Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,299,522 Δ12,535 bp mdtPalsB mdtP, mdtO, mdtN, ytcA, yjcS, alsK, alsE, alsC, alsA, alsB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4299522 4312056 12535 42 [0] [0] 43 mdtP–alsB mdtP,mdtO,mdtN,ytcA,yjcS,alsK,alsE,alsC,alsA,alsB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42995210 (0.000)42 (0.580) 39/492 0.4 100% intergenic (‑155/+43) fdhF/mdtP formate dehydrogenase H/putative multidrug efflux pump outer membrane channel
?NC_000913 4312057 = 0 (0.000)intergenic (‑15/+44) alsB/alsR D‑allose ABC transporter periplasmic binding protein/DNA‑binding transcriptional repressor AlsR

CCGCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTTCTCGACGACGGGACCTGCCTGATACCCGCCGCCCAGCGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCG  >  NC_000913/4299279‑4299766
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                     
ccGCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaag                                                                                                                                                                                                                                                 <  1:74735‑M1/249‑7 (MQ=255)
              ttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAATCCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCTTCAGTTTTGACGTGAggtaaggggacagtaactccg                                                                                                                                                                                                                                  <  1:463562‑M1/250‑22 (MQ=255)
                  cGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatg                                                                                                                                                                                                                             <  1:249922‑M1/251‑27 (MQ=255)
                     tATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggc                                                                                                                                                                                                                           <  1:133032‑M1/250‑29 (MQ=255)
                      aTCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgcgggcgg                                                                                                                                                                                                                         >  2:299621‑M1/1‑221 (MQ=255)
                        cgacgaCCAGGTTGATTTTGCACCCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAACCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcgga                                                                                                                                                                                                                        <  1:282618‑M1/250‑32 (MQ=255)
                             acCAGGTTGATTTTGCAACCTGATGCGCACTAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacc                                                                                                                                                                                                                  >  1:90389‑M1/1‑214 (MQ=255)
                                  gTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGAGACGACATTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagcaactccgcgctggcggaattaccttttt                                                                                                                                                                                                             >  2:569049‑M1/1‑209 (MQ=255)
                                     gATTTTGCAACCTGATGCGTAATAGGGGCAAACCGTGACGGCTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttct                                                                                                                                                                                                           <  2:528334‑M1/250‑45 (MQ=255)
                                        tttGCAAGCTGATGCGCAATAGGGACAAACCGTGACGACTTCTTTCATCGGTCTCGCTACAGTTAATCAAATCACGCATACGAGCTCTCGACAACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAACCTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTTAgggaaggggcaagtaactccgcgagggcggaaatacctttttcttctt                                                                                                                                                                                                       >  2:203574‑M1/1‑203 (MQ=255)
                                               ccTGATGCGCAATAGGGTCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCGCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACGCTGACGAAAAACAGGCTGTCGTCAGTTTTGGCGTGAggtaaggggacagtaactccgcgatggggtaattacctttttcttgtttgagctc                                                                                                                                                                                                <  2:195345‑M1/251‑56 (MQ=255)
                                                          aTAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtg                                                                                                                                                                                        >  1:545307‑M1/1‑185 (MQ=255)
                                                             gggtcaaacCGAGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATAAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTCTTTATTCAAAACTCTGCCGAAAAACAGGCTGTCGTCATTTTTGTCGCGAggtaaggggacagcaactccgcgatggtggaattacctttttcttatttcagcgcgcatggtgaga                                                                                                                                                                                     >  2:314542‑M1/5‑182 (MQ=255)
                                                               ggCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGGTTTGACGAGAggtaaggggaaagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagcagaa                                                                                                                                                                                 >  1:321837‑M1/1‑180 (MQ=255)
                                                                 cAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatc                                                                                                                                                                              <  1:399095‑M1/251‑74 (MQ=255)
                                                                      cGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgaggagaaatcaaca                                                                                                                                                                          >  2:234586‑M1/1‑173 (MQ=255)
                                                                             acTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgcc                                                                                                                                                                  <  1:299621‑M1/251‑86 (MQ=255)
                                                                                tttttCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCGCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccgg                                                                                                                                                                <  1:73770‑M1/250‑88 (MQ=255)
                                                                                   ttCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttt                                                                                                                                                             <  2:135192‑M1/250‑91 (MQ=255)
                                                                                      aTCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttc                                                                                                                                                         >  1:388653‑M1/1‑157 (MQ=255)
                                                                                              cGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCTCATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCGGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggtgttttccatattaa                                                                                                                                                 <  2:491251‑M1/251‑103 (MQ=255)
                                                                                                 tCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatat                                                                                                                                              >  1:229655‑M1/1‑146 (MQ=255)
                                                                                                       tAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagct                                                                                                                                         <  1:311841‑M1/250‑111 (MQ=255)
                                                                                                            aaaacacgcaTACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttca                                                                                                                                   <  1:477619‑M1/247‑117 (MQ=255)
                                                                                                                                cGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacag                                                                                                                <  1:225509‑M1/250‑136 (MQ=255)
                                                                                                                                cGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgac                                                                                                                  <  1:509218‑M1/248‑134 (MQ=255)
                                                                                                                                  aCTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaagtgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagaga                                                                                                             <  2:233833‑M1/251‑139 (MQ=255)
                                                                                                                                                    tATGCCACATGTTCAGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAACAACAGGATGTCGGCAGTTTTGACGTGAtgttaggggacagtaactccgcgatggcggaattacgtttgtcttatttcagcgctccttgtgagaagaaatcaacaattgcgccggttttttccatattaatagtagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagc                                                                                            <  2:313268‑M1/250‑156 (MQ=255)
                                                                                                                                                        ccACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggt                                                                                       <  1:553254‑M1/251‑161 (MQ=255)
                                                                                                                                                         cacaTTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttggtcaatgtttagctgggcgacagagacaaaaaaagcgtccagcaaggtt                                                                                      <  2:40502‑M1/251‑162 (MQ=255)
                                                                                                                                                           caTTTTATGTGGGGTTATTCCCTGATATCACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgacggcggaattacctttttcttatttcagcgcgcatggcgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcacggttgg                                                                                    >  2:544977‑M1/1‑88 (MQ=255)
                                                                                                                                                                 aTGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgta                                                                               >  1:141842‑M1/1‑82 (MQ=255)
                                                                                                                                                                    tgGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatat                                                                           >  1:96955‑M1/1‑79 (MQ=255)
                                                                                                                                                                                    tatTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGATGTCGTCAGTCTTGACGTGAggtaaggggacagtaactacgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccctattaatattagcttgatcaatgttgagctgggcgacagcgacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggaatt                                                            >  2:417339‑M1/1‑63 (MQ=255)
                                                                                                                                                                                        aCGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgac                                                       >  1:309764‑M1/1‑59 (MQ=255)
                                                                                                                                                                                                              tctGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggc                                 >  1:304933‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                                         aCAGGCTGTCGTCTGTTTTGACGTGAggtaaggggacagtaactccgcgatggcgggattacctttttcttattacagcgcgcctggtgagaagaaataaacaattgcgccggttttttccatattattattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattattgccgagggattaagacctaataacggcgtttccggggctggtgggaaa                       >  2:129‑M1/1‑26 (MQ=255)
                                                                                                                                                                                                                             gCTGTCGTCAGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataat                  <  1:499150‑M1/251‑230 (MQ=255)
                                                                                                                                                                                                                                      aGTTTTGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggc         <  1:125738‑M1/251‑239 (MQ=255)
                                                                                                                                                                                                                                         tttGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggcc        >  2:442872‑M1/1‑10 (MQ=255)
                                                                                                                                                                                                                                           tGACGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcctggtgagaagaaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcgtccagcaaggttggttgtaatattcttgccgaggcattacgacctaataacggcgtttccggggctggtgagcaaataatatgatcggccagtt    >  1:20637‑M1/1‑8 (MQ=255)
                                                                                                                                                                                                                                             aCGTGAggtaaggggacagtaactccgcgatggcggaattacctttttcttatttcagcgcgcgtggtgataataaatcaacaattgcgccggttttttccatattaatattagcttgttcaatgttgagctgggcgacagagacaaaaaaagcttccagcaaggttggttgtaatattcttggcgttgcattgcgtcctaataacggcgtttccggggctggtgagcaaataatatgatcggccagtttc  <  1:32064‑M1/251‑246 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                     
CCGCCCGGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTTCTCGACGACGGGACCTGCCTGATACCCGCCGCCCAGCGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCG  >  NC_000913/4299279‑4299766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: