| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 81 [0] | [0] 84 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 81 (0.830) | 72/492 | 0.1 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
TCGACCAGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGC > NC_000913/2789715‑2790212 | atgtaggaatttcggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccgcg > 1:613185‑M2/249‑251 (MQ=255) ggaatttcggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgtttggcctaaacgcagggagactccccGCGCaa > 1:40744‑M2/244‑249 (MQ=255) atttcggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGa > 1:706731‑M2/241‑250 (MQ=255) ggacgcgggttcaactcccgccagctccaccaaacttctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcacaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTg > 2:584018‑M2/236‑249 (MQ=255) gacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGc > 1:542423‑M2/235‑251 (MQ=255) gggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcataaacgcagggagactccccGCGCACAGGAATTGAGCGGATg > 2:163820‑M2/230‑251 (MQ=255) aactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGAt < 1:309979‑M2/28‑1 (MQ=255) cgaaggttactatgatgatattctccatcggtgattaccagaggcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcgtttttgtgccctcaatttgtcccgcgaagtgcgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctagtgtttacgttgggcctaaacgcagggagactccccGAGCAAAGGAATTGAGCGGATGTATGAtttt < 2:33317‑M2/31‑1 (MQ=255) atccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccatcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGCATTGCGCGGATGTATGAtttt > 2:737920‑M2/221‑251 (MQ=255) ccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTtgt < 2:21085‑M2/33‑1 (MQ=255) cagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGatt < 1:272873‑M2/37‑1 (MQ=255) caaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGa < 2:36632‑M2/15‑1 (MQ=255) caaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGa > 1:36632‑M2/206‑220 (MQ=255) aaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTggcggcgg > 2:582510‑M2/204‑251 (MQ=255) ccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgacccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGcatcat < 1:298400‑M2/54‑1 (MQ=255) gagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑t > 1:87102‑M2/181‑242 (MQ=255) gagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑t < 2:87102‑M2/62‑1 (MQ=255) gagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑Tcgaccccc > 1:667576‑M2/181‑247 (MQ=255) agtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagaggactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATcatcggcttg‑tggtccgacac > 2:433685‑M2/180‑241 (MQ=255) catccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgacgtccgaagagcactaattaaatacgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGGATGCTTTTGTGATTATTGGCGGCTGCATCCTCGGCATGCTCG‑CCGCCATgcc > 2:43894‑M2/177‑250 (MQ=255) ccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATT‑TCGACCGCCATGCAACt < 2:479626‑M2/78‑1 (MQ=255) tgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACtgatt > 1:91296‑M2/170‑251 (MQ=255) gaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACtgattg > 1:581673‑M2/169‑251 (MQ=255) gtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCCTG‑TCGACCGCCATGCAACTGATTGATg > 1:21059‑M2/166‑251 (MQ=255) cctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTc < 2:613185‑M2/88‑1 (MQ=255) aagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgcagagaactaattaaatccgaaccttttaggcccattgctaggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGGGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGGACCTGATTGGTGtcttt > 2:763814‑M2/161‑249 (MQ=255) cacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCAGG‑TCGACCGCAATGCACATGATTGATGTATATCCGGGCGcc > 2:599998‑M2/152‑251 (MQ=255) gtaagccctgcgggcttttttgttccctcaatttgccccgctaagtccgaatagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacggtgggcctaaacgcagggagactccccGCGAAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGTCGGCATCATCTGCATG‑TCGACCGCCAGGCAACGGATTGATGTCTAGCCGGACGCCCGCAtt < 2:613678‑M2/106‑1 (MQ=255) caatccatgcgggcttttttgtgccctcaatttgtcccgcgaagtctgaatagaactaatgaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactcctcGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCAGCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCACGCATTg < 1:302982‑M2/107‑1 (MQ=255) gccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGt < 1:756719‑M2/110‑1 (MQ=255) ccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGtt > 1:407505‑M2/141‑251 (MQ=255) cctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaatttaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCTGACGcccgcattatctcg > 2:727179‑M2/140‑245 (MQ=255) cctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTAGTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCTGACGCCCGCAtt < 1:727179‑M2/106‑1 (MQ=255) gtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccgtttaggcccatggagaggcccaacgaaaagctctattgtttacggttggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCTGCAGCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCAGTGCTTTGCTGGAAAAAGAGTc < 2:40744‑M2/126‑1 (MQ=255) ccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGcc < 1:203471‑M2/130‑1 (MQ=255) atgtgtcacgcgtagtcagaagagaacttattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCTCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGCGTCCGCCCCGGcc < 2:736682‑M2/136‑1 (MQ=255) gtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTc < 2:141739‑M2/140‑1 (MQ=255) ccgcgaagtccgaagagaactaattaactccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttggtcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGAGTGTGTGATTATTGGCGTCGTCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTAGCCGTACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCtgtcccc < 2:706731‑M2/143‑4 (MQ=255) cgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGa < 2:542423‑M2/146‑1 (MQ=255) gaagtccgaagagaactaattaaatccgaaccgtttaggcccattgataggcccaacgaaacgctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGGCCGCCCCGGCCTGTCACCAGAc < 1:631043‑M2/147‑1 (MQ=255) aagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACg > 1:380753‑M2/104‑251 (MQ=255) agtccgaagagaactaattaaatccgaaccttttaggcccatggataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACgg < 2:34655‑M2/149‑1 (MQ=255) gtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttatgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTTTCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGCCggg > 2:269060‑M2/102‑251 (MQ=255) tccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCCACCGCCATGCAACTGATTGGTGGCTATCCGGACGCCCGCCTTGCGTTGCTGGAAAAAGCGTCCGCCCCGGCCTGGCACCAGACGGGc > 2:509701‑M2/101‑251 (MQ=255) ccgaagagaactacttaaatccgaaccttttaggcccattgataggcacaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGCTTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCTTTGCAGGAAAAAAATGCCGCCCCGGCCGGTCACACGACGGGcc > 2:599963‑M2/100‑251 (MQ=255) gaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGGCACCAGGCGGGCca‑c > 2:17313‑M2/98‑251 (MQ=255) gaagagaactaattaaatccgaacctttaaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCca‑c < 1:308297‑M2/154‑1 (MQ=255) gagaactaattaaatccgaaccttttaggcccattgataggcccaacaaaaagctctattgtttacgttgggcataaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGGGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATGGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCa‑caac < 1:737920‑M2/157‑1 (MQ=255) gaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCCTCATCGGCATG‑TCGACCGCCCTGCAACTGATTGATGTCTATCCGGACGCCCGCATTTCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCc‑caac > 2:485442‑M2/93‑249 (MQ=255) aactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAgc > 1:414272‑M2/92‑251 (MQ=255) taattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCCAGACGGGCCA‑CAACAgcggc > 1:572485‑M2/89‑251 (MQ=255) ttaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTg > 1:226903‑M2/86‑251 (MQ=255) aaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGAt < 1:763814‑M2/168‑1 (MQ=255) aatccgaaccttttaagcccattgatcggcacaacgaaaagctctattgtttacgttgggcctcaacgcagggagcctccccGAGCCAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGCCATCATCGGAATT‑GCGACCGCCATGACACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGGCCGCCCCGGCCTGTCACCAGACGGGCCA‑caacagcggcggaatc > 2:699380‑M2/83‑246 (MQ=255) atccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCACAGGAATTGAGCGGATGTATGATTTTGGGATTATTGGCGGCGGCATCATCGGCATG‑TCGCCCGCCAAGCAAATGCTTTATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTgatac > 2:476621‑M2/82‑249 (MQ=255) aggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTCTGATTTTGTGATTATTGGCGGCGGCATCCTCGGCATG‑GCCACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTTCTGGAACAAGAGTCCGACCCGGCCTGTCACCAGAAGGGCCA‑CAAAACcggcgtgatccactacgggttct > 2:585136‑M2/69‑239 (MQ=255) ggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCCAGACGGGCCC‑CAACAGCGGCGGGATCCATGCCGGGGGCTAt > 2:112159‑M2/68‑251 (MQ=255) ggcccatggataggcccaacgaaaggctctattgtttacgttgggcctaaacgcagggagcctccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTAt < 1:163820‑M2/184‑1 (MQ=255) cccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGCTGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTattt > 1:195748‑M2/66‑250 (MQ=255) cattgataggcccaacgaaaagctctattttttacgttgtgcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATACGGACGCCCGCTTTGCGTTGCTGGAAAAAAAGTCCGCCCCGGCCTGTCACCCGACGGGCCA‑CAACAGCGGCGTGATCCACACCGGGGCCTATtacc > 2:545833‑M2/64‑250 (MQ=255) tgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagaatccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGGGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCACGCCGGGGTCTATTACACg > 1:333307‑M2/61‑250 (MQ=255) ccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCCACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGc > 1:656403‑M2/53‑251 (MQ=255) ccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGc > 1:138393‑M2/53‑251 (MQ=255) cgaaaagctctattgtttccgttgggcctaaacgcagggagactccccGCGAAAAGGAATTGAGCGGATGTATGATTTTGTGATTATGGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGa < 1:330246‑M2/203‑1 (MQ=255) aaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGa > 1:604562‑M2/47‑249 (MQ=255) gctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAACAAGAAGCCGCCCCGGCCTGTCCCCAGACGGGCCACCAAC‑GCGGCGTGGTCCATGCCGGGGTCTTTTCCCCgtccggcagccgtaaagcgc > 2:667820‑M2/43‑242 (MQ=255) gctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGgcgc < 1:100151‑M2/209‑1 (MQ=255) gctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGGCTATTACACGTCCGGCAGCCTGAAGgcgc > 1:306129‑M2/43‑251 (MQ=255) tctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTTCACGTCCGGCAGCCTGAAGgcgc > 2:744695‑M2/41‑249 (MQ=255) tctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGgcgc > 1:701092‑M2/41‑249 (MQ=255) ggtttactttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGCCCTCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGCCCGCCCCGGCCTGTCGCCAGACGGGCCA‑CAACAGCGGCGTGATCCATTCCGGTGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGtttt < 1:582510‑M2/215‑1 (MQ=255) gggcctcaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTTGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACCGCGGCGTGATCCATGCCGGGGTCTATTACACCTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGcgggg > 2:607325‑M2/26‑250 (MQ=255) gggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCCTGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGcgggg > 1:184274‑M2/26‑250 (MQ=255) gggcctaaacgaagggagactccccgcgcAACGGAATTGCGCGGATGTATGCTTTTGTGATTATTGGCGGCGGCATCAGCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCCGTCACCCGACGGGCCG‑CAACAGCGGCGGGGACCCTGCCGGGGTCCACTCCACGTCCCGCACCCTGAAAGCGCAGCTTTTCCCGGCggg > 2:457740/26‑250 (MQ=255) aaacgcagggagactccccGCGCAAAGGANTTGAGCGGATTTATGATTTTGGGATTATGGGCGGCGCCATCATCGGAATG‑TCGACCGCAATGCAACTGATTGATGTCTATCCGGACGCCCGCATGGCGTTGGTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAAcc < 2:380753‑M2/230‑1 (MQ=255) aaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACcgc > 1:753503‑M2/20‑251 (MQ=255) acgcagggagactcaccgcgcACAGGCATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCCACTGATTGGTGTCTATCCGGCAGCCCGCATTGCGTTGAGGGAAAAAGCGTCCGCCCCGGGCTGTCCCCAGGAGGGACA‑CAACAGCGGCGTGAGCCATGCCGGGGACTATTACAAGTCCGGCAGCCTAAAGGCGAAGATTTGCCTGGAGGGAAACCccgc > 2:128494/18‑251 (MQ=255) gcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGACC‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTAAACGTCCAGCAGCCTTCAAGCGCAGTTTTGCCTGGCGGGCAACCCCGcc > 2:401261‑M2/16‑250 (MQ=255) gcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCCCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTAAACGTCCGGCAGCCTGAAGGCGCCGTTTTGCCTGGCGGGAAACCGCgccc > 2:459131‑M2/16‑250 (MQ=255) cagagagcctccccGCGCAAAGGAATTGAGCGGATGTTTGATTTTGTGATTATTGGCGGCGGCATCATCGTCATG‑TCGACCGCCATGCAACTGATTGATGTCTACCCGGACGCCCACATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGccac < 1:357869‑M2/237‑1 (MQ=255) agggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGccacc > 1:47542‑M2/14‑251 (MQ=255) actccccGCGCAAAGGAATTGAGCGGATGTCTGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGCTGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCC‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAACGCGCAGTTTTGCCTGGCGGGAAACCGCGCCCCCAAAGcc > 1:673315‑M2/8‑251 (MQ=255) cgcgcAATGGAAGTGAGCGGATGTAGGATGGTGTGATTATGCGCGGCGACATCGTGGGCATG‑TCGACCCCCAGGCATCTGATTGATGTCTACCCGTCCGCCCGCATTGCGTTGCGGGAAAAAGAGTCCGCCCCGCCCTGCCACCGGACGGTCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGc < 2:333307/250‑1 (MQ=255) cGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGc > 1:712340‑M2/2‑251 (MQ=255) | TCGACCAGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATG‑TCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCA‑CAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGC > NC_000913/2789715‑2790212 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |