Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,499,401 Δ12,725 bp yhfL[yhfZ] yhfL, frlA, frlB, frlC, frlD, frlR, yhfS, yhfT, yhfU, php, yhfW, yhfX, yhfY, [yhfZ]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3499401 3512125 12725 53 [0] [0] 54 yhfL–[yhfZ] yhfL,frlA,frlB,frlC,frlD,frlR,yhfS,yhfT,yhfU,php,yhfW,yhfX,yhfY,[yhfZ]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 34994000 (0.000)53 (0.730) 50/492 0.2 100% intergenic (+199/‑48) cysG/yhfL siroheme synthase/DUF4223 domain‑containing lipoprotein YhfL
?NC_000913 3512126 = 0 (0.000)coding (219/906 nt) yhfZ putative DNA‑binding transcriptional regulator YhfZ

TGGCCTGCGCGATAAACTGAACTGGTTCTCCAACCATTAATTTAACCCGGGCCAGAGAATTCTGGCCTTCTTAATGACTCTTTTTATATATTCAGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTGCTTATATTCATATAATCAATGAATATTAATTAATATATAATACATAGGGAATGTAAATGAACAAATTTATTAAAGTTGCACTGGTAGGTGCAGTACTGGCTACGTTAACTGCATGTACTGGTCATATTGAAAACCGTGATAAGAACTGCTCTTACGACTACCTGCTGCACCCGGCAATTTCTATTTCTAAAATCATTGGCGGTTGCGGTCCTACTGCACAGTAAGTCTCTGACAGAAATCGGCTAACACCGGTTT  >  NC_000913/3499162‑3499646
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                      
tgGCCTGCGCGATACACTGAACTGGTTCTCCAACCATTAATTTACACCGGGCCAGAGAATTCTGGCCTTCTTAATGACTCTTTTTATATATTCCGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTAACCGTTACAGCGCCTTACAAAATTAAGTCATTCGCTCACTGCCTACAATTAAATCTTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCatcgaccagat                                                                                                                                                                                                                                             >  2:342029‑M1/1‑239 (MQ=255)
       cgcgATAAACTGAACTGGTTCTCCAACCATTAATTTAACCCGGGCCAGAGAATTCTGGCCTTCTTAATGACTCTTTTTATATATTCAGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgcc                                                                                                                                                                                                                                      >  1:35303‑M1/1‑232 (MQ=255)
             aaaCTGAACTGGTTCTCCAACCATTAATTTAACCCGGGCCAGAGAATTCTGGCCTTCTTAATGACTCTTTTTATATATTCAGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcg                                                                                                                                                                                                                                <  1:468556‑M1/250‑25 (MQ=255)
             aaaCTGAACTGGTTCTCCAACCATTAATTTAACCCGGGCCAGAGAATTCTGGCCTTCTTAATGACTCTTTTTATATATTCAGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcg                                                                                                                                                                                                                                <  2:452870‑M1/250‑25 (MQ=255)
                    actgGTTCTCCAACCATTAATTTAACCCGGGCCAGAGAATTCTGGCCTTCTTAATGACTCTTTTTATATATTCAGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggc                                                                                                                                                                                                                        <  1:134024‑M1/251‑33 (MQ=255)
                               aaCCATTAATTTAACCCGGGCCAGAGAATTCTGGCCTTCTTAATGACTCTTTTTATATATTCAGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttaaatccgt                                                                                                                                                                                                             >  2:192202‑M1/1‑208 (MQ=255)
                                                         aaTTCTGGCCTTCTTAATGACTCTTTTTATCTATTCAGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgtttt                                                                                                                                                                                   >  2:233216‑M1/1‑182 (MQ=255)
                                                                 ccTTCTTAATGACTCTTTTTATATATTCAGCAAATAAAACATAGCCCCTTAATAAATCTTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaccgcgg                                                                                                                                                                           >  2:331378‑M1/1‑174 (MQ=255)
                                                                           gACTCTTTTTATATATTCAGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtca                                                                                                                                                                  <  1:551009‑M1/250‑87 (MQ=255)
                                                                                         atTCAGCAAATAAAACAAGGCCCCTTAATAAATATTATCTGCTAATTGGTTAGATTCTCCGTTCCAGCGACTTGAAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTAGCGTTCTTAACGGGCAGTCGTCGTATATTCctcgaccagataactgccattgcgcccacggcggtcaatccgtatcgctccgcgtgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaac                                                                                                                                                   <  2:243967‑M1/251‑102 (MQ=255)
                                                                                                           aGCCCCTTAATAAATATTATCTGCTAATGTGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaccgcggcctgcgtcaggccaacggatgaacggcattcatttgccagct                                                                                                                                 <  2:425259‑M1/251‑120 (MQ=255)
                                                                                                                    ataaataTTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatgg                                                                                                                        >  2:169155‑M1/1‑123 (MQ=255)
                                                                                                                          attatCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggagttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttc                                                                                                                   >  2:139658‑M1/1‑117 (MQ=255)
                                                                                                                                 gCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgatt                                                                                                           >  1:477143‑M1/1‑110 (MQ=255)
                                                                                                                                  cTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtctcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaccggatgaacggcattcatttgccagctcatctatggttttcaatctattc                                                                                                          >  2:552364‑M1/1‑109 (MQ=255)
                                                                                                                                    aaTGGTTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattac                                                                                                         <  1:225013‑M1/250‑144 (MQ=255)
                                                                                                                                       gggTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgca                                                                                                     <  1:449261‑M1/251‑148 (MQ=255)
                                                                                                                                        ggTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttaaatcgattactgca                                                                                                     >  2:2293‑M1/1‑103 (MQ=255)
                                                                                                                                                  aCCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcaccc                                                                                           >  2:199765‑M1/1‑93 (MQ=255)
                                                                                                                                                        aCAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgcctccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaccaaat                                                                                    >  2:25652‑M1/1‑87 (MQ=255)
                                                                                                                                                            cGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgctcttttcacccaacaaataacg                                                                                <  1:102098‑M1/251‑169 (MQ=255)
                                                                                                                                                            cGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacg                                                                                >  2:238987‑M1/1‑83 (MQ=255)
                                                                                                                                                                          aaGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcccccaacaaataacgggcca                                                                           >  2:371708‑M1/1‑69 (MQ=255)
                                                                                                                                                                          aaGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggcca                                                                           <  1:371708‑M1/242‑174 (MQ=255)
                                                                                                                                                                            gTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataaagggccagcgtcgtgatg                                                                >  2:555058‑M1/1‑67 (MQ=255)
                                                                                                                                                                                  cGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacg                                                          >  1:138110‑M1/1‑61 (MQ=255)
                                                                                                                                                                                      cACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgcct                                                       <  2:138110‑M1/250‑194 (MQ=255)
                                                                                                                                                                                         tGACGCCAATTAAATATTACTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataaatgccattgcgcacacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgacagctcatctatggttttcaatcgattaccgcacttttcacacaacaaataacggtccagcgtcatgaggacgacgacttctt                                                   >  2:492099‑M1/1‑54 (MQ=255)
                                                                                                                                                                                          gACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttt                                                  <  1:435442‑M1/251‑199 (MQ=255)
                                                                                                                                                                                          gACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggacaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttt                                                  >  1:346387‑M1/1‑53 (MQ=255)
                                                                                                                                                                                              ccAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgacaagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccaacgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttg                                              >  2:402310‑M1/1‑49 (MQ=255)
                                                                                                                                                                                                    aaaTATTCCTGTATCGTTCTTAACGAGCAGTATATGTATATGCctctaccagataactgccattgcgtccacggcgttcaatccggatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggtgttcaagcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgtcttcttttttgataaac                                        <  2:367163‑M1/251‑209 (MQ=255)
                                                                                                                                                                                                        atTCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcgtttttgataaacgtt                                     <  1:139658‑M1/250‑212 (MQ=255)
                                                                                                                                                                                                         ttCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctctaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgagtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattacctcacttttcacccaacaaataacggaccagcgtcgtgatgacgacgccttcttttttgataaacgttcg                                   >  1:6518‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                          tCCTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcg                                   <  2:304407‑M1/250‑214 (MQ=255)
                                                                                                                                                                                                           ccTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgac                                 <  1:438171‑M1/251‑216 (MQ=255)
                                                                                                                                                                                                           ccTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataacagacattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcatcgtgatgacgacgccttcttttttgataaacgttcgac                                 >  1:576452‑M1/1‑36 (MQ=255)
                                                                                                                                                                                                           ccTGTATCGTTCTTAACGAGCAGTCTTCGTATATTCcccgaccagataactgccattgcgcccacggcggtcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgac                                 <  1:102707‑M1/251‑216 (MQ=255)
                                                                                                                                                                                                                aTCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataactggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgacgcata                            <  1:494835‑M1/251‑221 (MQ=255)
                                                                                                                                                                                                                aTCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgac                                                              >  2:439503‑M1/1‑31 (MQ=255)
                                                                                                                                                                                                                aTCGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgac                                                              <  1:439503‑M1/217‑187 (MQ=255)
                                                                                                                                                                                                                  cGTTCTTACCGAGCCGTCTTCGTATATTCctcgaccagataaccgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttctcccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgacgcataa                           <  2:124706‑M1/250‑222 (MQ=255)
                                                                                                                                                                                                                  cGTTCTTAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccccggcgttcaatccgtagcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgacgcataat                          <  2:419986‑M1/251‑223 (MQ=255)
                                                                                                                                                                                                                       ttAACGAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttcataaacgttcgcagcataataaatt                     >  2:540152‑M1/1‑24 (MQ=255)
                                                                                                                                                                                                                            gAGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgacgcataataaattttccg                >  1:529341‑M1/1‑19 (MQ=255)
                                                                                                                                                                                                                             aGCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgacgcataataaattttcagt               <  1:559017‑M1/251‑234 (MQ=255)
                                                                                                                                                                                                                              gCAGTCTTCGTATATTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgacgcatactaaattttcagt               >  2:424195‑M1/1‑17 (MQ=255)
                                                                                                                                                                                                                               ccgtcttcgtatattccacgacccgataaccgccatcgcgccctcggcgttcaagccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaactgatgaacggcattcattttccagctcatctatggttttcaatcgattaccgcacttttcccccaacaaataacgggccagcgtcgagatgacgacgccttcttttttgataaacgttcgacgcataataaattttcagtaa             <  2:576452‑M1/242‑236 (MQ=255)
                                                                                                                                                                                                                                 gtcttcgtatattcctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatc                                                                                                               >  2:415621‑M1/8‑14 (MQ=255)
                                                                                                                                                                                                                                 gtcttcgtatattcctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatc                                                                                                               <  1:415621‑M1/144‑138 (MQ=255)
                                                                                                                                                                                                                                         atatTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgacgcataataaattttcagtaaattgaatatt   <  1:444185‑M1/251‑246 (MQ=255)
                                                                                                                                                                                                                                         atatTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgtgttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcggcgtgatgacgacgccttcttttttgataaacgttcgacgcataataaattttcagtaaattgaatat    <  1:342029‑M1/250‑245 (MQ=255)
                                                                                                                                                                                                                                          tatTCctcgaccagataactgccattgcgcccacggcgttcaatccgtatcgctccgcttgactccagcgttttcaacgcggcctgcgtcaggccaacggatgaacggcattcatttgccagctcatctatggttttcaatcgattaccgcacttttcacccaacaaataacgggccagcgtcgtgatgacgacgccttcttttttgataaacgttcgacgcataataaattttcagtaaattgaatattt  >  1:336898‑M1/1‑5 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                      
TGGCCTGCGCGATAAACTGAACTGGTTCTCCAACCATTAATTTAACCCGGGCCAGAGAATTCTGGCCTTCTTAATGACTCTTTTTATATATTCAGCAAATAAAACATAGCCCCTTAATAAATATTATCTGCTAATGGGTTATATTCACCGTTACAGCGACTTACAAAATTAAGTCATTCGCTCACTGACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTGCTTATATTCATATAATCAATGAATATTAATTAATATATAATACATAGGGAATGTAAATGAACAAATTTATTAAAGTTGCACTGGTAGGTGCAGTACTGGCTACGTTAACTGCATGTACTGGTCATATTGAAAACCGTGATAAGAACTGCTCTTACGACTACCTGCTGCACCCGGCAATTTCTATTTCTAAAATCATTGGCGGTTGCGGTCCTACTGCACAGTAAGTCTCTGACAGAAATCGGCTAACACCGGTTT  >  NC_000913/3499162‑3499646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: