| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,257,770 | 0 | C | T | 20.0% | 148.2 / 10.8 | 65 | S10L (TCA→TTA) | dinF | DNA damage‑inducible protein F |
| Reads supporting (aligned to +/- strand): ref base C (11/41); new base T (13/0); total (24/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.52e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTACGTAACGGTCAGGTCGTTGTCGCACGTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTATGCTGTTGCTGTTTTTACGCATGAGCACCACCGGGCTGA > NC_000913/4257529‑4258012 | gTACGTAACGGTCAGGTCGTTGTCGCACGTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATctctct < 1:360392/250‑1 (MQ=255) aCGTAACGGTCAGGTCGTTGTCGCACGTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTtc < 1:177352/250‑1 (MQ=255) cGTAACGGTCAGGTCGTTGTCGCACGTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGGTATTCGCAACGGCGACTGGCTGTAAAATATCTCTGAGACCGCGATGCCGCCTGGCGGCGCGG‑GTTGGTTTTTATCTCTCTtcct > 1:319143/1‑249 (MQ=255) tcagtttgTTGTCGCACGTATTGATGACGANGTTTCCGGTAAGCTCATGAAAAAACAGGGCAAGAAAGTCGAACTGGTGGCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCTTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATGCGCAACGGCGACTGGCTGTAACATATCTCTTAGACCGCGATGCCGCTTGGCGTCGCGG‑GTTGTTTTTCAGCTCTCTTCATCAGGCtt < 2:296672/243‑1 (MQ=255) aGGTCTTTGGCGCACGTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTc < 1:296737/251‑1 (MQ=255) gTCGCACGTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGc < 2:37448/251‑1 (MQ=255) gTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAATCCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTGCATCAGGCTTGTCTGC‑ATGGCATTCCTc < 1:515510/251‑1 (MQ=255) gTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGACGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCCACGGCGATTGGCTGTAACATATCTCTGAGACCGCCGTTCCGCCCGGCCTCGCGG‑GTTGTTTTTTTTTTCTTTTCATTAGGGTTTTCTGC‑ATGGccattctc > 1:282351/1‑244 (MQ=255) aTTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCAc < 1:95227/251‑1 (MQ=255) aTTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCAc < 1:450780/251‑1 (MQ=255) gaCGAAGTTACCGTTAAGCGCCTGAAAAAANAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGAAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCAt < 2:252462/250‑1 (MQ=255) gaCGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGGCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCAt < 1:226009/250‑1 (MQ=255) cGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTg < 1:99645/251‑1 (MQ=255) gTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCCACGGCGGCAGGCTGTAACATATCTCTGGGACCGCCATGCCGCCTGGCGTCGCGG‑TGTGTGTTTTATCTCTCTTCTTCCGGCCTGTCTGC‑CCGGCATTCCCCACttttttttcttaaaaacc > 2:14120/1‑235 (MQ=255) taaggaccTGAAAAAACAGTGCAATAAAGTCGAACGGTTGCCAGAAAATAGCTAGTTGAAACCAATTGGCGTTGACCGTCGTCAGCAGAGTCTCACCATTGAAGGGCTGTTGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGTGTCTCGG‑TTTGTTATTCATCGTTCTTCAACAGGCTTGGCTGC‑ATGACATTCCTCACTGCATCTGATAAAGC‑Actc < 2:163834/244‑1 (MQ=255) aaaaaaCAGGGCAATAAAGTCGACCTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGGTATTCGCCACGGCGGCTGGCTGTAACATATCTCTGAGAACCCGATTCCGCCCGGCGTCGCGG‑GTTGTTTTTTATCTCTCTTCCTCAAGCTTTTCTTC‑CTGGCATTTCTCACTTCATCTGATAAAGA‑CCTCTTGCCTCTCGc > 1:164318/1‑251 (MQ=255) aaaaaCAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAAAATATCTCTGGGACCGCCATTCCGCCCGGCGTCGCGG‑GTTTTTTTTTATCTCTCTTTCTCAGGCTTGTCTGC‑ATGGGATTCCTCACTTCCTCTGGTTAAAC‑ACTCTCGCATCTCGcc > 1:515276/1‑251 (MQ=255) aCAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑GTGGGGTTATTTGCAACGGCGGCTGGCTGTAACATATCTCTGAGACCGCGGTGGCGCCTGGCGGCGCGG‑GTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTTATCTTTTAAAAC‑ACTCTGGCCTCCCGCCtctc > 2:144012/1‑248 (MQ=255) cAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGGTATTCGCAACGGCGCCCGGCTGTAACATAACTCTGTGACCGCGATGCCGCCTGGGGGCGCGG‑GTTGTTTTTCATCTCTCTTCATCACGCGTGTCTGC‑ATGGCCATCCTCACTTCATCTGCTAAAGC‑ACCATGGCCTCTCCCCCTAcccctcg > 2:550193/1‑247 (MQ=255) aaTAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGGTATTTGCAACGGCGACTGGCTGGAACATATCTCTGTGACCGCGGTGCCGCCTGGCGTCGCGG‑GTTGTTTTTTATCTCTCTTCATCAGGCTTTTCTGC‑ATGGCATTTCTCACCTCCTCTGGTAAAGC‑AATCTGGCATGTCGCCtttaccattat > 1:9372/1‑242 (MQ=255) gTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTTGGGGTATTCGCAACGGGGACTGGCTGTAACATATCTCTGAGACCGCGCTGCCGCCTGGCGTCGCGG‑TTTGTTTTTTATCTCTCCTCATCCGGCTTCTTTGC‑ATGGCATTTCTCCCTTAATCTGATAAAGC‑ACTCTGGCATCCCGCCTTAccccatactttttc > 1:406496/1‑240 (MQ=255) cGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCa < 1:144012/251‑1 (MQ=255) gTTGCCAGAAAATAGCGAGTTTAAACCAATTGGCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCa < 2:71668/251‑1 (MQ=255) aGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGc < 1:344584/250‑1 (MQ=255) gCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGGTATTTGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCCGGCGTCGCGG‑GTTGTTTTTTATCTCTCTTTATCAGGCTTGTCTGC‑CTGGGATTCCTCACTTCATCTGATAAAAC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCCATATCACCGCTCCGTTGCTg > 1:513451/1‑251 (MQ=255) cGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGAGCTGGCGG‑ATGGGGTTCTTCGCAACAGGGACCGGCTGTAAAATAACTCTGTGACACCGATGCCGCCTGGCGTCGCGGGTTTGTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCCTTGGCCTTC‑TTACTTCAACTTATACAGCCAC‑CTGGGATCTCGTCTTACCCATG‑AATTTCTCCAATATccaccttccctttatgg > 2:373628/1‑235 (MQ=255) gAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTggg < 1:83362/251‑1 (MQ=255) gAGTTTAAACCAATTGTCGTTGACCGTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTggg < 2:31136/251‑1 (MQ=255) gTTTTAACCAATTGTCGTTGACCTTCGTCAGNAGAGCTTCACCAGTGAAGGGCGGGGGGGTTGGGTTTAT‑CGCAACGGCGACTTGCGGTAACTTCTCTCTGAGACCGCGATGCCGTCTGGCGTCGTGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTATCTGC‑ATAGCATTCCTCAATTCATCTGATAAACC‑ACGCGGGCATCTCGACTTCCCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGAc < 2:292789/251‑1 (MQ=255) aCCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGGTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCCTTCCTCACTTCATCTGATAAAAC‑ACTCTTGCATCTCGCCTTACCCCTG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGGCTGGTCg > 1:190500/1‑251 (MQ=255) ccAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTTGCAACGGCGGCCGGCTGTAACATATCTCTGCGGCCGCGATACCGCCTGGCGGCGCGG‑TTTGTTTTTTATCTCTCTTCATAAGGCTTGTCTTC‑CTGGCATTTCTCACTTCCTCTGTTAAAGC‑ACTCTGGCATCTCGCCTTAACCATG‑ATTTTTTCCCATATCCCCGTTCCGTTGCTGGGGCTGGTCgc > 1:501985/1‑250 (MQ=255) gTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGGCTGGCTGTAACATATATCTGGGACCGCGATGCCGCCTGGCGTCGCGG‑GTTTTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCCATACTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATGTATTTT‑TCCAATATACCCGTTCCGTTGCTGGGCCTGGTCGCTAcggc > 1:536865/1‑251 (MQ=255) gTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGt < 1:53493/251‑1 (MQ=255) gTTGAACTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTTACCTATATCTTGGACCGCGATGACGCCTGGCGTCGCGG‑GTTGTTTTTTTTTTCTCTTCATCCGGCATGTCTGA‑CTCGCATTCCTTACCTCATCTGCTAAAAC‑CCTCTGGCCTCTCGACTTCTCCCTG‑ATTTTTTCCCAAATTACCGTTCCGCTGCTGGGGCTGGTCGATAcgggcgg > 2:460822/1‑247 (MQ=255) tGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTTGCAAAGGCGACTGGCTGTAACATATCTCTGTGAACGCGGTTCCCCCTGGCGTCGCGG‑GTTGTTTTTCATCTCTCTTCATCCGGCTTGTCTGC‑ATGGCCTTCCTCACTTCATCTGATAAAAC‑ACTCTGGCATCTAGCCTTACCCATG‑CTTTTCTCCCATATCACCGTTCCGTTGCTGGGACTGGTCGATAAGGGGGT‑a > 1:344062/1‑250 (MQ=255) tGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGCCTGGGTGTAACATATCTCTGAGACCGCCATTCCGCCTGGCGTCGCGG‑GTTGTTTTTTATCTCTCTTCTTCAGGCTTGTTTGC‑ATGGCATTTCTCACTTCATCTGATAAAAC‑ACTCTGGCATCTCGCCTTACCCCTG‑ATTTTCTCCAATATCCCCGTTCCGTTGCTGGGACTGGTCGGTAcggcggga > 1:547587/1‑248 (MQ=255) gACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAat < 1:121370/210‑1 (MQ=255) gACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑aa < 2:132384/250‑1 (MQ=255) tCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGGTATTCGCAACGGCGACTGGCTGGAACATATCTCTGAGACCGCGATTCCGACTGGCGGCGCGG‑GTTGTTTTTCATCTCTCTTCATTAGGCTTGTATGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCCTG‑AGTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGGCGGTACGGCGGT‑AAtttgtg > 1:26945/1‑247 (MQ=255) cGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTc < 1:95015/250‑1 (MQ=255) cGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCa < 1:496621/251‑1 (MQ=255) agcagAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGGTATTCGCAACGGCGACTGGCTGTAACAAATCTCTGAGACCGCGATGCCGCCCGGCGTCGCGG‑GTTGTTTTTTATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCCCTTCATTTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATAACACCCTTCCGTTTCTGGGACTGGTCGATAaggcgggataattgtatttt > 1:34192/1‑237 (MQ=255) gcagAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTTTTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCCGGCGTCGCGG‑GTTGTTTTTTCTCTCTCTTCATCAGGCTTGTCTGC‑ATGGCCTTCCTCACTTCATCTGATAAAGC‑ACTCTTGCATCTCCCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATAcggcgggaaattgggtctttt > 1:569795/1‑236 (MQ=255) agagCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTACCAACGGCGGATGGCTGGAACATTTCTCTGAGACCCCGCTTCCGCCTGGCGTCGCGG‑TTTTTTTTTCATCTCTCTTCATCAGGGTTTTCTGG‑ATAGCATTTCTCCCTTTCTCTTATAAAGC‑ACTCTGGCCTCTTGCCTTACCCACG‑ATTTTTTCCCATATCACCGCTCCGTTGCTGGGGCTGGGCGATACGGCGGT‑AAATgggtcacttttt > 1:471749/1‑241 (MQ=255) agagCTTCACCATTGAAGGGCTGGCGG‑TTGGGGGTATTTGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑GTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑CTGGCATTTCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCCTG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGtgcatgtgtgttttgtt > 1:310668/1‑235 (MQ=255) gCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGc < 1:353960/251‑1 (MQ=255) ttCACCATTGAAGGGCTGGCGG‑ATGGGGGTATTCGCCACGGCGGCTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑GTTGTTTTTCATCTCTCTTCATCAGGCCTGTCTGC‑AAGGCATTCCTCACTTCATCTTATAAAGG‑ACTCTGGCACCTCGCCTTACCCATG‑ATTTTTTCCAATATCACCGTTCCGGTGCTGGGACTGGTCGGTTCGGCGGGGATTTGGTCTTCTTGAtgacc > 1:100980/1‑247 (MQ=255) tCACCATTGAAGGGCTGGGGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGTTCATCTTGATAGcca < 2:84414/250‑2 (MQ=255) tCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACAGATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTTTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑AGTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGcc < 2:229940/249‑1 (MQ=255) cACCAGTGATGGGCTGGCGG‑TTTGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCGCGTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATGTGACCGTTCCGGTGCTGGGACTGGTCTATACCGCGGT‑AATTGGTCGTCTTGATAGCCCg < 2:34954/250‑1 (MQ=255) ggagg‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTTAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGggcggc < 1:531595/247‑1 (MQ=255) gCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGt < 1:582970/251‑1 (MQ=255) aTTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTTGGCGTCTTGATGGCGCGGGTTTTTTgggggggggggggggtggtgg > 2:25625/1‑233 (MQ=255) gacgggcggTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGTATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑TATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAAAGGCGACCAg < 2:515276/243‑1 (MQ=255) ggCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCttt < 2:513451/251‑1 (MQ=255) aaCATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCttt < 1:137732/251‑1 (MQ=255) aaCATATCTCTGAGACCCCGATGCCGCCTGGCGTCGCGG‑TTTTTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACGTCATCTGATAAAGC‑ACTCTGGCAGCTCGCCTGACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGATGGGACTGGTCGATACGTCGGT‑AATTGGTCATCTTGAGAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCttt < 2:468838/251‑1 (MQ=255) aCATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAAc < 2:28115/231‑1 (MQ=255) ctGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑TTGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCGGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTAtgctg < 1:540621/248‑1 (MQ=255) ctGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTAtgct < 1:467461/247‑1 (MQ=255) gaCCGCGATGGCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTGTCTCTTTAtgctgttgctgt < 2:195635/251‑1 (MQ=255) gATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTATGCTGTTGCTGTTTTTAc < 1:135525/251‑1 (MQ=255) gATGCCGCCTGGCGTCGCGG‑TTGGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCCTTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTATGCTGTTGCTGTTTTTAc < 2:356573/251‑1 (MQ=255) g‑tttgtttTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTATGCTGTTGCTGTTTTTACGCATGAGCACCACCGGGCt < 2:190500/251‑1 (MQ=255) tgtttTTCATCGCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTATGCTGTTGCTGTTGTTACGCATGAGCACCACCGGGCTGa < 1:460822/250‑1 (MQ=255) | GTACGTAACGGTCAGGTCGTTGTCGCACGTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGG‑TTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGG‑TTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGC‑ATGGCATTCCTCACTTCATCTGATAAAGC‑ACTCTGGCATCTCGCCTTACCCATG‑ATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGT‑AATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTATGCTGTTGCTGTTTTTACGCATGAGCACCACCGGGCTGA > NC_000913/4257529‑4258012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |