Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,601,202 Δ13,582 bp [hyfA]focB [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2601202 2614783 13582 59 [0] [0] 59 [hyfA]–focB [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 26012010 (0.000)59 (0.610) 54/490 0.3 100% coding (1/618 nt) hyfA hydrogenase 4 component A
?NC_000913 2614784 = 0 (0.000)intergenic (+2/+36) focB/yfgO formate channel FocB/putative transporter YfgO

CCATTCCGTGCTGGCTGCGCTTGCGGCCAGCATACCTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAGGAAGCCCCTTGCCTGCAGGTCTGCCCGGTCAATGCCATCTCTCAGAGGGATGATGCGATCCAACTCAACGAAAGCCTCTGTAT  >  NC_000913/2600959‑2601448
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                       
ccATTCCGTGCTGGCTGCGCTTGCGGCCAGCATACCTCCCTTCTAGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagc                                                                                                                                                                                                                                                 >  2:221852‑M1/1‑243 (MQ=255)
     ccGTGCTGGCTGCGCTTGCGGCCAGCATACCTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggc                                                                                                                                                                                                                                            >  1:289991‑M1/1‑238 (MQ=255)
             gctgCGCTTGCGGCCAGCATGCCTCACTTCTCGTGATCAAGATCTCATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGTAGCCGACAaaatcagcccggcgaaacagt                                                                                                                                                                                                                                    <  2:92456‑M1/251‑22 (MQ=255)
                gcgcTTGCGGCCAGCATACCTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagtt                                                                                                                                                                                                                                   <  2:2260‑M1/249‑23 (MQ=255)
                     tGCGGCCAGCATACCTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcg                                                                                                                                                                                                                              <  1:268991‑M1/249‑28 (MQ=255)
                      gCGGCCAGCATACCTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcggg                                                                                                                                                                                                                            <  1:692150‑M1/250‑30 (MQ=255)
                        ggCCAGCATACCTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctg                                                                                                                                                                                                                         <  1:632754‑M1/251‑33 (MQ=255)
                         gCCAGCATACCTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctg                                                                                                                                                                                                                         >  1:526697‑M1/1‑218 (MQ=255)
                               aTACCTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagatt                                                                                                                                                                                                                   >  2:4068‑M1/1‑212 (MQ=255)
                                  ccTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattc                                                                                                                                                                                                               >  1:181450‑M1/1‑209 (MQ=255)
                                    ccaCTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattctt                                                                                                                                                                                                             <  1:575901‑M1/250‑45 (MQ=255)
                                      cctTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgc                                                                                                                                                                                                           <  2:255353‑M1/250‑47 (MQ=255)
                                       cTTCTCGTGATCAAGATCACATTCTAGCTTTCCCCTGCGACACGGGTGTCGCATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcggactgaagattattcttgcg                                                                                                                                                                                                          >  2:585855‑M1/1‑204 (MQ=255)
                                            cGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcg                                                                                                                                                                                                        <  2:518280‑M1/248‑50 (MQ=255)
                                              tGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttg                                                                                                                                                                                                   >  2:184247‑M1/1‑197 (MQ=255)
                                              tGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttg                                                                                                                                                                                                   >  2:504452‑M1/1‑197 (MQ=255)
                                               gATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc                                                                                                                                                                                                  >  2:19088‑M1/1‑196 (MQ=255)
                                                    aGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCCTCATTTTTGTACCGTTCCGAATCCAGTTAATACATAACTTATTGAATCTATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGCGCCGACAaaatcagcccggcgaaacagctcgtcgggctgcagattattcttgcgcgatttgcccatc                                                                                                                                                                                             >  2:491553‑M1/1‑191 (MQ=255)
                                                      aTCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgg                                                                                                                                                                                           <  1:19088‑M1/251‑63 (MQ=255)
                                                           aTTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccag                                                                                                                                                                                      <  1:4068‑M1/251‑68 (MQ=255)
                                                                           gCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggct                                                                                                                                                                       <  1:506547‑M1/250‑83 (MQ=255)
                                                                            cGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggcttt                                                                                                                                                                     <  1:481003‑M1/251‑85 (MQ=255)
                                                                              acacGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttga                                                                                                                                                                   <  1:184247‑M1/251‑87 (MQ=255)
                                                                              acacGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttga                                                                                                                                                                   <  1:504452‑M1/251‑87 (MQ=255)
                                                                                     tgtCGAATCAATTTTTTGCTGAACGTTAATGACCCTAATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAAAATATTGAGTTAATCAGAATGGAATCCTTTATGAAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgccaagcgggcaaggcatgaatcacggatttgatcagcgc                                                                                                                                                            >  2:509279‑M1/1‑158 (MQ=255)
                                                                                      gtCGAATCCATTTTTTGCTGAACGTTAATGACCAGCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgt                                                                                                                                                            <  2:581445‑M1/250‑94 (MQ=255)
                                                                                           aTCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgcca                                                                                                                                                       >  1:204834‑M1/1‑152 (MQ=255)
                                                                                               aTTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacgg                                                                                                                                                   >  1:330471‑M1/1‑148 (MQ=255)
                                                                                                         gAACGGTAATGACCATCAGTTTTGTACCGTTCAGAATCCAGTTAATACATAACGTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATAGGAAAGGCAATGTTTCATATCAGTGTCAAGGAGCCGACTaaaccagcccggcgaaacagttcgtcggtctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctgtgatcagcgtcgccaacggaatgtcgaa                                                                                                                                          <  2:115295‑M1/249‑112 (MQ=255)
                                                                                                          aaCGGTAATGATCATCATTTTTGTACCGTTGAGAATACAGTTAATACATTACTTATTGAATATATTGAGTTAAGCAGAAGGGCATCCTGTATGCAATATGAAATGCAATGTTTCAGATCATTTTCAAGGAGGTGACAaaatcagcccggcgaaacagttcgtcgggcggaagatttttcttgcgcgatttggccatcgggccaggcaggaatcacggcattgaccagcgtcgccatcggaatggcgaagaa                                                                                                                                       <  2:561620‑M1/251‑115 (MQ=255)
                                                                                                                   gACCATCATTTTTGTACCGTTAAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatgtcgaagaatacgcccc                                                                                                                               <  2:568201‑M1/250‑123 (MQ=255)
                                                                                                                         catTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatcc                                                                                                                        <  1:533331‑M1/251‑130 (MQ=255)
                                                                                                                              ttGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccac                                                                                                                    >  1:368259‑M1/1‑117 (MQ=255)
                                                                                                                                gTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaa                                                                                                                 <  1:607624‑M1/251‑137 (MQ=255)
                                                                                                                                        cAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccga                                                                                                          <  2:544030‑M1/250‑144 (MQ=255)
                                                                                                                                         aGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGCGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattcttcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgcagaatacgccccagaatccccacaaaccaccga                                                                                                          >  2:413684‑M1/1‑106 (MQ=255)
                                                                                                                                                           aaCTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaata                                                                                      <  1:622136‑M1/251‑164 (MQ=255)
                                                                                                                                                                aTTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaacaccgataaaataatcac                                                                                 >  1:87166‑M1/1‑83 (MQ=255)
                                                                                                                                                                       atatTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgcagatcaccaccgataaaaaaatcaccagagg                                                                           >  2:285652‑M1/1‑76 (MQ=255)
                                                                                                                                                                                     aGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgc                                                            >  1:504750‑M1/1‑62 (MQ=255)
                                                                                                                                                                                     aGAATGGCATCCTTTATGCAATACGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgc                                                            >  1:706695‑M1/1‑62 (MQ=255)
                                                                                                                                                                                              ttctttaatcaatattaaaGGCAATGTTTCNTATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggcgttgatcagcgtcgccaacggaatggcgaagaatacgttcttgaatcaccccgcgccccccaagatctacaccgataaaataatcaccagcggatgcaggttaaccgcttcggaga                                                    <  2:390238‑M1/241‑198 (MQ=255)
                                                                                                                                                                                                cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGCGCCGACAaaatcagcccgacgaaacagttcgtcgggctgaagattattcttgcacgatttgcccctcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagcatacgcccccgaatccccacaaaccaccgaagatcaccacagctaaaataatcaccagcggatgcaggttcaccccttcggcacac                                                  >  2:532301‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                cTTTATGCAATATGAAATGAAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggaagcaggttaaccgcttcggagaac                                                  >  2:620861‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                  ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaaca                                                 <  1:595998‑M1/249‑201 (MQ=255)
                                                                                                                                                                                                   tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaacaac                                               <  1:221852‑M1/250‑203 (MQ=255)
                                                                                                                                                                                                      gCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaacaacaccg                                           >  1:165073‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                              aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccgccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaacaacaccggccctaac                                   >  2:224471‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                                aTGCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttagtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaacccccgaagatcaccaccgattaaataatcaccagcgaatgcaggttaaccgctccggcgaaaaaacccggcactacccg                                 >  2:703931‑M1/1‑35 (MQ=255)
                                                                                                                                                                                                                  gCAATGTTTCATATCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaacaacaccggcactaacagg                                <  1:550311‑M1/250‑218 (MQ=255)
                                                                                                                                                                                                                           cATATCATTTTCAAGGAGCCGAAAaaaacagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccaccgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaacccaccgaagaccaccaccgataaaataatcaccagcggaggcaggttaaccgcttcggagaacaacaccggcactaacaggttgccgtcc                       <  2:204834‑M1/250‑227 (MQ=255)
                                                                                                                                                                                                                            atatCATTTTCAAGGAGCCGACAaaaccagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaacaacaccggcactaacaggttgccgtccag                     <  2:330471‑M1/251‑229 (MQ=255)
                                                                                                                                                                                                                              atCATTTTCAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaacaacaccggcactaacaggttgccgtccagcg                   >  1:405177‑M1/1‑21 (MQ=255)
                                                                                                                                                                                                                                     tCAAGGAGCCGACAaaatcagcccggcgaaccagttcgtcgggctgaagattattcttgcgcgatttgcacatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccatcggatgcaggttaaccgcttcggagaacaacaccngcactaacaggttgccgtccagcgcctgaa             >  2:393050‑M1/1‑14 (MQ=255)
                                                                                                                                                                                                                                      cAAGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaacaacaccggcactaacaggttgccgtccagcgcctgaat            >  1:464256‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                       aaGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaacaacaccggcactaacagggtgccgtccagcgcctgaata           >  2:164547‑M1/1‑12 (MQ=255)
                                                                                                                                                                                                                                       aaGGAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaaaaacaccggcactaacaggttgccgtccagcgcctgaata           >  2:763042‑M1/1‑12 (MQ=255)
                                                                                                                                                                                                                                         ggAGCCGACAaaatcagcccggcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcgggccaggcatgaatcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagactccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttacccgcttcggagaacaacaccggcactaacaggttgccgtccagcgcctgaataatc        >  1:705364‑M1/1‑10 (MQ=255)
                                                                                                                                                                                                                                               gACAaaatcagcgcggcgaaacagttcgtcgggctgaagattcttcttgcgcgatttgcccatcgggccaggcatgaagcacggctttgatcagcgtcgccaacggaatggcgaagaatacgccccagaatccccacaaaccaccgaagatcaccaccgataaaataatcaccagcggatgcaggttaaccgcttcggagaacaacaccggcactaacaggttgccgtccagcgcctgaataatcagatac  <  2:238017‑M1/251‑248 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                       
CCATTCCGTGCTGGCTGCGCTTGCGGCCAGCATACCTCACTTCTCGTGATCAAGATCACATTCTCGCTTTCCCCTGCGACACGGGTGTCGAATCCATTTTTTGCTGAACGTTAATGACCATCATTTTTGTACCGTTCAGAATCCAGTTAATACATAACTTATTGAATATATTGAGTTAATCAGAATGGCATCCTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAGGAAGCCCCTTGCCTGCAGGTCTGCCCGGTCAATGCCATCTCTCAGAGGGATGATGCGATCCAACTCAACGAAAGCCTCTGTAT  >  NC_000913/2600959‑2601448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.