Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,066,152 Δ12,778 bp insH6[yoeF] insH6, yoeA, insD3, insC3, yoeA, isrC, flu, yeeR, yeeS, yeeT, cbeA, cbtA, yeeW, [yoeF]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2066152 2078929 12778 55 [0] [1] 57 insH6–[yoeF] insH6,yoeA,insD3,insC3,yoeA,isrC,flu,yeeR,yeeS,yeeT,cbeA,cbtA,yeeW,[yoeF]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20661510 (0.000)55 (0.560) 52/490 0.4 100% intergenic (‑387/+154) cobU/insH6 cobinamide‑P guanylyltransferase/cobinamide kinase/IS5 family transposase and trans‑activator
?NC_000913 2078930 = 0 (0.000)coding (356/357 nt) yoeF putative uncharacterized protein YoeF

CGAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATGCACTAGGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGT  >  NC_000913/2065901‑2066380
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                     
cGAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTAt                                                                                                                                                                                                                                       >  1:121801/1‑251 (MQ=255)
       aGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcg                                                                                                                                                                                                                                >  2:765431‑M1/1‑244 (MQ=255)
           ggCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattg                                                                                                                                                                                                                            <  2:760599‑M1/251‑12 (MQ=255)
             cATTACGGAATAGCCAGACTGTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggt                                                                                                                                                                                                                          <  2:301532‑M1/251‑14 (MQ=255)
                 aCGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctc                                                                                                                                                                                                                      <  1:671827‑M1/251‑18 (MQ=255)
                 aCGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttct                                                                                                                                                                                                                       <  2:322523‑M1/250‑17 (MQ=255)
                  cGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcg                                                                                                                                                                                                                     <  2:648534‑M1/251‑19 (MQ=255)
                  cGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcg                                                                                                                                                                                                                     >  1:468613‑M1/1‑233 (MQ=255)
                     aaTAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatg                                                                                                                                                                                                                 >  2:459011‑M1/1‑229 (MQ=255)
                        aGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatg                                                                                                                                                                                                                 >  1:428130‑M1/1‑227 (MQ=255)
                              aatttctCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATATGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTCTaatttagattggttctcggttgaggatgat                                                                                                                                                                                                         >  2:96786‑M1/3‑221 (MQ=255)
                                     cGTGTTAACGTCCGACAAAATTCGTCATTGACATCGGGTTCTGTGGATTGACACATGTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTAGTGATTCAACGTCAGCGACAGAGCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAAGGGTGGCGACTATaatttcgattggttcttggatgaggattatgacggtg                                                                                                                                                                                                  <  2:116151‑M1/251‑38 (MQ=255)
                                          tAACGTCCGACAAAATGCGTCAATGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaagttcgattggttctcggatgaggatgatgacggtgatac                                                                                                                                                                                              <  2:216825‑M1/250‑42 (MQ=255)
                                                  gACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagata                                                                                                                                                                                       >  2:495244‑M1/1‑201 (MQ=255)
                                                                              ggtggATTGACACAGTTCATTCAGATAATGAAGTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggc                                                                                                                                                         <  2:126772‑M1/250‑79 (MQ=255)
                                                                                      gACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggtgctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagtgttgccgggcaaccctc                                                                                                                                                  <  2:428130‑M1/250‑86 (MQ=255)
                                                                                           aTTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattga                                                                                                                                             >  1:524413‑M1/1‑160 (MQ=255)
                                                                                             ttcattcaGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctc                                                                                                                                                                                                                      <  1:119986‑M1/175‑18 (MQ=255)
                                                                                             ttcattcaGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGAGGCGACTATaatttcgattggttctc                                                                                                                                                                                                                      >  2:119986‑M1/1‑158 (MQ=255)
                                                                                               cattcaGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataa                                                                                                                                         >  1:374996‑M1/1‑156 (MQ=255)
                                                                                                      aTAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacggga                                                                                                                                  >  2:411388‑M1/1‑149 (MQ=255)
                                                                                                           gAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattact                                                                                                                            >  1:592782‑M1/1‑144 (MQ=255)
                                                                                                            aaTTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGCCTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacggaaattactt                                                                                                                           >  1:100835‑M1/1‑143 (MQ=255)
                                                                                                                 aTGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgctt                                                                                                                      >  1:338725‑M1/1‑138 (MQ=255)
                                                                                                                      accgccgGAACAACCAGTAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGAGTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGGGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggtttccgtgcacccctcattgaataaatcgggaattactgcgcttcgccg                                                                                                                 <  2:217207‑M1/248‑119 (MQ=255)
                                                                                                                          ccGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttt                                                                                                             >  1:571438‑M1/1‑129 (MQ=255)
                                                                                                                                 aacCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAAGTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataaaaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgtttcgccgtttttcatttc                                                                                                      <  2:649078‑M1/251‑130 (MQ=255)
                                                                                                                                  acCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaattagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcg                                                                                                     <  2:524145‑M1/251‑131 (MQ=255)
                                                                                                                                     aGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgccc                                                                                                  <  1:765431‑M1/251‑134 (MQ=255)
                                                                                                                                        aaaCGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccat                                                                                                >  1:453092‑M1/1‑115 (MQ=255)
                                                                                                                                                   gtgtTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctt                                                                                    >  1:742491‑M1/1‑104 (MQ=255)
                                                                                                                                                   gtgtTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagct                                                                                     <  1:644023‑M1/250‑147 (MQ=255)
                                                                                                                                                     gtTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGCGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaccgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttt                                                                                  >  2:191811‑M1/1‑102 (MQ=255)
                                                                                                                                                      ttCTGAAATCCAGGCTATCGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagatacgaatcaatgagcaatgagggttgccgggcaaccctaattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatatctttcagcttttt                                                                                 >  2:640600‑M1/1‑101 (MQ=255)
                                                                                                                                                           aaaTCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttgg                                                                               >  2:744002‑M1/1‑96 (MQ=255)
                                                                                                                                                                    cTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgctt                                                                                                                      >  1:448679‑M1/1‑87 (MQ=255)
                                                                                                                                                                    cTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgctt                                                                                                                      <  2:448679‑M1/200‑114 (MQ=255)
                                                                                                                                                                               aCGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcacttcgcccatagctttcagctttttggagatatcgcggcgttctttggag                                                        <  1:411388‑M1/251‑176 (MQ=255)
                                                                                                                                                                                   cAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagc                                                     <  1:552308‑M1/250‑179 (MQ=255)
                                                                                                                                                                                           gATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcattt                                            >  2:55840‑M1/1‑64 (MQ=255)
                                                                                                                                                                                             tCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcattttt                                          >  1:549495‑M1/1‑62 (MQ=255)
                                                                                                                                                                                              cTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttg                                         >  2:83692‑M1/1‑61 (MQ=255)
                                                                                                                                                                                               tGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttt                                                                                                             >  2:749405‑M1/1‑60 (MQ=255)
                                                                                                                                                                                               tGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttt                                                                                                             <  1:749405‑M1/182‑123 (MQ=255)
                                                                                                                                                                                                gcgcTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcattttt                                          <  2:742491‑M1/248‑190 (MQ=255)
                                                                                                                                                                                                 cgcTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcaactttttggagatatcgcggcgttctttggagagctcggcatttttgatg                                      <  1:431261‑M1/251‑194 (MQ=255)
                                                                                                                                                                                                           gAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgt                            >  2:497175‑M1/1‑48 (MQ=255)
                                                                                                                                                                                                            aaCTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtc                           >  1:20614‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                                tGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttagccgtttttcatttcgcccataactttcagctttttggagatatcgcggcgttctttggtgagctcggcatttttgatgatgtaatcgtcaccg                       >  2:738409‑M1/1‑43 (MQ=255)
                                                                                                                                                                                                                  gtaaacaACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgc                      <  1:459011‑M1/248‑210 (MQ=255)
                                                                                                                                                                                                                        aacGTAAGAGAATTATCCTGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaactgtaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagagatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttc               <  2:671591‑M1/251‑217 (MQ=255)
                                                                                                                                                                                                                           gTAATAGAATTAGCCGGAATGGTGGCGACTANaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcata            <  2:374996‑M1/251‑220 (MQ=255)
                                                                                                                                                                                                                             aaTAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagt          <  1:217030‑M1/251‑222 (MQ=255)
                                                                                                                                                                                                                                aGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcac       >  1:128796‑M1/1‑27 (MQ=255)
                                                                                                                                                                                                                                   aTTATCCGGAATGGTGGCGTCTATaatttcgattgtgtcacggatgaggatgatggcggtgatacacagataagaatcaatgagcaatgagggttgccgggctaccctcattaaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctt    <  2:100835‑M1/251‑228 (MQ=255)
                                                                                                                                                                                                                                      aTCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgtgaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctgtc  <  2:592782‑M1/250‑230 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                     
CGAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATGCACTAGGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGT  >  NC_000913/2065901‑2066380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: