Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,578,950 Δ6,094 bp [yhhW][yrhB] [yhhW], yhhX, ryhB, yhhY, yhhZ, yrhA, insA6, insB6, yrhA, yrhD, [yrhB]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3578950 3585043 6094 70 [0] [0] 70 [yhhW]–[yrhB] [yhhW],yhhX,ryhB,yhhY,yhhZ,yrhA,insA6,insB6,yrhA,yrhD,[yrhB]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 35789490 (0.000)70 (0.720) 61/492 0.2 100% intergenic (‑223/+1) gntR/yhhW DNA‑binding transcriptional repressor GntR/quercetin 2,3‑dioxygenase
?NC_000913 3585044 = 0 (0.000)intergenic (+1/+37) yrhB/ggt putative heat shock chaperone/glutathione hydrolase proenzyme

GGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAAT  >  NC_000913/3578709‑3579187
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                              
gggTCTTTTCTTTTGCATCGTCCTGAAGGTACAAAAGAGATAGATTCGCTTAGTTTAACACGGACACATCAGAACCTGCCCGGGGAAAACAGTGCTTTTTTACAATTATTAGATATACACTAAATCAATTGCCTCGCATTGGGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCCGGCTTCAAAGATGCCGTTGAGTTcaaaatagcc                                                                                                                                                                                                                                      <  2:407574‑M1/251‑11 (MQ=255)
 ggTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagc                                                                                                                                                                                                                                       <  1:537245‑M1/249‑10 (MQ=255)
  gTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccct                                                                                                                                                                                                                                    <  2:588737‑M1/251‑13 (MQ=255)
           ttttCATCGTCCTGAAGGTACAAAATAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGTCCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctctgccc                                                                                                                                                                                                                              <  2:592190‑M1/248‑19 (MQ=255)
           ttttCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttccc                                                                                                                                                                                                                              <  1:217286‑M1/248‑19 (MQ=255)
             ttCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacga                                                                                                                                                                                                                          <  2:232184‑M1/250‑23 (MQ=255)
               cATCGTCCTTAAGGTACAAAAGAGATATATTCTCTTAGTTTAACACTGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATGAGATAGACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCTTACATCAGCACGCGACCGGAGCGAGCGATTAAGCCTGCAAAAAGGCAGGCTTCAAAGATGACGTTGAGTTcaaaatagccctcttcccacgaag                                                                                                                                                                                                                        <  2:6881‑M1/250‑25 (MQ=255)
               cATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAACGGCAGGCTTCAAAGATGCCGTTGAGTGcaaaaaagccctcttcccacga                                                                                                                                                                                                                          >  2:143655‑M1/1‑226 (MQ=255)
                  cGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagaggg                                                                                                                                                                                                                    >  1:596114‑M1/1‑223 (MQ=255)
                   gTCCTGAAGGAACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggc                                                                                                                                                                                                                   >  1:218905‑M1/1‑222 (MQ=255)
                         aaGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGATGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaa                                                                                                                                                                                                                                            <  2:436149‑M1/220‑5 (MQ=255)
                         aaGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaa                                                                                                                                                                                                             <  2:625176‑M1/251‑36 (MQ=255)
                         aaGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaa                                                                                                                                                                                                                                            >  1:436149‑M1/1‑216 (MQ=255)
                          aGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaac                                                                                                                                                                                                            <  1:190284‑M1/251‑37 (MQ=255)
                                     agatagatTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgc                                                                                                                                                                                                                >  2:183528‑M1/1‑204 (MQ=255)
                                     agatagatTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgc                                                                                                                                                                                                                <  1:183528‑M1/236‑33 (MQ=255)
                                       atagatTCTCTTAGTTGAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgc                                                                                                                                                                                               <  2:244504‑M1/251‑50 (MQ=255)
                                          gatTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTATATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgt                                                                                                                                                                                            >  1:137746‑M1/1‑199 (MQ=255)
                                             tctcTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgtta                                                                                                                                                                                          >  1:220712‑M1/1‑196 (MQ=255)
                                              ctctTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACAATAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtacaccgccgttaa                                                                                                                                                                                         >  1:587394‑M1/1‑195 (MQ=255)
                                                        aaCACGGACACATCCGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGCGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgccaacattagtaccacgccgttaaatcatccaccg                                                                                                                                                                              >  2:113458‑M1/1‑185 (MQ=255)
                                                          cacGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatcaaccgcg                                                                                                                                                                            >  2:112661‑M1/1‑183 (MQ=255)
                                                              gACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATAAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcg                                                                                                                                                                        >  1:290987‑M1/1‑179 (MQ=255)
                                                                 acaTCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggt                                                                                                                                                                     >  1:371398‑M1/1‑176 (MQ=255)
                                                                        aaCCTTCCCGGGGAAAACAGGGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGACGATGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcaaccaccgagcgcgggtcggatgc                                                                                                                                                              >  2:403086‑M1/1‑169 (MQ=255)
                                                                                  gggAAACCAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaac                                                                                                                                                    >  2:515071‑M1/1‑159 (MQ=255)
                                                                                    gAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactc                                                                                                                                                  >  2:137938‑M1/1‑157 (MQ=255)
                                                                                    gAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactc                                                                                                                                                  >  2:133723‑M1/1‑157 (MQ=255)
                                                                                      aaaCAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaacccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcac                                                                                                                                                >  1:361413‑M1/1‑155 (MQ=255)
                                                                                            tGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgngggtcggatgcgccgtacaactcaccgtccg                                                                                                                                          >  2:371746‑M1/1‑149 (MQ=255)
                                                                                                  tttACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggccca                                                                                                                                     >  1:306413‑M1/1‑143 (MQ=255)
                                                                                                               gATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCACGGAAGCGTACCTCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCCGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagcgggccgctaaccttagtacccctccgctaaatcatccaccgagcgcgggtcggatgcgccgcacaactcaccggccggcccaacaataaagctttg                                                                                                                       >  2:51443‑M1/1‑130 (MQ=255)
                                                                                                               gATATACACTAAATCAATTGCATCGCATTGTGCTAACGAAGCGGAAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCAGCAAAAAGGCAGGCTTCCAAGATGCCGTTGAGTTcaaaatagccctattcccacgaagagggccgctaaccttagtaccccgccgataaatcatccaccgagcgcgggccggctgcgacgtacaactcaccgtccggcccaaccatactgctttt                                                                                                                       >  2:37013‑M1/1‑130 (MQ=255)
                                                                                                                atatACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataattctttgg                                                                                                                      >  2:665302‑M1/1‑129 (MQ=255)
                                                                                                                  ctacACTAAATCAATTGCATCGCATTGTACTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACAGGAGCGAGCGAGGAACCCTGCAAAAAGGCAGGCTTAAAAGATGCCGTTGAGTTcaaaatagccctcttcccacggagagggccgctaaccttagtaccccgccgttaaatcatccaacgcgcgcgggtagtatgcgccgcacaactcaacgtccggccaaaccattctgacttggtt                                                                                                                    >  2:408880‑M1/2‑127 (MQ=255)
                                                                                                                   taCACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactncccgtccggcccaaccataatgctttgtgt                                                                                                                    >  2:338606‑M1/1‑126 (MQ=255)
                                                                                                                   taCACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgt                                                                                                                    >  1:442134‑M1/1‑126 (MQ=255)
                                                                                                                    acacTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggctgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtac                                                                                                                  >  2:68816‑M1/1‑125 (MQ=255)
                                                                                                                         aaaTCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgagtactgccc                                                                                                             >  1:244892‑M1/1‑120 (MQ=255)
                                                                                                                            tCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgcagagggccgctaaccttcgtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccacccataatgctttgtgtactgcccatc                                                                                                          >  2:6372‑M1/1‑117 (MQ=255)
                                                                                                                             cAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgccttgtgtactgcccatcc                                                                                                         >  2:606586‑M1/1‑116 (MQ=255)
                                                                                                                                   cATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctt                                                                                                   >  1:4932‑M1/1‑110 (MQ=255)
                                                                                                                                       gCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttc                                                                                                 >  1:567319‑M1/1‑106 (MQ=255)
                                                                                                                                        cATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttccgc                                                                                              >  2:404138‑M1/1‑105 (MQ=255)
                                                                                                                                                 aaCGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttc                                                                                     >  1:407410‑M1/1‑96 (MQ=255)
                                                                                                                                                   cgacgCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctg                                                                                   >  1:211127‑M1/1‑94 (MQ=255)
                                                                                                                                                    gacgCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctg                                                                                   >  1:622413‑M1/1‑93 (MQ=255)
                                                                                                                                                    gacgCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagaggaccgctaaccttagtaccccgccgttagatcatccaccgggcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgcacngcccctcgcctccttcagcgccactttctg                                                                                   >  2:395915‑M1/1‑93 (MQ=255)
                                                                                                                                                       gcgGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGCGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgacct                                                                               >  1:671348‑M1/1‑90 (MQ=255)
                                                                                                                                                       gcgGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgacct                                                                               >  1:331750‑M1/1‑90 (MQ=255)
                                                                                                                                                         ggCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTccaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttt                                                                             >  2:258542‑M1/1‑88 (MQ=255)
                                                                                                                                                           cAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttg                                                                           >  2:420357‑M1/1‑86 (MQ=255)
                                                                                                                                                            aaaaCCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgc                                                                          >  1:217403‑M1/1‑85 (MQ=255)
                                                                                                                                                              aaCCCCGGAAGCGCACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGCGTTcaaaatagccctcttcccacgaagagggccgctaaccttcgtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgctt                                                                        >  2:736207‑M1/1‑83 (MQ=255)
                                                                                                                                                                  ccGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttcc                                                                      >  1:213470‑M1/1‑79 (MQ=255)
                                                                                                                                                                     gAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagc                                                                   >  1:6081‑M1/1‑76 (MQ=255)
                                                                                                                                                                     gAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagc                                                                   >  2:127782‑M1/1‑76 (MQ=255)
                                                                                                                                                                          gTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttg                                                             >  1:511887‑M1/1‑71 (MQ=255)
                                                                                                                                                                                 aGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtat                                                      >  2:399144‑M1/1‑64 (MQ=255)
                                                                                                                                                                                   cACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccg                                                   >  1:233390‑M1/1‑62 (MQ=255)
                                                                                                                                                                                        gACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggct                                               >  1:189631‑M1/1‑57 (MQ=255)
                                                                                                                                                                                                cgagcgagGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaacccttt                                      >  1:719528‑M1/1‑49 (MQ=255)
                                                                                                                                                                                                     gagGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatatccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgctaccagcagcttgagcgtatccgggctaaacccttttacg                                  >  1:56883‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                     gagGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttaccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccatcatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagaagcttgagcgtatccgggctaaaccctttttcg                                  >  2:654260‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                          aGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacgc                            >  1:313134‑M1/1‑39 (MQ=255)
                                                                                                                                                                                                               gCAAAAAGGCAGGCTTCAAAGATGCCGTTGCGTTcaaaatagccctattcccacgaagagggcagctaaccttagtaccccgccgttacatcatccaccgagcgcgggtcagatgcgccgaacaactcaccgtccggcccaaccataaagctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagagtatccgggctaaacccttttccgacccgcatctc                       >  2:569692‑M1/1‑34 (MQ=255)
                                                                                                                                                                                                                     aggcaggcTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgacgagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacgcagctcgtccgg                 >  2:603095‑M1/1‑28 (MQ=255)
                                                                                                                                                                                                                        caggcTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacgcagctcgtccggca               >  1:538263‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                                                  aGATGCCGTTGAGGTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacgcagctcgtcccgcaacccctgatgg    >  2:225838‑M1/1‑15 (MQ=255)
                                                                                                                                                                                                                                    aTGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacgcagctcgtccggcaaccactgatggtg  >  1:136156‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                              
GGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAAT  >  NC_000913/3578709‑3579187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: