Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 867,553 Δ15,836 bp [gsiA][ybjG] [gsiA], gsiB, gsiC, gsiD, pdeI, dgcI, rimO, bssR, yliI, gstB, dacC, deoR, [ybjG]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 867553 883388 15836 67 [0] [1] 66 [gsiA]–[ybjG] [gsiA],gsiB,gsiC,gsiD,pdeI,dgcI,rimO,bssR,yliI,gstB,dacC,deoR,[ybjG]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 8675520 (0.000)65 (0.670) 58/488 0.3 100% coding (33/1872 nt) gsiA glutathione ABC transporter ATP binding subunit GsiA
?NC_000913 883389 = 0 (0.000)intergenic (‑1/‑284) ybjG/mdfA undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter

CGCCGCGTTAATGGATTACGGCGGATTAAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAATCTGAATATTGCCTTTATGCAGGACCAGCAGAAAATAGCTGCGGTCCGCAATCTCTCTTTTAGTCTGCAACGCGGTGAGACGCTGGCAATTGTTGGCGAATCCGGCTCCGGTAAGTCAGTGACTGCGTTGGCATTGATGCGCCTGTTGGAACAGGCGGGCGGTTTAGTACAGTGCGATAAAATGCTGTTGCAGCGGCGCAGTCGCGAAGTGATTGAACTTAGCGAGCAG  >  NC_000913/867302‑867798
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      
cgccgcGTTAATGGATTACGGCGGATTAAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAAt                                                                                                                                                                                                                                                        <  1:206023/251‑1 (MQ=255)
  ccgcGTTAATGGATTACGGCGGATTAAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAAGCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaa                                                                                                                                                                                                                                                      <  2:177163‑M1/251‑3 (MQ=255)
    gcgTTAATGGATTACGGCTGATTAAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaact                                                                                                                                                                                                                                                    <  2:670944‑M1/251‑5 (MQ=255)
         aaTGGATTACGGCGGATTAAGACACGCGGAAGCCTGCGAGCGGGTATTAATGGAAAAACTCCCTGCGCTTGGCGGTTGCGGTGGCTTAATCGCGACCGACCATGAAGGGAATGTAGCGTTACCGTGTAACACCGAAGGATTGTATCGCGTCTGGGGCTACGCAGGCCATACGCCACCCACCGGTATCTACCGTGAAAAAGGGGACACTGTTGCCACACAGTGATGAACTTGATGCCCGTAAtaacttccc                                                                                                                                                                                                                                                <  2:517335/250‑9 (MQ=255)
                 gctgcggattAAGTTTCGCGGAAGCCTGCGGGCGGGTTGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGGCGCGCTTCCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCTCCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaag                                                                                                                                                                                                                                       <  2:428584‑M1/248‑18 (MQ=255)
                  cggcggATTAAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagt                                                                                                                                                                                                                                      <  1:753199‑M1/251‑19 (MQ=255)
                       gagtaagTCTCGGGGAGGCGTGCGAGCGGGTAGTAAGGGAAAAACTCCCGGCGCTGGGCGGTAGCGGTGGCTTAATCGCTATCGACCAGGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgat                                                                                                                                                                                                                                   <  2:146887‑M1/246‑22 (MQ=255)
                                    ggAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaat                                                                                                                                                                                                                    >  1:675794‑M1/1‑215 (MQ=255)
                                      aaGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatac                                                                                                                                                                                                                  <  1:452207‑M1/251‑39 (MQ=255)
                                      aaGCCTGCGAGCGGGAAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgccgcaaagtgattaaaagggagccaatac                                                                                                                                                                                                                  >  1:579573‑M1/1‑213 (MQ=255)
                                        gCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacag                                                                                                                                                                                                                <  1:230918‑M1/251‑41 (MQ=255)
                                               ggcGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAAGCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtc                                                                                                                                                                                                         <  2:254609‑M1/250‑48 (MQ=255)
                                                  gggaagaaagggaaaaactcccTGCGCTTGGNGGTAGCGGTGGCTTAATCGCTAACGACCATGAAGGGAATGTCGCGCTACCGTTTACCCCCGAAGGAATGTATCGCGCCTGGGGCGACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagggattaaaagggagccaatacaggcaagtcgtt                                                                                                                                                                                                      <  2:377812‑M1/241‑51 (MQ=255)
                                                  gggTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTCTCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcacagtgattaaaagggagccaatacaggcaagtcgtt                                                                                                                                                                                                      >  1:342100‑M1/1‑201 (MQ=255)
                                                  gggTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGACGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgtt                                                                                                                                                                                                      >  1:398031‑M1/1‑201 (MQ=255)
                                                  gggTAGGAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGGTACCGTTTAACACCGAAGGAATGTATCGCGCTTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAGGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacagtcaagtcgtt                                                                                                                                                                                                      <  1:52644‑M1/251‑51 (MQ=255)
                                                    gtagtaATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacag                                                                                                                                                                                                                <  2:705048‑M1/239‑41 (MQ=255)
                                                    gtagtaATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacag                                                                                                                                                                                                                >  1:705048‑M1/1‑199 (MQ=255)
                                                    gtagtaATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagagattaaaagggagccaatacaggcaagtcgttg                                                                                                                                                                                                     >  1:302116‑M1/1‑199 (MQ=255)
                                                         aaTGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaaggg                                                                                                                                                                                                                           >  1:94738‑M1/1‑194 (MQ=255)
                                                           gggaAAAACTCCCTGCGCTGGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACCCCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaa                                                                                                                                                                                             <  2:284793‑M1/250‑60 (MQ=255)
                                                              aaaaaCTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtg                                                                                                                                                                                          >  1:172570‑M1/1‑189 (MQ=255)
                                                                    cccctGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggtt                                                                                                                                                                                    <  1:633815‑M1/250‑69 (MQ=255)
                                                                               ggCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaa                                                                                                                                                                         <  2:191758‑M1/251‑80 (MQ=255)
                                                                                   gTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcg                                                                                                                                                                     >  1:566994‑M1/1‑168 (MQ=255)
                                                                                     aGCGGTGGCTTAATAGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgggaataaagtgcaggttaaactgggtaaagcggc                                                                                                                                                                   >  2:598922‑M1/1‑166 (MQ=255)
                                                                                          tGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagcataaagtgcaggttaaactgggtaaagcggcatcgt                                                                                                                                                              >  2:304954‑M1/1‑161 (MQ=255)
                                                                                          gggcTTAATCGATATCGTCCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagggcaggttaaactgggtaaagcggcatcgg                                                                                                                                                              <  2:424221‑M1/250‑91 (MQ=255)
                                                                                            gattcaacgctatagACCATGAAGGGAATGACGCGCTACCGTGTAACACCGCAGGAATGTATCGAGCCTGGGGCTACGCAGGCGATACGGCAACCCCCGGTATCTACCGTGAAAAAGGGGACACCGTTGGCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgataaaaaaggagccaatacaggcaagtagttgagactaaagtgaaggttaaagttggtaaataggcatcgtct                                                                                                                                                            >  2:744144‑M1/8‑159 (MQ=255)
                                                                                                 aTCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttattt                                                                                                                                                       >  1:263271‑M1/1‑154 (MQ=255)
                                                                                                       agcgaccagtagggtaatgtcgcgctaccgttGAACACCGAAGGAATGTATCGCTCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctca                                                                                                                                                 <  2:705182‑M1/236‑104 (MQ=255)
                                                                                                       agcgaCCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctc                                                                                                                                                  <  1:560897‑M1/248‑103 (MQ=255)
                                                                                                       aTCGACCATGAAGGGAAGGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACGCCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccct                                                                                                                                                   <  2:514342‑M1/249‑102 (MQ=255)
                                                                                                        tCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctaa                                                                                                                                                 >  2:6406‑M1/1‑147 (MQ=255)
                                                                                                         cGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCATCCACCGGTATCTTCCGTGAAAAAGGGGACTCCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaag                                                                                                                                               <  1:435540‑M1/251‑106 (MQ=255)
                                                                                                          gACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagc                                                                                                                                              <  1:358773‑M1/251‑107 (MQ=255)
                                                                                                                   gggAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgttt                                                                                                                                     <  1:198202‑M1/251‑116 (MQ=255)
                                                                                                                        gggcgcgctaCCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCCCCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcagcgtcttatttccctcaagcggcctgtttacggt                                                                                                                                <  2:702985‑M1/248‑121 (MQ=255)
                                                                                                                                 aCCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattg                                                                                                                       >  1:739597‑M1/1‑122 (MQ=255)
                                                                                                                                 aCCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattg                                                                                                                       <  2:302116‑M1/251‑130 (MQ=255)
                                                                                                                                       tAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacg                                                                                                                  <  1:598922‑M1/250‑135 (MQ=255)
                                                                                                                                          cacCGAAGGAATGTAGCGCGCCTGGGGCTACGCCGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagggattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaaggngcctgtttacggagggtgattgtaacgggc                                                                                                               >  2:336312‑M1/1‑113 (MQ=255)
                                                                                                                                                   aaTGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggcgccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaa                                                                                                     <  1:31052‑M1/251‑148 (MQ=255)
                                                                                                                                                     tGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaat                                                                                                    >  1:548872‑M1/1‑102 (MQ=255)
                                                                                                                                                      ggatcGCGCCTGGGGATACGCAGGCGATACGCCACCCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttattgccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataa                                                                                                  <  2:718907‑M1/249‑151 (MQ=255)
                                                                                                                                                           ccgccTGGGGCGACGCAGGCGATACGCCATCCACCGGTATCTACCGCGAAAAAGGGGACACCTTTGCCACACAGTGATGAACTTGATGCCGGTAATaacctcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaactt                                                                                             <  1:611630‑M1/250‑156 (MQ=255)
                                                                                                                                                                   ggCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaag                                                                                     <  1:336312‑M1/251‑164 (MQ=255)
                                                                                                                                                                    gCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTGGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggttggtgattgtaacgggcataggttaaataaaacttaaagaaagc                                                                                    <  1:669910‑M1/251‑165 (MQ=255)
                                                                                                                                                                       aCGCAGGCGATACGCCACCCACCGGTATCGACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaattcaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgagtgtaacgggcataggttaaataaaacttaaagaaagcg                                                                                   <  2:595946‑M1/249‑166 (MQ=255)
                                                                                                                                                                                     ccAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaat                                                                   <  1:474934‑M1/251‑182 (MQ=255)
                                                                                                                                                                                      cAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagagattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcatcggttaaataaaacttaaagaaagcgtagctatactcttaat                                                                   >  2:77943‑M1/1‑69 (MQ=255)
                                                                                                                                                                                       aaCCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataa                                                                 <  2:491443‑M1/251‑184 (MQ=255)
                                                                                                                                                                                              ggTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctc                                                                                                                                                  <  2:413568‑M1/163‑103 (MQ=255)
                                                                                                                                                                                              ggTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctc                                                                                                                                                  >  1:413568‑M1/1‑61 (MQ=255)
                                                                                                                                                                                                  tCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataatgtaagaatgt                                                      >  2:447669‑M1/1‑57 (MQ=255)
                                                                                                                                                                                                        gTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataatgtaagaatgtgctta                                                 >  1:177333‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                             aaaGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataatgtaagaatgtgcttaaccgtg                                           <  1:304954‑M1/251‑206 (MQ=255)
                                                                                                                                                                                                                 gggACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataatgtaagaatgtgcttaaccgtggttt                                       <  1:678792‑M1/251‑210 (MQ=255)
                                                                                                                                                                                                                  ggACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataatgtaagaatgtgcttaaccgtggtttc                                      <  2:172570‑M1/251‑211 (MQ=255)
                                                                                                                                                                                                                      acCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaa                                                                                                >  1:79277‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                                      acCGTTGCCACACAGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaaggcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaa                                                                                                <  2:79277‑M1/189‑153 (MQ=255)
                                                                                                                                                                                                                                cacaGTGATGAACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcg                        <  1:313867‑M1/251‑225 (MQ=255)
                                                                                                                                                                                                                                         gaACTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtatctatactcgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgt               <  1:694339‑M1/251‑234 (MQ=255)
                                                                                                                                                                                                                                          aaCTTGATGCCGGTAATaacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgtt              >  1:346418‑M1/1‑17 (MQ=255)
                                                                                                                                                                                                                                          aaCTTGATGCCGGTAATaacgtcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgtt              <  2:68259‑M1/251‑235 (MQ=255)
                                                                                                                                                                                                                                                      gTAATaactgcccgacgcaaagtgattaaaagggagccaataaaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcatgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataaggtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttatctgcgctttt  <  2:579573‑M1/251‑247 (MQ=255)
                                                                                                                                                                                                                                                       taataacttcccgacgcaaagtgattaaaagggagccaatacaggcaagtcgttgagaataaagtgcaggttaaactgggtaaagcggcatcgtcttatttccctcaagcggcctgtttacggtgggtgattgtaacgggcataggttaaataaaacttaaagaaagcgtagctatactcgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgctttt  >  1:622050‑M1/1‑4 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      
CGCCGCGTTAATGGATTACGGCGGATTAAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAATCTGAATATTGCCTTTATGCAGGACCAGCAGAAAATAGCTGCGGTCCGCAATCTCTCTTTTAGTCTGCAACGCGGTGAGACGCTGGCAATTGTTGGCGAATCCGGCTCCGGTAAGTCAGTGACTGCGTTGGCATTGATGCGCCTGTTGGAACAGGCGGGCGGTTTAGTACAGTGCGATAAAATGCTGTTGCAGCGGCGCAGTCGCGAAGTGATTGAACTTAGCGAGCAG  >  NC_000913/867302‑867798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: