                                                                                                                                                                                                       >  1:399629/1‑250 (MQ=255)
                                        aCGTGCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACa                                                                                                                                                                                                     >  1:603010/1‑248 (MQ=255)
                                            gCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCAGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGCAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGCAGTGGACAAGACcgg                                                                                                                                                                                              >  1:256670/1‑251 (MQ=255)
                                                          ttaccccgccaccttttCCCCACATATTCACCGACTTTTTCCGCATATCAA‑TTTTTCCCTCACTGCCCCCCGGCCCTTTCTTTTTTTTTTTATGTTTCAGGTACCCGGGTATGTTTACCGGC‑ACCGGGGGTGTTTTAC‑GTTAGTGGGGAT‑AGG‑TTTTTTTTTACA‑ACTTTTTG‑AAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGtt                                                                                                                                                                                  <  1:512963/235‑1 (MQ=255)
                                                                cGGCAGCTTTCCGCCACAGTTCCACCGACTTTTTCCGCTTATCAAAGTATTCCAT‑CCTCGCCCCGGGCCCTTTTTTTTCATTTTTATCGTTCAGGTACCCGTGGATGGTTATCGGC‑AACTGGGGTGATTTAT‑GTTAGTGGTAATCGGG‑TTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCt                                                                                                                                                                          <  1:570894/251‑1 (MQ=255)
                                                                              cacaGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGGCTTAAGTTTTTTGGGTGAAAGAATATTca                                                                                                                                                             >  1:249399/1‑250 (MQ=255)
                                                                                 aGATTCGCCGACTTTTTACGCATATCAAAGCATTCCAT‑AATCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGAGGATGGTTATCGGC‑ACCTCGGGTGATTTAC‑GTTAGTGGAGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGGAAAAAGAAAACCGGCGATCCTGTCCACCGCATTACTGCCAGGTAGAGGACAAGCCCGTCGGTANTAAATTATTTGGCTCAAAGATTCTTcaca                                                                                                                                                           >  2:338134/1‑247 (MQ=255)
                                                                                      cACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTCAGGTTTTTGGGTGAAAGATTATTCAGCAGTTgg                                                                                                                                                     >  2:576369/1‑249 (MQ=255)
                                                                                                                 ttCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACC‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGGTGGAAGATTTTTTTGCAGGTGCAGGCATTTTACCATTTGccccctggcgg                                                                                                                         >  2:157496/1‑242 (MQ=255)
                                                                                                                        aCTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGCGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTACGTTTTTTGGCGGACAGATTATTCAGCAGATGCCGGACTTTTACATTTTGCCGCTGGACGTTCTGTc                                                                                                                   >  1:106317/1‑251 (MQ=255)
                                                                                                                            ccccccGGCCCTTTTTTTTCATTGTTATTTTTCAGGTACCGGTGGATGGTTCTCGGA‑AACTGGGGTGTTTTACTGTT‑GTGGTGATCAGG‑TTTTTTTT‑ACA‑ACTGTTGG‑AAAAGAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGAc                                                                                                               <  1:549575/248‑1 (MQ=255)
                                                                                                                                       gTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGGCGTTCTGTCAGACGCTTCTCaaa                                                                                                     >  1:602271/1‑250 (MQ=255)
                                                                                                                                           ttttCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTCAGTTTTTTTGCTGAAAGATTATTCAGCAGTTGCAGGCCTTTTACCTTTTTCCGCTGGGCGTTCTGTTCGACGCTTCTCAAAATTa                                                                                                 >  2:258136/1‑250 (MQ=255)
                                                                                                                                              tCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACACGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGAGTTAAGTTTTTTGGCTGAAAGAATATTCAGCAGTGGCCGGCCTTTTTCCTTTTGCCCCTTGAAGTTTCGTAAGACGGTTCTCCAAATTAgact                                                                                             >  2:719079/1‑248 (MQ=255)
                                                                                                                                                     tttCGTTCAGGAAACGGTGGTTGGTTACCGGC‑AACTGGGGTGATTTCC‑TTTGGTGGGGAT‑AGG‑TTTTTTTTTACA‑‑CTTTTTGGAGAAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAAtt                                                                                       <  1:741232/248‑1 (MQ=255)
                                                                                                                                                          ttCAGGTACCCGGGGATGTTTACCGGA‑ATCTGGGGTTATTTAC‑TTTATGGGTAATCAGG‑TTTTTTTT‑CCA‑ATTGTTTG‑AAAAGAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGc                                                                                     <  1:545767/247‑1 (MQ=255)
                                                                                                                                                                 aaCCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAAATAGCATTAAATTGCTTTTTCTGTTc                                                                          >  1:493542/1‑251 (MQ=255)
                                                                                                                                                                  aCCGTGGTTGGTTA‑CGGCCAACTGGGGTGTTTTAC‑TTTAGGGGGTACCAGT‑TTTTTTTT‑AAA‑ATTTTTTA‑AGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTcc                                                                         <  1:153417/251‑1 (MQ=255)
                                                                                                                                                                              tATCGGA‑AACGCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ATTGTTGG‑AGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTCCGGCGTCAGGAt                                                              <  1:628527/250‑1 (MQ=255)
                                                                                                                                                                                  gggaacctggggTGATTGAC‑GTTGGTGGTGGTATGG‑TTTTTTTT‑ACA‑ACTGTTTG‑AAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTCCGGCGTCAGGAtg‑ttg                                                         <  1:397949/242‑1 (MQ=255)
                                                                                                                                                                                    c‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGACGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGCCTTACATTTTTTTGCTGAAAGATTATTCAACCGTTGCCTGCATTTTTACTTTTGCCGGTGGACGTTCTGTCAGACGCTTCTATAAATTAACATTAAATTTCTTTTTCTGTTCCAGCGTCAggcagttgtg                                                        >  2:69369/1‑242 (MQ=255)
                                                                                                                                                                                           gggttaatgtgggTTAGTGGTG‑TGAGGTCTTTTTTT‑ACA‑TTTGTTGG‑AGAAAAAAAAAGAAACCCGCCGATCCTGTCCACCGTATTACTGCAAGGTAGTGGACAAGACCGGCTGTCTTAAGTTTTTGTGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTGTCTGTTCCGGCGTCAGGATG‑TTGTAAAtttt                                                 <  1:470461/239‑1 (MQ=255)
                                                                                                                                                                                                    aC‑GTTAGTGGCGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGCAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGGTTTTTGGTAGAAAGATTAGTCAGCAGTCGCAGGCATTTTACCTTTTTCCGCGTGCCGTTCTGTCAGAGGCCTCTCACAATTAGAATTAAATTGTTTTTTCTGTTCCCGAGTCAGGATG‑TAGTGAATTATGTTCTGGGtt                                       >  2:455202/1‑251 (MQ=255)
                                                                                                                                                                                                        taggtggggATCAGG‑TTTTGTTT‑ACA‑CCTGTGGG‑AGAAAAAAAAAAAAACCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTTCCTTTTGTCGCTGGACGTTCTGTCAGACGCTTATCAAAATTAGCATTAAATTGCTTGTTCTGTTCCGGCTTCAGGATG‑TTGTAAATTTTGTTCTGGGttg                                      <  2:505271/246‑2 (MQ=255)
                                                                                                                                                                                                        gttgggggtgacccgttttttttt‑CCA‑ATTGTTTG‑GGAAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATG‑TTGTAAATTTTGTTCTGGGTTTc                                     <  2:97894/234‑1 (MQ=255)
                                                                                                                                                                                                             ggtgATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGGTTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGGTCTGTCAAACGCCTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTCCGGCGTCCGGATG‑TTGTAAATTTTGTTTTGGGTTTCCAtgtg                               >  1:221816/1‑251 (MQ=255)
                                                                                                                                                                                                              gtgATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCCGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATG‑TTGTAAATTTTGTTCTGGGTTTCCATGTgc                              >  1:620115/1‑251 (MQ=255)
                                                                                                                                                                                                                gATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCCTAAGGTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTTCCTTTTTCCGCCGGGCGGTTTGTCAGACGCTTCTCAAAATTTGCCTTAAATTGCTTTTTTTGTTCCGGCGTCCGGGTGGTTG‑AAATTTTGTTTTGGGGTTcccttttcgg                            >  2:563269/1‑243 (MQ=255)
                                                                                                                                                                                                                            tttt‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGATGAAAGATTATTCAGCAGGTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATG‑TTGTAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCATGtt                   >  1:328303/1‑249 (MQ=255)
                                                                                                                                                                                                                                  cA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGAATTACTGCAAGGAAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGTCCGTAAGGTTATTCAGCAGTTGAAGGCATTTTACCTTTTTCCGCTGGACGTTCTGTCAGACGCTTCCCAAAACTAGCATTAAATTGCTTTTTCTTTTCAGGCGTCAGGAAG‑TTGCAAATTTGTTTCTGGGTTTCCTTGTGCGcccacatttttggtttg            >  2:462640/1‑236 (MQ=255)
                                                                                                                                                                                                                                         attgaggaagaaaaAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATG‑TTGTAAATTTTGTGCTGGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCt        <  2:587047/244‑1 (MQ=255)
                                                                                                                                                                                                                                              agaagagaaAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCCTTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAAATAGCATTAAATTGCTTTTTCTGTTCCGGCGTCCGGATG‑TTGTAAATTTTGTTCTGGGTTTTCATGTGCGCCCGCATGTTAGCTTTGCGCTGttctt  >  1:688359/1‑251 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     
ATGCTGGCACGCCAGTAAAAATCACGTTTTGCCGGTGGGAACGTGCAAATTTCGCGCGTTTCACCGGCAGCATTTCGCCACAGATTCACCGACATTTTACGCATATCAAAGTATTCCAT‑ACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGC‑AACTCGGGTGATTTAC‑GTTAGTGGTGATCAGG‑CTTTTTTT‑ACA‑ACTGTTTG‑AGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATG‑TTGTAAATTTTGTTCTGGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTT  >  NC_000913/1824819‑1825300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑