Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,985,842 Δ47,769 bp yqeG[idi] 39 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2985842 3033610 47769 59 [0] [0] 59 yqeG–[idi] yqeG,yqeH,yqeI,yqeJ,yqeL,yqeK,ygeG,ygeH,ygeI,insD4,insC4,ygeQ,glyU,actS,xdhA,xdhB,xdhC,ygeV,ygeW,ygeX,ygeY,hyuA,yqeA,yqeB,yqeC,mocA,ygfK,ssnA,ygfM,xdhD,xanQ,guaD,ghxQ,ygfS,ygfT,uacT,yqfG,yqfH,[idi]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 29858410 (0.000)59 (0.810) 55/492 0.1 100% intergenic (‑249/‑6) yqeF/yqeG putative acyltransferase/putative transporter YqeG
?NC_000913 3033611 = 0 (0.000)coding (547/549 nt) idi isopentenyl‑diphosphate Delta‑isomerase

GCACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAAGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTTTGTTTAATTTGTAGATGATACGTTCAGATAATGTCTAATATTTGGTCTAAAGAAGAAACTCTGTGGAGTTTCGCGCTCTACGGCACAGCCGTTGGTGCAGGCACGCTCTTCCTTCCTATTCAGTTAGGTTCGGCAGGGGCTGTGGTCCTGTTTATTACTGCTCTGGTCGCCTGGCCTTTAACATATTGGCCACATAAAGCCTTGTGCCAGTTCATCCTCTCATCAAAAACATCAGCAGGTGAAGGGATAACGGGCGCGGTAACACAC  >  NC_000913/2985602‑2986083
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                  
gCACCAATTAACCGTGCAATAGTAATTGATTTTTAATTACAGTTATCTTAATTGTTTAAAAAAAATGATTTTTATCACAAAAGACATTTGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGCCTGCAACCACTAACCCACCAATAGAGGGGCAGATAGGGCGTTAATCTCCCATCCTTAACCTGGTTTATGGAAAATTGCCATCCATTCTCTTTAATTTGTAGATGATACGTTCtaaaaaacccc                                                                                                                                                                                                                                         >  2:351044‑M1/1‑240 (MQ=255)
     aaTTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAAATGGCACGTAGGGTTTGCAAACACTAACCCAACAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATAGCACTCCATTCTGTTTAGTTTGTAGATGATACGTTCtaaaaaaaccccgac                                                                                                                                                                                                                                     >  1:147196‑M1/1‑235 (MQ=255)
     aaTTAACAGTGCAATAGTAAATGATAGTTCATTACAGTTAACTTACTTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGAAGATATGGCGTTAATCTCCCATACTTAAACTGGTTTATGGTAAATTGCCATCAATTATGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgac                                                                                                                                                                                                                                     >  2:574244‑M1/1‑235 (MQ=255)
         aaCAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttg                                                                                                                                                                                                                                >  2:129602‑M1/1‑231 (MQ=255)
           cAGTGCAATAGTAGATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacctttgcc                                                                                                                                                                                                                              >  2:328037‑M1/1‑229 (MQ=255)
              tGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGCAATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGTTGATACGTTCtaaaaaaaccccgacatttgccggg                                                                                                                                                                                                                           >  2:218226‑M1/1‑226 (MQ=255)
                 aaTAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggtt                                                                                                                                                                                                                        >  2:348374‑M1/1‑223 (MQ=255)
                         aTGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTATTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGATTGCAACCACTAACCCACCAATAGAGGGGAAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcat                                                                                                                                                                                                                >  1:460898‑M1/1‑215 (MQ=255)
                            aTTGTTAATTACAGTTATCTTAATTGTTTCAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataac                                                                                                                                                                                                             >  2:337287‑M1/1‑212 (MQ=255)
                               gTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgt                                                                                                                                                                                                           <  2:304532‑M1/250‑42 (MQ=255)
                                ttAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgta                                                                                                                                                                                                          >  1:247284‑M1/1‑208 (MQ=255)
                                ttAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgta                                                                                                                                                                                                          >  2:407945‑M1/1‑208 (MQ=255)
                                  aaTTACAGTTATCTTAATTGTTTAAAAAAAGGGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatg                                                                                                                                                                                                       >  1:573249‑M1/1‑206 (MQ=255)
                                      aCAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGTCACGTAGGGTTTGCAACCACTAACCCACCAAGAGAGGGGAAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaacaaaccccgacatttgccggggttgtgagcataccgtaatgcttt                                                                                                                                                                                                   >  2:298335‑M1/1‑202 (MQ=255)
                                        aGTTATCTTAATTGTTTAAAAAAAGGGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACCTAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttatt                                                                                                                                                                                                 >  2:546541‑M1/1‑200 (MQ=255)
                                            aTCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttatttta                                                                                                                                                                                              <  1:158482‑M1/250‑55 (MQ=255)
                                                 aaTTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggac                                                                                                                                                                                        <  1:531940‑M1/251‑61 (MQ=255)
                                                         aaaaaaaGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgcc                                                                                                                                                                                <  1:302312‑M1/251‑69 (MQ=255)
                                                         aaaaaaaGTGATTTTGATCACAAAGGAAATNTGCCTGAGCAGCAGTCAGAGACATAACTTGCATGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCACATACTTAACCTGGTTTATGGTAAAGTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgc                                                                                                                                                                                 <  2:254154‑M1/250‑68 (MQ=255)
                                                               aGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaac                                                                                                                                                                          >  2:245560‑M1/1‑177 (MQ=255)
                                                                     ttttATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTGGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTGGTAGATGATACGTTCtaaaaaaaccccgacatgtgccggggttgggagcataacggaatgcttattttaccggacgcatcgccgagaacagaat                                                                                                                                                                     <  2:151537‑M1/250‑80 (MQ=255)
                                                                      tttATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaata                                                                                                                                                                    >  1:138005‑M1/1‑170 (MQ=255)
                                                                          tCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtc                                                                                                                                                               >  1:468811‑M1/1‑166 (MQ=255)
                                                                           cacaAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcg                                                                                                                                                              >  1:377806‑M1/1‑165 (MQ=255)
                                                                                aGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggat                                                                                                                                                         >  1:461611‑M1/1‑160 (MQ=255)
                                                                                  gAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatgg                                                                                                                                                       >  1:249261‑M1/1‑158 (MQ=255)
                                                                                     atatGCCTGAGCAGCAGTCAGAGACATAGCTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtat                                                                                                                                                    <  1:374582‑M1/251‑97 (MQ=255)
                                                                                     atatGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaacccagacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatctccgggaacagcatcacgtcgcggctggtat                                                                                                                                                    >  2:9319‑M1/1‑155 (MQ=255)
                                                                                       atGCCTGAGCTGCAGTAAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCAGCAATAGAGGGGTATATAGGGCGTTAATCGCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATGCTGTTTAATTTGGAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtata                                                                                                                                                   <  2:362424‑M1/250‑98 (MQ=255)
                                                                                       atGCCTGAGCAGCAGTCAGAGACATAACAGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgccattttccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccggaaacagaataccttcgcggttcgtatgg                                                                                                                                                  >  2:385194‑M1/1‑153 (MQ=255)
                                                                                         gCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTATCCTGGTTTATGGTAAATTGCCCTCCATCCGGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccgggggtgtgagaataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggct                                                                                                                                                <  1:559324‑M1/251‑101 (MQ=255)
                                                                                              agcagcAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCta                                                                                                                                                                                                                                                  <  2:429262‑M1/148‑3 (MQ=255)
                                                                                              agcagcAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCta                                                                                                                                                                                                                                                  >  1:429262‑M1/1‑146 (MQ=255)
                                                                                                  gcagTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgc                                                                                                                                        >  1:475774‑M1/1‑142 (MQ=255)
                                                                                                    agTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGTTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaaca                                                                                                                                     <  1:564669‑M1/251‑112 (MQ=255)
                                                                                                     gTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaatccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacag                                                                                                                                    <  2:105661‑M1/251‑113 (MQ=255)
                                                                                                            aCATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattacc                                                                                                                             <  2:43528‑M1/251‑120 (MQ=255)
                                                                                                                         gtagggtttgCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaagaacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgatac                                                                                                                <  1:372279‑M1/247‑133 (MQ=255)
                                                                                                                                           aaCCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgacaccaattcccagacctgc                                                                                                <  2:487123‑M1/249‑149 (MQ=255)
                                                                                                                                            aCCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgt                                                                                             >  1:239613‑M1/1‑100 (MQ=255)
                                                                                                                                                     tAGAGGGGGAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGGAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgccatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgtttgtgaaccacattacaatacgttcgatcccaattcccagacctgctgcaggcggta                                                                                     >  2:48462‑M1/1‑91 (MQ=255)
                                                                                                                                                         ggggTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagcca                                                                                <  1:496966‑M1/251‑165 (MQ=255)
                                                                                                                                                                aTAGTGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggggaacagcattaccatacggtcggaaacaattcccagaccttctatcggcggtaatgcatgtttc                                                                          >  2:430954‑M1/1‑80 (MQ=255)
                                                                                                                                                                       gTTAATTTCCCATACGTAACCTGTGTTATGGTAAATTGCCCTCCATGCTGTTTAATTGGTATATGATACGTTCtaaaaaaaccccgaacttggccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtgtggctgtgggtgaacagcatgaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggt                                                                  <  2:447945‑M1/251‑179 (MQ=255)
                                                                                                                                                                         tAATCTCCCATCCTTAACCTGGGTTATGGTAAATTGCCCTCCATTCTTGTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacagttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtg                                                                 <  2:506814‑M1/250‑180 (MQ=255)
                                                                                                                                                                            tctcCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtnggcggtaagccatgttccagtgcggtgacgg                                                             >  2:289717‑M1/1‑68 (MQ=255)
                                                                                                                                                                               cccATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgcgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggaatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgccgggggtaagcccggttccagtgcggcgacgcaat                                                          >  1:248330‑M1/1‑65 (MQ=255)
                                                                                                                                                                                    gctTAGCCTGTTTTATGGTAAATTGCCCCCCATTCTGTTGAATGTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatctccgggaacagaataacggcgcggatggtatggctgttggtgatcagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttc                                                      <  2:192499‑M1/249‑191 (MQ=255)
                                                                                                                                                                                             ggTTTATGGTAAATTGCCCGCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgccgtcggcggtaagccatgttccagtgcggtgacgtaatcttcctcgtagaac                                            >  2:418762‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                          ttGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgt                               >  1:471738‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                            gCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtca                             <  2:214978‑M1/251‑216 (MQ=255)
                                                                                                                                                                                                             cccTCCATTCTGTTTTATTTGTGGATGATTCGTTCtaaaaaaaccccgccagttgccggtgttgtgagcataacgtaatgcttattttgccggacgcatcgccgggaacagaataacgtctcggatggtatggctggtggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcttcgtca                             <  2:581292‑M1/250‑216 (MQ=255)
                                                                                                                                                                                                               cTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcaccc                          >  1:507255‑M1/1‑33 (MQ=255)
                                                                                                                                                                                                                         gTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcacctgcgtct                    <  1:60864‑M1/248‑225 (MQ=255)
                                                                                                                                                                                                                                ttGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcacctgcgtctttcgcggca           >  1:40361‑M1/1‑17 (MQ=255)
                                                                                                                                                                                                                                 tGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccctgttccagtgcggggacgtaatcttcatcggagaacatcnctttgtcgtcacctgcggctttcgcggccac         >  2:284655‑M1/1‑16 (MQ=255)
                                                                                                                                                                                                                                  gTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcacctgcgtctttcgcggcaacc        >  1:56498‑M1/1‑15 (MQ=255)
                                                                                                                                                                                                                                    aGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcacctgcgtctttcgcggcaacct       <  1:245560‑M1/250‑238 (MQ=255)
                                                                                                                                                                                                                                        gatACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcacctgcgtctttcgcggcaacctgatcc  >  1:463414‑M1/1‑9 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                  
GCACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAAGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTTTGTTTAATTTGTAGATGATACGTTCAGATAATGTCTAATATTTGGTCTAAAGAAGAAACTCTGTGGAGTTTCGCGCTCTACGGCACAGCCGTTGGTGCAGGCACGCTCTTCCTTCCTATTCAGTTAGGTTCGGCAGGGGCTGTGGTCCTGTTTATTACTGCTCTGGTCGCCTGGCCTTTAACATATTGGCCACATAAAGCCTTGTGCCAGTTCATCCTCTCATCAAAAACATCAGCAGGTGAAGGGATAACGGGCGCGGTAACACAC  >  NC_000913/2985602‑2986083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: