| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,464,046 | 0 | G | T | 29.2% | 91.8 / 13.7 | 65 | E170* (GAA→TAA) | paaX | DNA‑binding transcriptional repressor PaaX |
| Reads supporting (aligned to +/- strand): ref base G (17/29); new base T (19/0); total (36/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.00e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCATTGTTGCCGGAGGAGTTGCTTCCG > NC_000913/1463796‑1464294 | aGGCTTGCGCCTGACGCGACGGGCAGAAAGTACAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAAGCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTTGCGGATAACGTGATTTGTTTTg < 2:553445/251‑1 (MQ=255)aGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTg < 2:185199/251‑1 (MQ=255) gCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGGTTTGTTTTGa > 1:471935/1‑250 (MQ=255) aCGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATAcc < 1:317807/251‑1 (MQ=255) gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGGGATTTGTTTTTAAGGG‑CAAATACCACTg > 1:624831/1‑251 (MQ=255) aTTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGGGCTTTCTCGCgcagc > 1:614693/1‑251 (MQ=255) cgcAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTTAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCCGCACTGCGTg > 1:674069/1‑251 (MQ=255) agagCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTTAAACG‑CAAATACCACTGGCGCTTTATCGCGCACCACTGCGTGccc > 1:654647/1‑250 (MQ=255) gagCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGCCACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGGTTTGTTTTGAAGCA‑CAAATAACACGGGGGCTTtctaggcaaccactgggggcc > 2:437803/1‑231 (MQ=255) gCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCCCCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCAATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCagag < 1:629113/251‑1 (MQ=255) aCCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTag < 1:192132/251‑1 (MQ=255) gCATGTGATGGTAAATGGCGCCTGTTGCGCTCGGAAGGTTTAGATAATGCTACGCTGGCTGATGGCAAAAAGCAGGTGACCTGGCAAGGTTTTGTCGCACTGGCGCGCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCTATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCGCGCGCAGCACTGCGTTCCAGATTagaata < 2:704089/251‑3 (MQ=255) aTGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGt < 2:674069/251‑1 (MQ=255) ggCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGGCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGGGATTTGTTTTGAAGAG‑CCAAAACCACTGGGGCTTTTTCGCGCAGGACCGCGTGCCCGAGTAGAagagggatggacatttac > 1:603298/1‑236 (MQ=255) gCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTg < 1:632393/251‑1 (MQ=255) ccTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGaa < 1:690986/250‑1 (MQ=255) gTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGGCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACGTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACaa < 2:237084/250‑1 (MQ=255) ctcGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGCTCTGGCAGGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAACCTGGCCGATGTACCGACACTTTTGCATGAAGCGGGGGTGGCGGATAACGTGATTTGTTTTTAAGCG‑CAAATAAATCTGGGGGTTTCTCTCCCCGCACTGCGTGCCCGCGGAGAAGAGTGCTGG‑CATTTAAATGAaaaaaaaacc > 1:428777/1‑246 (MQ=255) cGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGGTTTGTTTTGAAGCG‑CAAAAACCACTGGCGCTTTTTCGCGCAGCACTGCGTGCCAGGGGAGAAAAGTGCTGG‑CATTTCACTGAACAAAAtaccctg > 1:466212/1‑245 (MQ=255) aGGTTGAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACg < 2:262409/251‑1 (MQ=255) aaaTCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACATGATTTGTTTTTAAGCG‑CAAATACCCCCGGCGCTTTCTCGCGCAACCCTGCGTGCCCGAGGAGAAAAGTGCTGG‑GATTTAACTGAACAAAAAGCCATG‑GCCGAAACCttttt > 1:334003/1‑249 (MQ=255) ccaCGCTTGCTGATGTCAAAAAGGAGGTGATNTGGCAAGGTTTTGGCGAACTGGCACCCAGCCTGATGGCATCGCCGGCGCAAAACCTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGAGAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGGAGAAGAGTGCTGT‑CATTTAACTGAACAAAATGCCATG‑TTCGAAACCTTTATTCAg < 2:347754/249‑1 (MQ=255) aacggtggcgtaTGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGGTTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGt < 2:285192/240‑1 (MQ=255) ctggctgATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTTAAGCG‑CAAATACCAATGGCGCTTTCTCGCGCAGCACTGCGGGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAAAAAAATGCCATG‑TACGAAAACTTTATTCAGTCAtt > 1:409773/1‑251 (MQ=255) ctgATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAAAGGGATTTTTTTTGTAGCG‑CAAATAACCCTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGGGTAGAAGAGGGCGGG‑CATTTAACTGAACAAAATGACAAG‑TTCGGAACCTTTATTCAGTCATTccgc > 2:32384/1‑251 (MQ=255) gATGTCAAAAAGCAGTTGATCTGGCAAGGTTTGGGCGCACGGGCCCCCAGCCTGATGGCATCGCCGTCGCAAAACCTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTTTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTTG‑CAGTTAACTTAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTccgc < 2:742246/249‑1 (MQ=255) gTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGGTTTGAAGCG‑CAAATAACACTGGCGCTTTCTCGCGCAGCACTGCGTGCCCGAGGAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCAAG‑TAAGAAAACTTTATTCAGTCATTCCGCCCGCt > 1:457520/1‑251 (MQ=255) aaaaaGCAGTTGATCTGGCAAGGTTTTGGCGCACGGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGt < 2:31469/251‑1 (MQ=255) gATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTTAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTa > 1:225663/1‑250 (MQ=255) aTCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTTAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTTCGTGCCCGAGGAGAAAAGTGCTGG‑CATTTAACTTAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCCCTGGGGCCGC‑ttttta > 2:171545/1‑248 (MQ=255) cTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAACCTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGAAAACGGGGTTTGTTTTTAAGCG‑CAAATACCCATGGCGCTTTCTCGCGCAGCAATGCGTGCCCGAGGAGAAGAGTGCTGG‑CCTTTAACTGAACAAAAAGCCATGGAACGAA‑CCTTTTTTTATGCATTCCGCCCGCTGGTGGCGC‑TTTTaaaa > 1:467966/1‑250 (MQ=255) gtcAAGGTTTTGGCGCAGTTGCACACAACCTGATGGCAGCGCCGTCGAAAATACTGGCCGATGTAGAGACACTTGTGCAGGAATCGGGTGTGGCGGATAACGTTATTTTTTTTGAATCT‑CAAATACCACTGGCGTTTTCTCGCGCAGCTCTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTTTCGGAACAAAATTCCATG‑TACGAAACCTTTATTCATTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAag < 2:297530/247‑1 (MQ=255) gTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGAAAACGGGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCAATGCGGGCCAGAGTAGAAAAGTGCTGG‑CAATTTACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTTAAAGAggcggcc > 1:576143/1‑250 (MQ=255) tttGGCGCACTGGCAACCAGCCTGATGGCATCGCCGTCGCACAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTTTTTTGAAGGG‑CAAATACCACTGGGGCTTTCTCGCGACGCACTCCGTGCCAGAGTAGCAAAGGGGTGGGCTTTTAA‑TGAACAAAAAGGCCTG‑TACGACACCTTTATTCAGTAATTCCGCCCGCTGGGGCAGCCTTTTAAAA‑AGGCGGCa > 2:708022/1‑249 (MQ=255) ggCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTATCTGAACAAAATGCCATG‑TACGAAACCTTTATGCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACg < 2:624831/250‑1 (MQ=255) cACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTTGTTTGTTTTTATGCG‑CAAAAAACACTGGCGCTTTTTCCCGCCGCAATGCGGGGCAGAGGAGAAGAGTGGTGG‑CATTTAACTGAACAAAATGCCCTG‑GACGAAACCTTTATTCCGCCCGTTCGCCCCCAGGTGCCGC‑CTTTTAAAGAGGCGGCCG‑ACGAGtt > 2:63917/1‑250 (MQ=255) ggCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTTAAGCG‑CAAATACCACCGGCGCTTTCTCGCGCAGCACTGCGGGCCAGAGGAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTTAAAGAGGCGGCAG‑ACGAGTTAAccc > 1:361812/1‑251 (MQ=255) ggCACCCAGCCTGAAGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGAGTTGTTTTTAAGCC‑CAAAAACCACTTGCGCTTTCTCGCGCAGCCCTGCGTGCCAGAGGTGAAAAGTGCTGG‑GATTTAACTGAATAAAATACCATT‑AACGAAACCTTTATTTCGTCATTCCGCCCCCCGGGGCCGC‑TTTTAAAAGAGGCGGCAG‑CCGAGTTAAccc > 2:325893/1‑251 (MQ=255) aCCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCgg < 1:655998/251‑1 (MQ=255) cccAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGGGGTTTGTTTTTAAGCG‑CAAATACCCCTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGGAGAAGAGTGCTGG‑CATTTTACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTTAAAGAGGCGGCAG‑ACGAGTTAACCCCggg > 1:575810/1‑250 (MQ=255) ggCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTc < 1:570130/251‑1 (MQ=255) aTCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGGGATTTGTTTTTTAGCG‑CAAATACCACTTGCGCTTTCTCGCGCCGCCCTGCGTGCCAGGGGAGAAGAGGGGTGG‑CCTTTTACTGAACAAAAAGACCTG‑TACGCAACCCTTATTTCGTTCTTCCCCCCGCTGGTGCCGC‑TTTTTAAAGAGGCGGGNGCAC‑AGTTAACCCCCGGGCGGGCGATTTctt > 2:377918/1‑249 (MQ=255) cGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATAtt < 2:32471/251‑1 (MQ=255) gCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGACGGATAACGTGATTTGTTTTTAAACG‑CAAATACCACTGGCGCTTTCTCGCGCAGACCTGAGTGCCAGAGTAGAAGAGTGCCGG‑AGTATAAATGAACAAAATGCCATG‑TACCAAACCTTTATTCACTCATTTCCCCCGCAGGTGGCCC‑TTTTTAAAAAGGCGGCAG‑ACGAGTTAACCCCGGAGGGGGC‑ATTTCATAttt > 1:472777/1‑250 (MQ=255) ccGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTTAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGGTAACCCCGGCGCGGGC‑ATTTTATAttt > 1:761674/1‑249 (MQ=255) cGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGAGGCGGATAACGTGATTTTTTTTTAAGGG‑CAAATACCACTGGCGCTTTCTCGCGCCGCACTGGGGGCCCGAGCAGAAGGGTGCTGG‑CATTTAACTGCACAAAATGCCCTG‑TACGAAAACTTTATTCAGTCATTCCGCCCGCTGGCGCCGC‑TTTTAAAAGAGGCGGCCG‑ACGAGGTAACCCCTGAGCGGGC‑ATTTCTAATTCAGCtt > 2:763297/1‑251 (MQ=255) aaCTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTTAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGGGCTGG‑CATTTAACTGAACAAAAAGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGGTAACCCCGGAGCGGGC‑ATTTCATATTTCGCTTTTACTg > 1:562282/1‑251 (MQ=255) ggCCGATGTACAGACTCTTTTGCAGGAAGCGNGGGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACGGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGagcc < 2:334003/251‑4 (MQ=255) ggCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGAt < 1:362497/249‑1 (MQ=255) cctattgaCAGACACTTTTGCAAGAAGCTGGTGTGGCGGATAACGGGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACGGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGGTAACCCCGGAGCGGGC‑TTTTCATATTCAGCTTTGTCTGATCCAt < 2:457520/244‑1 (MQ=255) ccGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGGTTTGTTTTTAAGCG‑CAAATACCACTTGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGGGTTAACCCCGGCGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCAt > 1:677376/1‑251 (MQ=255) cAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGGGCTGG‑CATTTAACTGAACAAAATGCCCTG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCg > 1:202689/1‑251 (MQ=255) gACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGcc < 1:437803/251‑1 (MQ=255) cacTTTTGCATGAAGCGGGTGTGGCGGATAACGTGTATTGTATTTAAGCGGCAAA‑AACACTGGCGGTTTTTCGCGCAGCCATGCGTGGCCGGGTTGAAGAGTGCTGG‑CATTTTACTGAAAAAAATTCCATG‑GACGCAACCTTTTCTCAAGCATTACGACCCCCGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑AAGGGTTAACCCCGGGGCGGGC‑AATTCATTTTTAACTTTTACTTGTCCCTTTTTATCTCCgg > 2:602913/1‑250 (MQ=255) tGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTgtcgt < 2:761674/250‑1 (MQ=255) aggAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGGGCCGC‑GTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCtt < 2:471935/249‑1 (MQ=255) aTGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTTTCGCCGTGTCGTCCtt > 1:206396/1‑251 (MQ=255) gaggtgggTGTGGCGGAGAACGTGATTTGTTTGGAAGCG‑CAAATTCGACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGATTAGTGCTGG‑CATTTTACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCTTGCCGCCCGGTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑CCGTTTTTCCCTCGGTGCTGGC‑ATTTCATATTGAGCGTTTACTGCTTCATTTTTGTCGCCGTTTCGGCCttg < 2:428777/245‑2 (MQ=255) cGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGAc < 1:528299/251‑1 (MQ=255) gtgGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCAt < 1:171545/250‑1 (MQ=255) cGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAACACTGCGTGCCAGAGTAGCATCGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGAGGCAG‑ACGAGTTAACCCCGCAGCGGGC‑CTTTCTTATTCAACTTTTACTGATCCATTTTTATCGCCGTGTCCTCCTTAAAGACCCAttgttt > 2:300051/1‑250 (MQ=255) ggATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCATTGTTGc > 1:106983/1‑251 (MQ=255) aTAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTGATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGTC‑AGTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACTCATTGTTGCCg < 1:369885/251‑1 (MQ=255) tttGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCATTGTTGCCGGAGGAGTTg > 1:29327/1‑251 (MQ=255) tGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGATTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAATCCTTTATTCAGTCATGCCGCCCGCTGGTGCCTC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGTGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCATTGTTGCCGGATGAGTTGc < 2:676953/250‑1 (MQ=255) gTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCATTGTTGCCGGAGGAGTTGCtt > 1:270032/1‑251 (MQ=255) ttGAAGCG‑CAAATACCACTGGCGCTTTATCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCATTGTTTCCGGAGGAGTTGATTCCg > 2:461439/1‑251 (MQ=255) | AGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCG‑CAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG‑CATTTAACTGAACAAAATGCCATG‑TACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGC‑TTTTAAAAGAGGCGGCAG‑ACGAGTTAACCCCGGAGCGGGC‑ATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCATTGTTGCCGGAGGAGTTGCTTCCG > NC_000913/1463796‑1464294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |