| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,652,331 | 0 | T | C | 95.7% | 156.5 / NA | 46 | intergenic (+2346/+397) | ydfD/ynfP | lysis protein/protein YnfP |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (20/24); minor base A (2/0); total (22/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
TATGGTGTGTTTCTGTTTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACCCGGCATTTATAGCAAACCAGATGG > NC_000913/1652086‑1652568 | tATGGTGTGTTTCTGTTTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCag < 1:105548/250‑1 (MQ=255) aTGGTGTGTTTCTGTTTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCagag < 1:553493/251‑1 (MQ=255) ggTGTGTTTCTGTTTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCagagag < 1:36363/251‑1 (MQ=255) gtgtgtCTGTGTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATATGAAAAATGGAACAATGATGATCAGGAGAAATGTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGACAGCAATCGACGCTCTCCGGATTCAGATGACATTAACGAGA‑CTGATCAAAGAGCATATCATTGATGTTCACCTCTGAGAGTa < 2:497580/250‑1 (MQ=255) gTTTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGcagaa‑c < 1:580776/251‑1 (MQ=255) gTTTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGcag < 2:174841/248‑1 (MQ=255) gTTTAGACTGGAGTTCGCCCTGGAGAGTTGTGTGCACTTGGAGGGGAGGACATAGATCTGAAAAATGGATCAATGATGATCAGGAGAAATTTAGCAAAAGACCGTGTCACGGTACTAAAAACACAGGCAGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATAGCATTGATGTTCACCTCAGAGAGTATGGcagaa < 1:365565/250‑1 (MQ=255) aCTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGaaa < 1:278245/250‑1 (MQ=255) ggAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTC‑ATCTTATTAAGCCAGCAATCCACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTTATGTTCACCTCAGAGGGTATGGCAGAA‑CAGGAAAA‑c > 1:263431/1‑250 (MQ=255) ggTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCtt < 2:128894/251‑1 (MQ=255) gtgtgCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTc < 1:428921/251‑1 (MQ=255) tGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCCAACGGGGCAATC‑TTCTTATTAAGACAGAAATCGACGCCCTCCGGAGTCAGATGACATTTACGAGA‑CTGAGCAAAGAGCATATCATTGCTGTTTACCTCAAAGAGTATGGCAGAA‑CAGCAAAA‑CAAAAATATACATTT‑GTTTTTCAACCttaa > 2:201900/1‑247 (MQ=255) ggATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTC‑ATCTTTTTAAACCAGCAATCGGCGCTCTCCGGAGTCAGATGACATTAACGAAA‑ATGAGCACAAAGCATATCATTGATGTTCACCTCAGAGAGTATGGCTGAA‑AAGAAAAA‑AAAAAAAGGCCCTTT‑GTTTTTCAACCTGAAgt > 2:115058/1‑251 (MQ=255) tGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAAACAATCGGGGCATTC‑ATTTTATTAAGCCAGCAATCGACGCATTCCGGAGTAAGAAGAAATTAACGAGA‑CTGAGGAAAAAGCATAATATTGGTGTTCAACTCAGAGAGTATGGCAGAA‑GAGGAAAA‑AAAAAAAGGACCTTT‑TTTTTTTAAACTGGAGTGTc > 1:181145/1‑251 (MQ=255) taggaCATAGATCTGAAAACTGGAACAATGCTGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAAAAGGGTCATTC‑ATCTTATTAAACCAACAAACGACGCTCTACGGGGTCAGATGAAATTTACGGGA‑CTGAGCAAAAAGCATATTATTTTTTTTCACCTCAGTGAGGATGGCA‑AA‑CAAAAAAAACAACAATGCACCTTT‑GTTTTTTAACCTGaaaagtca > 2:332264/2‑243 (MQ=255) tCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTTATGTTCACCTCAGAGAGGATGGCAGAA‑AAGAAAAA‑AAAAAATGCACCTTT‑GTTTTTCAACCTGAAGAGTCCGCGAG‑AGGaaaa > 1:305916/1‑250 (MQ=255) gAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGaaa < 1:469893/189‑1 (MQ=255) gAACAATGATGAACAGGAGAAATTTAGCAAANGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACAGTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGAc < 2:277681/251‑1 (MQ=255) gAACAAAGATGAACAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCCCCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGCCAGCGAG‑AGTAAACAATTATGGTGAc < 2:314615/251‑1 (MQ=255) tgatCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGCAACCAATCGGGGCAATC‑ATCTTATTAAGGCAACAATCGACGCAATCCGGAGTCAGATGACATTAACGAGA‑CTGAGAAAAAAGCATATAATTTATGTTTACATCAGGGAGTATGGCAGAA‑AAGCAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGCG‑AGGAAAAAATTATGGTGACCAttttcac > 1:242776/1‑248 (MQ=255) gatCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACATAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCATCCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTAcc < 2:32246/250‑1 (MQ=255) gACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAACCGGGCCAATCTAT‑TTATTAAAACAGAAATAGGCGCCCTCCGGAGTCAGATGAACTTAACGAGAACT‑AGCAAAGCACATATCATTGAAGTTCAACTCCGAGAGGATGGCCGAAACA‑AAAAA‑CAAAAATGCACCTTTTGTTTTTCA‑CCTGAACTGTAAGCGAGGAG‑AAAAAATTATGGTGCACATTTTGCCGGTGCATCAATAAGGCAGAtgtg > 2:392646/1‑251 (MQ=255) cGTTTCACGGTACCAAAACCACAGGCGGGAACCAACCGGGTCCTTC‑ATCTTATTAAGCCAGCAATCCACGCCCTCCGGAGTCAGATGACATTAAAGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGGGAGTATGGCAGAA‑CCGAAAAA‑CAAAAAAGCACCTTT‑TTTTTTCAAACAGAAGTGTCAGCGAG‑AGAAAAAAATTATGGGGAACATTTTATCCTTGACTCAATAAAGCAGATGTgggg > 2:452756/1‑250 (MQ=255) cGTTTCACGGTACCAAAAACACAGGCGGGAACCAAACGGGTCCTTT‑ATCTTATTAAACCCACAAACGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAAAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑AAAAAAAGCACCCTT‑GTTTTTCAAACTTAAATGTCAGGGAG‑AGAAAAAAATTATGGTGACCCTTTTACCGTTGAATCCATAAGGCAGATGggggg > 2:152802/1‑250 (MQ=255) cGTTTCACGGTACCAAAAACACAGGCGGGAACCAAACGGGACATTC‑ATCTTCTTAAACCAGCAAACGAAGCACTCCGGGGTCAGATGACCTTAACAGGA‑CCGAGAAAACAGCAAATCATTGATGTTCACCTCAGAAAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCCCCTTT‑GTTTTTCAACCTGAAATGTCCGCGAG‑AGTAAAAAATTTTTGGGAACCTTTTAACGTTTACTCCATAAGGCAGATGggggg > 1:582099/1‑250 (MQ=255) cgtgcACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGAAGCTCTCCTGAGTCAGATGACATTAACCAGA‑CTGAGCAAAGAGGATATCAATTATGGTCACCTCAGAGAGGATGGCAGAA‑CAGAAAAA‑CAAAAATGCCACTTT‑GTTTTTCAACCTGAAGTGTCAGCGAA‑AGTAAAAAATTATTGTGACCCTTTTACCGTTGACTCAATAAGGCAGATGTGGGAc < 1:339920/247‑1 (MQ=255) ccAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATaaa < 1:332264/251‑1 (MQ=255) aaaaaCACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGGGGGACGCAGCGATaaaa > 1:208052/1‑250 (MQ=255) aatcacaGGCGGGATCCAATTGTGGCATTC‑ATCTTAATAAGCCAGCATTCGGCGCTCTCCGGAGTCAGATGACACGAGCGAGA‑CTGAGCAAAGAGCATATCATTGATTTTCCCCTCAGAGAGTATGGCATAA‑CAGAAAAA‑CAAAAATGCACCTGT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGGAAAAAATTATGCTGACCATGTTACCGTTGACTCGATAGGGCAGATGTGGGACGCAGCGCGAAAACgg < 2:42473/248‑2 (MQ=255) aGGCGGGAACCCATCGGGTCATTC‑ATCTTATTAAGCCAGAAATCGACGCTCTCCGGAGGCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAACAATGCACCTTT‑GTTTTTCAACCTGAAGCGTCAGCGAG‑AGTAAAACATTATGGTGACCCTTTTACCGTTGACTCAATAAGGCAGCTGTGGGACGCAGCGATAAAACGTGCCggc > 2:533626/1‑250 (MQ=255) gggAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTcc > 2:152822/1‑251 (MQ=255) ggAACCAATCGGGAAGTTC‑ATCTTATTAACACAGCAATCGTCGATATCCGGAGTCAGATGACATTAAAGAGG‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑AAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAACGAG‑AGTAAAAAATTATGGTGACAATTTTACCGTTGACTCAATAAGGCAGAGGTGGGACGCAGCGCTCAAAAGAGCCGGAcaccc > 2:376712/1‑247 (MQ=255) cAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATc < 2:224884/251‑1 (MQ=255) cAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTACGCCATc > 2:73935/1‑251 (MQ=255) gTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATc < 1:152802/251‑1 (MQ=255) tattaAGCCAGCAATCGACGCTGTCGGGAGTCAGATGACATTAACGAGA‑CTGTGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGAATGGCAGAA‑CAGACAAA‑CAAACATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCCGATGTGGTACGCAGAGATAAACCGTGCCGGACTCCGCCATCGAACATAATCTCAGt > 2:174257/1‑248 (MQ=255) aGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACAt < 1:15517/251‑1 (MQ=255) cGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCCTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGGCCATTTTACCGTTGACTCAATAAGTCAGATGTGTGACGCAGCGATAAAACGTGCCGGACTCCGCCAGCGAAAATCATATCAGTCGAGACATACTTATGCctgct < 2:415910/251‑1 (MQ=255) ctcCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTc > 1:13617/1‑251 (MQ=255) cATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACATCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGCTGTGGGACGCAGCGATAAAACGTGCCGGCCTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATTCCTGCTGGTCCCTGACCGCTGGTGCt > 2:86625/1‑251 (MQ=255) cGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACCCg < 1:389025/251‑1 (MQ=255) aga‑CTGAGCAAAGAGCTTAGCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAAGGCACCTTT‑GGTGTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACAATTTGACCGTTGTCTCAATAAAGCAGATGTGGGACGCAGCGATAAAACGTGCCGGTCTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGGCGCTGTCAGCTGGTGCTAAGCCGGc < 2:444509/251‑1 (MQ=255) aga‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACCCGGc > 1:265186/1‑251 (MQ=255) a‑CTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCCCCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACCCGGCAt < 2:98179/251‑1 (MQ=255) tCATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCCTCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACCCGGCATTTATAGCAAACCAGATg > 1:522348/1‑251 (MQ=255) cATTGATGTTCACCTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACCCGGCATTTATAGCAAACCAGATgg > 1:510274/1‑251 (MQ=255) | TATGGTGTGTTTCTGTTTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTC‑ATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGA‑CTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAA‑CAGAAAAA‑CAAAAATGCACCTTT‑GTTTTTCAACCTGAAGTGTCAGCGAG‑AGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACCCGGCATTTATAGCAAACCAGATGG > NC_000913/1652086‑1652568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |