| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,143,266 | Δ40,395 bp | [dgcE]–yegX | 38 genes [dgcE], alkA, yegD, yegI, yegJ, pphC, yegL, sibA, ibsA, sibB, ibsB, mdtA, mdtB, mdtC, mdtD, baeS, baeR, yegP, trhP, cyaR, ogrK, yegR, yegS, gatR, insE5, insF5, gatR, gatD, gatB, gatA, gatZ, gatY, fbaB, yegT, yegU, yegV, yegW, yegX |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2143266 | 2183660 | 40395 | 80 [0] | [0] 80 | [dgcE]–yegX | [dgcE],alkA,yegD,yegI,yegJ,pphC,yegL,sibA,ibsA,sibB,ibsB,mdtA,mdtB,mdtC,mdtD,baeS,baeR,yegP,trhP,cyaR,ogrK,yegR,yegS,gatR,insE5,insF5,gatR,gatD,gatB,gatA,gatZ,gatY,fbaB,yegT,yegU,yegV,yegW,yegX |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2143265 | 0 (0.000) | 80 (1.100) | 68/492 | 0.0 | 100% | intergenic (‑317/‑1) | udk/dgcE | uridine/cytidine kinase/putative diguanylate cyclase DgcE |
| ? | NC_000913 | 2183661 = | 0 (0.000) | intergenic (‑10/+55) | yegX/thiD | putative glycosyl hydrolase YegX/bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | |||||
GGGATTTCATCCGTCTGATACCAGTCGAATAGCGTTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAATGAGCAAACAATCACAGCATGTATTAATTGCCCTGCCCCACCCGCTGCTTCACCTGGTCAGTTTAGGTTTAGTCTCGTTTATCTTTACCCTTTTCTCGCTTGAGCTTTCGCAGTTTGGCACCCAACTCGCCCCACTGTGGTTCCCGACGTCCATCATGATGGTGGCGTTTTATCGCCATGCCGGGCGCATGTGGCCGGGAATTGCGCTGAGCTGTTCGCTGGGAAATATCGCCGCATCCATCCTGC > NC_000913/2143017‑2143512 | gggATTTCATCCGTCTGATACCAGTCGAATAGCGTTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAcc > 2:32992‑M1/1‑249 (MQ=255) ggATTTCATCCGTCTTATACCAGTCGAATAGCGTGGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTGTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCTGATACAGCGGTAccc < 2:21421‑M1/251‑4 (MQ=255) gATTTCATCCGTCTGATACCAGTCGAATAGCGTTGCCGCGCGGTCAGAGTTAATTGTTGACCAAGAATTCCCGGAGTCAAATTACGTTGATCAGTTATATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTCTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTGTTGTACTAGCATAAACACAGAAACGAAGATGGGCGACCGGGTCGTTCGGATAAAGCGGTTccct < 1:173659‑M1/251‑5 (MQ=255) aTTTCATCCGTCTGATACCAGTCGAATAGCGTTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATCAAGCGGTAccctg > 2:95759‑M1/1‑246 (MQ=255) cGTCTGATACCAGTCGAATAGCGTTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtc > 1:281588‑M1/1‑238 (MQ=255) tatACCAGTCGAATAGCGGTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGTGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACGTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgc < 2:202784‑M1/248‑17 (MQ=255) gATACCAGTCGAATAGCGTTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgcc < 1:95759‑M1/250‑18 (MQ=255) aGTCGAATAGCGTTGCCGCGCGCTCAGAGTTAATTGGTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggct < 2:107409‑M1/251‑25 (MQ=255) gAATAGCGTTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgac > 1:154361‑M1/1‑223 (MQ=255) aaTAGCGTTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGAATAAAGCGGTAccctgaatgtcagtgccaaaggctgaca > 1:277367‑M1/1‑222 (MQ=255) aGCGTTGTCGTGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACTTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACATTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAtcctgaatgtcagtgccaaaggctgacaataa < 2:245643‑M1/251‑33 (MQ=255) aGCGTTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTGTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataa < 2:484242‑M1/251‑33 (MQ=255) tGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaa > 1:179386‑M1/1‑214 (MQ=255) cgcgcgCTCAGAGATAATTGTTGACAAAGTATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACACAGTTGCGCAACTTATCCGCCTTTACGTCACTTTATGAGAAATTCGCATATAAAATGAAAAACTTTTGTACTAGCATAAACACAGAAACGAATCCTGGCGACCAGGGCTTGCGGCGAAAGCGGTAccctgaataccattgacacaggctgacaatacccaaacc > 2:491101‑M1/1‑211 (MQ=255) cgcgcTCAGCGTGAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGCAAACAATGGTAAACGCAGTTGCGCAAATTACCAGCCTTTACGTCACTTTATGATCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTTGCGCCCAGATCTTGCGGAGAAAGCGGCAccctgaatgtaagtgccaaaggctgacaaacaccacaaccgc > 2:492460‑M1/1‑209 (MQ=255) cgcgcTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataacaaaagcagc > 2:108581‑M1/1‑209 (MQ=255) gagTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtac > 1:313495‑M1/1‑201 (MQ=255) ttAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggt > 1:216636‑M1/1‑198 (MQ=255) ttgttgACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctc > 1:12628‑M1/1‑194 (MQ=255) aaaGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCACTTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatcgtacggtgctcaccacc > 2:561930‑M1/1‑186 (MQ=255) aaGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgcacaccacaagg > 2:1221‑M1/1‑185 (MQ=255) cccGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtgga > 2:57551‑M1/1‑178 (MQ=255) cccGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagaagctatagtacggtgctcaccaccaggcgtgga > 1:96609‑M1/1‑178 (MQ=255) cGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAAGTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtactgtgctaaccaccaggcgtggaagt < 2:480028‑M1/251‑76 (MQ=255) ggggCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctctagtacggtgctcaccaccaggcgtggaagtgg > 1:413847‑M1/1‑174 (MQ=255) gTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggacc > 1:441884‑M1/1‑162 (MQ=255) gATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaat > 1:378489‑M1/1‑159 (MQ=255) tttATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgac > 1:279814‑M1/1‑152 (MQ=255) tGTAAGGTAAACAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTAACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGACTACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggagaaccggaccaataccgtgaccaac > 1:554146‑M1/1‑148 (MQ=255) tGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaac > 1:406000‑M1/1‑148 (MQ=255) gTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaact > 1:34569‑M1/1‑147 (MQ=255) ggTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttcc > 1:58262‑M1/1‑143 (MQ=255) aaaaaaTGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggacaaataccgttaccaacttccagcg > 2:232272‑M1/1‑140 (MQ=255) aaTGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTAGGAGCAATTCGCATATAAAATGTAAATCTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaagtctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaatcccgtgaccaccttccagcgtttc < 2:420261‑M1/251‑116 (MQ=255) aTGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcg < 1:1221‑M1/251‑117 (MQ=255) gTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggc > 1:407168‑M1/1‑133 (MQ=255) gTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggc > 1:198710‑M1/1‑133 (MQ=255) tGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgc > 1:189064‑M1/1‑121 (MQ=255) tGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcg > 2:516763‑M1/1‑121 (MQ=255) tGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcg < 1:516763‑M1/232‑112 (MQ=255) cAAATTATCCGCCTTTTCGTCACTTTATGAGCAATTCGCATATAAAAGGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGGCCAGGTCTTGCGGATAAAGCTGTTccctgaatgtcattgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgat < 1:551960‑M1/251‑135 (MQ=255) aaaTTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatg > 1:268821‑M1/1‑116 (MQ=255) ttACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTGTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacgtccagcgtgtcggcctgggctaacgccgatgaaagccagcttt < 2:313495‑M1/250‑148 (MQ=255) aCGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAGCACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcacccccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagcttttt < 2:174635‑M1/250‑150 (MQ=255) ggcacTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgcaaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcc > 2:535121‑M1/3‑99 (MQ=255) aTGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgccagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtac > 2:11582‑M1/1‑91 (MQ=255) aGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggt > 1:436466‑M1/1‑88 (MQ=255) aaTTCGCATATAAAATGTAAAACTTTTGTGCTAGCATAAACACAGAAACGAATACTGGCGACCCGGTGTTGCGGATAAAGCGGGAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaggtggtgaaccggagcaataccgtgaccaacttcctgcgtgtcggcctgggctaacgccgatgaaagccagctttgttcctcctgtagggtgtc < 2:446843‑M1/251‑167 (MQ=255) aaTTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtc < 1:113861‑M1/251‑167 (MQ=255) aaTTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgacggcctgggctaaagccgatgaaagccagctttttgcctcctgtacggggtc > 2:212071‑M1/1‑85 (MQ=255) cGCATATAAAATGGAAAACTTTTGTACTAGCATACCCACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGAGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgagaccaacttccagcgtgtcggcctcggctaacgccgatgaaagccagctttttgcctcctggacggggtcagcc > 2:205862‑M1/1‑81 (MQ=255) atatAAACTGTAAAACTTATGGACTAGCATAAACACAGAAACGCATACTAGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggcgcacaccaccaggcgtggaagtggggaaccggaccactaccgtacccaacttccagcgagtaggcctgtgctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagccccg > 2:306950‑M1/1‑78 (MQ=255) atatAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccag < 1:424004‑M1/251‑174 (MQ=255) aaTGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACAAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgt > 1:309763‑M1/1‑72 (MQ=255) gTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACAAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaatcccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgcacggtgtcagcccaggttgtatgg > 2:243240‑M1/1‑69 (MQ=255) aaaCTTTTGTACTAGCATAAACACAGAAACGAATACTGGAGACCAGGTCTTGCGGCTAAAGCGGAAccctgaatgtcagtgccaaaggcagacaataaccaaagcagctatagtacggtgctcaccaccaggcgagaaagtgggaacccgtaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagcttttttcctcctgtccggtgtcagcccagtttgtatggctc > 2:474601‑M1/1‑66 (MQ=255) tttGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggc < 1:400221‑M1/250‑190 (MQ=255) tGTACTAGCATAAACACAGCAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgt > 1:407967‑M1/1‑59 (MQ=255) gTACTAGCATAAACACAGAAACGAATACTGGCGCCCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgt > 2:171967‑M1/1‑58 (MQ=255) gTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccacagccgctatagtacggtgctcaccaccaggcgtggaagtggggaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgt > 1:362678‑M1/1‑58 (MQ=255) aCTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagt < 1:32992‑M1/250‑195 (MQ=255) tAGCATAAACACACAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtnagccaagtttgtatggcgcgggcggagtgcc > 2:262360‑M1/1‑54 (MQ=255) aaCACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagccccntttgtatggcgcgggcgtagtgcagccaacg > 2:267465‑M1/1‑47 (MQ=255) acacAGAAACGAATACTGGCGACCAGGGCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgc < 2:407168‑M1/251‑206 (MQ=255) aaCGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcag > 1:11026‑M1/1‑39 (MQ=255) aaTACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcagagagtg > 1:118204‑M1/1‑35 (MQ=255) aTACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggcttacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaac < 2:229938‑M1/237‑204 (MQ=255) aTACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggactgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaac > 1:229938‑M1/1‑34 (MQ=255) tACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaacggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggactgggctaacgccgatgaaagacagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcagagactgt > 1:388079‑M1/1‑33 (MQ=255) tACTGGCGACCAGGTCTTGCGGATAAAGCGGTAccatgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgagtcggcctgggctaacgccgatgaaagccagctttttgcctccggtacggtggcagcccagtttgaatggcgcgggcgtagtgcagccaacgccgcagcgagtgt > 2:518361‑M1/1‑33 (MQ=255) aCTGGCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcagagagtgtac < 1:517359‑M1/251‑220 (MQ=255) ggCGACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcagagagtgtaca < 2:155724‑M1/249‑221 (MQ=255) gACCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcagagagtgtacaacc > 1:415683‑M1/1‑26 (MQ=255) aCCAGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcagagagtgtacaaccagt > 2:367014‑M1/1‑25 (MQ=255) cggtCTTGCAGATAAAGCGGTTccctgaatgtcagtgcaaaaggctgacaataaccaaagcagctatagtacggtgctcacccccaggcgtggaagttgtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctggacggtgtcagcccaggttgtatggcgcggtcgtagtgcagccatcgccgcagagagtgtacaaccagtgct < 2:362678‑M1/250‑230 (MQ=255) aGGTCTTGCGGATAAAGCGGTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcagagagtgtacaaccagtgcc < 1:108581‑M1/251‑230 (MQ=255) cGGATAAAGCGGTAccctgaacgtcagtgccaaaggctgacaataaccacagcagctatattacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgacaaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcctagtttgtatggagcgggcgtagtgcagccaacgccgcagttagtgtacaaccagtgccgtgggtgt < 2:345350‑M1/251‑238 (MQ=255) aaaGCGGTAccctgaatgtaagtgccaaaggctgacaatcacccaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagcttattgcctactgtacggcgtccgcccagtttgaatggcgcgggcggcgtgcagccaacgccgcagagcgtggacaaccagagccgtgggtgtttttg > 2:230140‑M1/1‑9 (MQ=255) ggTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcagagagtgtacaaccagtgccgtgggtgtttttggtcat > 1:209790‑M1/1‑4 (MQ=255) gTAccctgaatgtcagtgccaaaggctgacaataaccaaagcagctatagtacggtgctcaccaccaggcgtggaagtggtgaaccggaccaataccgtgaccaacttccagcgtgtcggcctgggctaacgccgatgaaagccagctttttgcctcctgtacggtgtcagcccagtttgtatggcgcgggcgtagtgcagccaacgccgcagagagtgtccaaccagtgccgtgggtgtttttggtcat > 1:560778‑M1/1‑3 (MQ=255) | GGGATTTCATCCGTCTGATACCAGTCGAATAGCGTTGCCGCGCGCTCAGAGTTAATTGTTGACAAAGAATTCCCGGGGGCAAATTACGTTGATCAGTTTTATGTAAGGTAAAAAATGTTAAACGCAGTTGCGCAAATTATCCGCCTTTACGTCACTTTATGAGCAATTCGCATATAAAATGTAAAACTTTTGTACTAGCATAAACACAGAAACGAATACTGGCGACCAGGTCTTGCGGATAAAGCGGTAATGAGCAAACAATCACAGCATGTATTAATTGCCCTGCCCCACCCGCTGCTTCACCTGGTCAGTTTAGGTTTAGTCTCGTTTATCTTTACCCTTTTCTCGCTTGAGCTTTCGCAGTTTGGCACCCAACTCGCCCCACTGTGGTTCCCGACGTCCATCATGATGGTGGCGTTTTATCGCCATGCCGGGCGCATGTGGCCGGGAATTGCGCTGAGCTGTTCGCTGGGAAATATCGCCGCATCCATCCTGC > NC_000913/2143017‑2143512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |