| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,299,522 | Δ12,535 bp | mdtP–alsB | mdtP, mdtO, mdtN, ytcA, yjcS, alsK, alsE, alsC, alsA, alsB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4299522 | 4312056 | 12535 | 62 [0] | [0] 62 | mdtP–alsB | mdtP,mdtO,mdtN,ytcA,yjcS,alsK,alsE,alsC,alsA,alsB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4299521 | 0 (0.000) | 62 (0.630) | 56/492 | 0.3 | 100% | intergenic (‑155/+43) | fdhF/mdtP | formate dehydrogenase H/putative multidrug efflux pump outer membrane channel |
| ? | NC_000913 | 4312057 = | 0 (0.000) | intergenic (‑15/+44) | alsB/alsR | D‑allose ABC transporter periplasmic binding protein/DNA‑binding transcriptional repressor AlsR | |||||
CGCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTTCTCGACGACGGGACCTGCCTGATACCCGCCGCCCAGCGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTG > NC_000913/4299280‑4299768 | cGCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaagggg < 1:248852‑M1/251‑10 (MQ=255) gCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaagggg > 2:192117‑M1/1‑241 (MQ=255) tttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactcc < 1:553833‑M1/250‑21 (MQ=255) ttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgc > 1:401291‑M1/1‑229 (MQ=255) gCCGTTAACGACGACCAGGTTGATTTTGCAACCGGATGCGCAATAGGGGCTAACCGTGACGCCTTTTTTCATCGTTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTTATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcga < 2:408177‑M1/251‑25 (MQ=255) agcgacgaccAGGTTGATTTTGCAACCTGATGCGCAATAGGGTCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCTTACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcg < 2:555418‑M1/248‑30 (MQ=255) tCGACGACCAGGTTGCTTTTGCAACCTGATGCGCAATAGGGGCAAACCGAGACGACTTTTTTCATCGGTCTCGCTCAAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATTAATCTTTTATGCCACATTTTATGTGGAGTCCTTCCCTGATATTACGGGCACTATTTATTCAACACTCTGCCGAAAAACAGGCTGT‑CGTCAGATTTGACGTGAtgtaaggggccagtaactccgcgagggcgg > 2:274037‑M1/1‑220 (MQ=255) ccAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaat > 1:72499‑M1/1‑213 (MQ=255) ccAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGGTTTGACGTGAggtaaggggacagtaactccgcgatggcggaat < 2:72499‑M1/246‑34 (MQ=255) ggTTGATTTTGCAACCTGATGCGCAATAGGGNCCAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACTTTTTATGTGGGGTCAGTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaagggtacagtaactccgcgatggcggaattacctttg < 2:375642‑M1/251‑42 (MQ=255) gATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttct < 1:6144‑M1/250‑45 (MQ=255) gATTGTGCAACCGGATGGGGAATAGGGGCCAACCGTGACGGCTTTTGTCATCGGTCTCGCTCCAGTGAATCAAATCGCGCATACGCGCTCTCGACTACAGTATGCATCTGTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTTACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttctt < 2:495102‑M1/251‑46 (MQ=255) aaCCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagc < 2:69597‑M1/251‑54 (MQ=255) ccTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgc > 1:275410‑M1/1‑196 (MQ=255) gATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcg < 1:721959‑M1/249‑57 (MQ=255) agtgcaatAGGGGCAACCCGTGACTACTTTTTTAATCGGTCTCGTTCCAGTTAATCAAATTACGCCTTCGCGCTCTCGGCTACAGTAAGCATCTTTGATGCCACATTTTATGTGGGGTCATTCCCTTAGATTTCGGGCACTATTTATTCAAAACTCTGACAAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctg < 2:559303‑M1/248‑61 (MQ=255) aaTAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtg > 1:172180‑M1/1‑186 (MQ=255) aCCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaac < 1:492299‑M1/251‑77 (MQ=255) gacgacTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaatt < 2:172180‑M1/250‑81 (MQ=255) acgtcttttTTCATCTGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTTCGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttctgatttcagcgcgcctggtgagaagaaagcaacaattgc < 1:558094‑M1/247‑83 (MQ=255) acTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgcc < 1:206897‑M1/251‑86 (MQ=255) ttCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttt < 1:81066‑M1/250‑91 (MQ=255) ttCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttt < 1:228940‑M1/250‑91 (MQ=255) gtcacgctcCAGTTAATCAAATCACGCATACGCGTTCTCGACTACAGTATGCATCTTTTATGCCCCATTTTATGTGGGGTCATTCCCTGATATTACGGGCGCTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccata < 1:71168‑M1/247‑99 (MQ=255) gCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatcttaat > 2:127371‑M1/1‑148 (MQ=255) gCTCAAGTTAATCCAATCACGCATACGCGCTNTCGAATACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGTCACTATTTATTCAAAACTCTGACGAAAAACAGGCGGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgagatggcggaattacctttttcttatttcagcgcgtctggtgagaagaaatcaacaattgcgcctgttttttccatattaag < 2:334313‑M1/251‑104 (MQ=255) tCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatat > 1:63542‑M1/1‑146 (MQ=255) aatcaaatcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttg < 1:192117‑M1/251‑113 (MQ=255) atcaaatcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagctttt > 2:616287‑M1/1‑138 (MQ=255) caCGCATACTCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgtctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatg < 1:584872‑M1/250‑120 (MQ=255) cgcTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggc < 1:673259‑M1/251‑131 (MQ=255) ctctCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcg > 1:537480‑M1/1‑119 (MQ=255) cGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgac < 1:338004‑M1/248‑134 (MQ=255) aCTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagaga < 2:63542‑M1/251‑139 (MQ=255) cTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttaagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtcc > 2:649433‑M1/1‑99 (MQ=255) tttATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagaaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaaacgtcc > 1:679141‑M1/1‑97 (MQ=255) gCCACATTTTATGGGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaagg < 2:401291‑M1/251‑160 (MQ=255) caTTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgcc < 2:164706‑M1/173‑86 (MQ=255) caTTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgcc > 1:164706‑M1/1‑88 (MQ=255) aTGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgta > 1:111717‑M1/1‑82 (MQ=255) gTCATTCCCTGATATTACGGGCGCTAGTTATGCAAAACGCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagatacaaaaaaagcgtccagcaaggttggttgtaatattctt < 1:674617‑M1/251‑177 (MQ=255) gTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagacgaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgaaatattctt > 1:94349‑M1/1‑75 (MQ=255) cATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgc < 1:127371‑M1/251‑179 (MQ=255) gATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggc < 1:463771‑M1/249‑185 (MQ=255) gATATTACGGGAACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGGGAggtaaggggacagtaactccgcgatggcggcattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgatgagctgggcgacagcgacaaaaaaagcgaccagaaaggttggttgtaatattcttgacgaggcat > 2:692325‑M1/1‑65 (MQ=255) atatTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGG‑CGTCAGTTGTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttagttcagcgcgcctggtgagaagaaatcaacaattgcgcctgttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcatt < 2:719827‑M1/251‑188 (MQ=255) ttACGGGCACTATTTATTCAAAACTCTGCCGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacg > 2:38813‑M1/1‑61 (MQ=255) aCGGGCACTATTTATTCAAAACTCTGACGAAAACCAGGCTGT‑CGTCAGTTTTGACGTGAggtcaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgac > 2:202942‑M1/1‑59 (MQ=255) aCGGGCACTATTTATTCAAAACGCTGACGAANAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgac < 2:362681‑M1/251‑193 (MQ=255) ggCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgaccta < 1:52904‑M1/251‑196 (MQ=255) gCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgaccta > 1:24883‑M1/1‑55 (MQ=255) gCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggcaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgaccagcaaggttggttgtaatattcttgccgaggcattacgcccta > 2:525189‑M1/1‑55 (MQ=255) cattatttattaaaAACTCTGACGAAAAACAAGC‑GTGCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatgtcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggtattacgacctaat < 2:729112‑M1/248‑198 (MQ=255) cTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAgggaaggggacagtaactccgcgatggcggaattacctttttattatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgcggcattacgacctaata > 2:558353‑M1/1‑52 (MQ=255) aaCTCTGACGAAAAACAGGCTGT‑CGTAAGATTTGACGTGAggaaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggagagaagaactcaacaattccgccggttttttacatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataaaggcgtttccgg > 1:233329‑M1/1‑40 (MQ=255) gACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggc < 1:292012‑M1/248‑215 (MQ=255) agaAAAACAGGCTGT‑CGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtg < 1:291977‑M1/250‑220 (MQ=255) aGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagagcgcctggtgagaagaaatcaacaattgagccggttttttccatattaatattagcttgttcaatgttgagctgggcgacacagacaaacaaagcgtccagccaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgataggc > 1:442184‑M1/1‑13 (MQ=255) ttGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggccagt > 1:539105‑M1/1‑9 (MQ=255) aCGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggccagtttc < 1:4869‑M1/251‑246 (MQ=255) aCGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggccagtttc > 2:4869‑M1/1‑6 (MQ=255) gTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggccagtttcgc > 1:7793‑M1/1‑4 (MQ=255) | CGCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGT‑CGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTTCTCGACGACGGGACCTGCCTGATACCCGCCGCCCAGCGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTG > NC_000913/4299280‑4299768 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |