Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,235,905 16376 bp→AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC yjbEmalM yjbE, yjbF, yjbG, yjbH, yjbT, psiE, xylE, malH, malG, malF, malE, malK, lamB, malM

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4235905 4252280 16376 49 [0] [0] 59 yjbE–malM yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE,malH,malG,malF,malE,malK,lamB,malM

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42359040 (0.000)36 (0.630)
+AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC
33/388 0.3 100% intergenic (+497/‑2) pgi/yjbE glucose‑6‑phosphate isomerase/uncharacterized protein YjbE
?NC_000913 4252281 = 0 (0.000)intergenic (+1807/‑225) malM/ubiC maltose regulon periplasmic protein/chorismate lyase

AAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGT  >  NC_000913/4235656‑4236154
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          
aaaTAGATTTTTAACCGTTGTTTATTTCGGCAAATACGCAGATTAATTGCTTTTGTTTTTATTTTATGTTTATGATTTTTATTGTTTTTTAAATATAAGTTGAAACTTATATTTGATATTCATACCATTTATCCTAAAACGCAATCGCTAATTCCCCGCGCTGTAATTCGCATGCTTTATTTGGGTATACTATATCCCGCCCGACATGTTTTTGGGTAAATATCTATTAATTCAATGAATGGAAATTGTa                                                                                                                                                                                                                                                           >  2:49800‑M1/1‑249 (MQ=255)
      aTTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaa                                                                                                                                                                                                                                                      >  1:170322‑M1/1‑243 (MQ=255)
           tAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaa                                                                                                                                                                                                                                                <  1:340083‑M1/250‑13 (MQ=255)
             aTCGTTGTTTCTTTCGGAAAATACGCAGATTCATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTCTTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCTAATTATCCTAAAACGCCATCGCTAATTCCAAGAGCCGTAATACGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGCACTGTTTTTGGGAAAATCTACATTCATTCAATGAAGGGAAATTGAaagtacaggaaaac                                                                                                                                                                                                                                              >  2:247329‑M1/1‑236 (MQ=255)
                   gttTAGTTCGGAAAATACGCAGAGTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATGTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAACTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaac                                                                                                                                                                                                                                        <  2:152949‑M1/250‑21 (MQ=255)
                                 aTACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaa                                                                                                                                                                                                                          >  1:337295‑M1/1‑216 (MQ=255)
                                    cGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgc                                                                                                                                                                                                                      <  1:541182‑M1/251‑39 (MQ=255)
                                     gCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgcc                                                                                                                                                                                                                     <  1:370142‑M1/251‑40 (MQ=255)
                                       aGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccg                                                                                                                                                                                                                    >  1:561469‑M1/1‑210 (MQ=255)
                                                   tttGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgct                                                                                                                                                                                                       >  1:233995‑M1/1‑198 (MQ=255)
                                                    ttGTTTTTATTTTAAGTGTATGATTTTTATTGTTATTTTAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTATTTGTGTATTCTTGATCCCGCCCGAAATTTTTTTGGGTATATCTCCATTCATACAATGAAGGGAAATTGTaagtaaaggaaaacatcatcgttcgcaaaagaaaatgccgatttgcggccgct                                                                                                                                                                                                       <  1:65355‑M1/250‑54 (MQ=255)
                                                                 aaGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGCGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaaggaaaggaaaac                                                                                                                                                                                         >  1:27938‑M1/1‑184 (MQ=255)
                                                                       aTGATTTTTATTGTTATTTAAATATACGTTGACACTTATATTTGATATTCATTCCAATTATCCTAAAAAGCCATCGCTAATTACCCGCGCCGTAATTCGCATGATTTAGTTGTGTATACTCGCTCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgataagtaaaggaaaacatcacc                                                                                                                                                                                   >  2:469965‑M1/1‑178 (MQ=255)
                                                                               tATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctg                                                                                                                                                                            <  1:59198‑M1/250‑81 (MQ=255)
                                                                                     tATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGACATCGCTAATTCCCCGCGCCGTAATTCACATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGTAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcct                                                                                                                                                                     >  2:539148‑M1/1‑164 (MQ=255)
                                                                                       tttAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTCATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgacgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctgg                                                                                                                                                                   >  2:442831‑M1/1‑162 (MQ=255)
                                                                                        ttAAATATAAGTTGAAACTTATATTTTATATTCATGCCAATTATCCTAAAACTCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCGCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgagttgcggccgctaagtaaaggaaaacatcaccgttcttggcatcctgg                                                                                                                                                                   <  2:362716‑M1/250‑90 (MQ=255)
                                                                                            atatAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacat                                                                                                                                                                                                                                            <  1:198229‑M1/173‑17 (MQ=255)
                                                                                            atatAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacat                                                                                                                                                                                                                                            >  2:198229‑M1/1‑157 (MQ=255)
                                                                                                  gTTGAAACTTATATTTGATTTTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttccgggcatcctggacggtgatgcc                                                                                                                                                        <  1:290055‑M1/251‑101 (MQ=255)
                                                                                                    tGAAACTTCTATTTGATATTCATTCAAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGGaagtaaaggaaaacatcaacgttcgcaaaggaaaatgccgatttgcggccgctaaggaaagaaaaacatacccgttcattgaatcctggacggtgatgcccc                                                                                                                                                      >  2:385386‑M1/1‑149 (MQ=255)
                                                                                                       aaCTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctac                                                                                                                                                   >  1:204238‑M1/1‑146 (MQ=255)
                                                                                                       aaCTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctac                                                                                                                                                   >  2:28976‑M1/1‑146 (MQ=255)
                                                                                                                     attcattcCAATTATCCTAAAACGCCATCGCTAATTACCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggccggtgatgcacctacggttgccctcgcc                                                                                                                                      >  2:300135‑M1/1‑132 (MQ=255)
                                                                                                                            ccAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGACGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctaaggttgccctcgccagcacggg                                                                                                                              >  2:527289‑M1/1‑125 (MQ=255)
                                                                                                                            ccAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaagg                                                                                                                                                                                                                                                   >  2:277357‑M1/1‑125 (MQ=255)
                                                                                                                            ccAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaagg                                                                                                                                                                                                                                                   <  1:277357‑M1/134‑10 (MQ=255)
                                                                                                                                         aaCGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcg                                                                                                                 >  2:407177‑M1/1‑112 (MQ=255)
                                                                                                                                                        tCCCCGCGCCGTAATTCGCATGCTTTATTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatc                                                                                                   <  2:526472‑M1/250‑154 (MQ=255)
                                                                                                                                                        tCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatc                                                                                                   <  1:490487‑M1/250‑154 (MQ=255)
                                                                                                                                                          cccGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgtt                                                                                                <  1:248943‑M1/251‑157 (MQ=255)
                                                                                                                                                              cgcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcggaaggttcaacatcgttttac                                                                                            >  1:59283‑M1/1‑91 (MQ=255)
                                                                                                                                                                      ttCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcat                                                                                    >  2:450464‑M1/1‑83 (MQ=255)
                                                                                                                                                                          cATGCTTTAGTTGTGTATACTCGATCCCACCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGCAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgg                                                                                >  2:28673‑M1/1‑79 (MQ=255)
                                                                                                                                                                          cATGCTTTAGTTGTGTATACTAGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaaaatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaacgttaccagcatcctggccggtgatgcccctacggttgccctcgccagcacgggcctcggtaaagcgaaaggttcaacatcgttttaccacttcatgcgt                                                                                >  2:509576‑M1/1‑79 (MQ=255)
                                                                                                                                                                                 tAGTTGTGTATCCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttg                                                                          <  2:509215‑M1/250‑179 (MQ=255)
                                                                                                                                                                                  aGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacagcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatccccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgc                                                                         <  1:228474‑M1/250‑180 (MQ=255)
                                                                                                                                                                                        gtATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttg                                                                  <  1:323366‑M1/251‑187 (MQ=255)
                                                                                                                                                                                          ataCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtacaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggcagctaagtaaaggaaaacataaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgtt                                                                >  2:407636‑M1/1‑63 (MQ=255)
                                                                                                                                                                                                gATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggccaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtat                                                          >  1:330296‑M1/1‑57 (MQ=255)
                                                                                                                                                                                                   cccgcccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtatt                                                         >  1:112706‑M1/1‑54 (MQ=255)
                                                                                                                                                                                                      gcccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatc                                                    <  1:247329‑M1/251‑201 (MQ=255)
                                                                                                                                                                                                       cccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatc                                                    >  2:113444‑M1/1‑50 (MQ=255)
                                                                                                                                                                                                                          aaTCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatct                                >  2:124112‑M1/1‑31 (MQ=255)
                                                                                                                                                                                                                                     attcaATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccattcctggcatcctggacggtgaggcccctacggttgccctcgcaagcacgggcatcggtaaagcgtaaggttccacatcgttttaacacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgttttacatcgcccgtaaccac                     >  2:95445‑M1/1‑20 (MQ=255)
                                                                                                                                                                                                                                               gggAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacat                                  >  2:157788‑M1/1‑10 (MQ=255)
                                                                                                                                                                                                                                               gggAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacat                                  <  1:157788‑M1/228‑219 (MQ=255)
                                                                                                                                                                                                                                                       gtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggaaggtgatgcccctacggttgccctcgccagcacgggcatcggcaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaacaacttttctgcgatacaatgc   >  2:513900‑M1/1‑2 (MQ=255)
                                                                                                                                                                                                                                                        taagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggcgatgaccctacggttgcactcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaccacttttctgcgatacactgcc  >  2:547850‑M1/1‑1 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          
AAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGT  >  NC_000913/4235656‑4236154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: