Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,066,152 Δ12,778 bp insH6[yoeF] insH6, yoeA, insD3, insC3, yoeA, isrC, flu, yeeR, yeeS, yeeT, cbeA, cbtA, yeeW, [yoeF]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2066152 2078929 12778 48 [0] [0] 47 insH6–[yoeF] insH6,yoeA,insD3,insC3,yoeA,isrC,flu,yeeR,yeeS,yeeT,cbeA,cbtA,yeeW,[yoeF]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20661510 (0.000)47 (0.650) 44/490 0.3 100% intergenic (‑387/+154) cobU/insH6 cobinamide‑P guanylyltransferase/cobinamide kinase/IS5 family transposase and trans‑activator
?NC_000913 2078930 = 0 (0.000)coding (356/357 nt) yoeF putative uncharacterized protein YoeF

CGAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATGCACTAGGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCA  >  NC_000913/2065901‑2066399
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                        
cGAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTAt                                                                                                                                                                                                                                                          <  1:535727/251‑1 (MQ=255)
       aGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcg                                                                                                                                                                                                                                                   <  1:484868‑M1/251‑8 (MQ=255)
           ggCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattg                                                                                                                                                                                                                                               >  1:179493‑M1/1‑240 (MQ=255)
           ggCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgatt                                                                                                                                                                                                                                                <  2:88765‑M1/250‑11 (MQ=255)
                 aCGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaagttcgattggttctc                                                                                                                                                                                                                                         <  2:91810‑M1/251‑18 (MQ=255)
                            aGACTTTCTCGTGTTAACGTCCGACAAAATGCGGCATTGACAGCGGTTTCTGTGGATTGACTCATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatg                                                                                                                                                                                                                              <  1:474275‑M1/251‑29 (MQ=255)
                                                     aaaaTGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaat                                                                                                                                                                                                     <  1:429953‑M1/251‑54 (MQ=255)
                                                     aaaaTACGTAATAGACAGCGGTTTCTGTGGATTGACACATTTCATCCAGATAATGCATTAATGCTACTGCCGAAACAACCAGCCATCGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAACGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTCTaatttcgattggttctcggctgaggatgatgacggtgatacacagataagaat                                                                                                                                                                                                     >  2:332166‑M1/1‑198 (MQ=255)
                                                                     aGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgaggg                                                                                                                                                                                     <  1:92074‑M1/251‑70 (MQ=255)
                                                                             cTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccggg                                                                                                                                                                             >  1:189120‑M1/1‑174 (MQ=255)
                                                                                 ggATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaac                                                                                                                                                                         >  1:50715‑M1/1‑170 (MQ=255)
                                                                                     tGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctc                                                                                                                                                                     >  1:414747‑M1/1‑166 (MQ=255)
                                                                                       aaacagttaattcagaataggaattaatgctactgccggatCTACCAGCAATCGGGCATTGTGTTCTGAAATCCAGGCTATTGATTTATCGTCATCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAATGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggggatacacagataagaagcaatgagcaatgagggttgccgggcaaccctcat                                                                                                                                                                   <  2:133953‑M1/231‑88 (MQ=255)
                                                                                         acaTTTCACTCAGATAATGACTTAACGCTACTGCCGGCACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGAGACTATaatttcgattggttctcggatgaggatgatgacggtgatacaacgataagaatcaatgagcaatgagggttgccgggcaaccctcattg                                                                                                                                                                 >  1:404179‑M1/1‑162 (MQ=255)
                                                                                                attcaGATAATGAATTAATGCTACGGCCGGAACAACCAGCAAACGGGGATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggtaaccctcattgaataaaa                                                                                                                                                          <  2:488993‑M1/251‑97 (MQ=255)
                                                                                                   caGATAATGAATTATTGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGAGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgg                                                                                                                                                       >  1:181683‑M1/1‑152 (MQ=255)
                                                                                                   caGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTCTTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGAAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgg                                                                                                                                                       >  1:522258‑M1/1‑152 (MQ=255)
                                                                                                      aTAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTGTTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacggga                                                                                                                                                     >  1:88895‑M1/1‑149 (MQ=255)
                                                                                                               tAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcg                                                                                                                                            <  1:414706‑M1/250‑111 (MQ=255)
                                                                                                               tAATGCTACGGTCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgatcaatgagggttgccgggcaaccctcattgaagaaaacgggaattgcttcc                                                                                                                                            <  2:178741‑M1/250‑111 (MQ=255)
                                                                                                                 aTGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCGGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGAACTAGAATTATCCGGAATGGTGGCGACTATaatttcgattggctctcggatgaggatgatgacggtgatacaaagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgctt                                                                                                                                         >  1:540053‑M1/1‑138 (MQ=255)
                                                                                                                       cTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgt                                                                                                                                   >  1:352455‑M1/1‑132 (MQ=255)
                                                                                                                                caacCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcattt                                                                                                                          <  1:307902‑M1/251‑129 (MQ=255)
                                                                                                                                 aacCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttc                                                                                                                         >  1:152982‑M1/1‑122 (MQ=255)
                                                                                                                                 aacCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttc                                                                                                                         <  1:542090‑M1/251‑130 (MQ=255)
                                                                                                                                          aCGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagc                                                                                                                <  1:181877‑M1/251‑139 (MQ=255)
                                                                                                                                           cGGGCATTGTGTTCTGAAATCCAGGCTATTGATTTAACGTCAGCCACAGAGATGCGCTGTTAAAGAACTTGTAAAACAACGTAAGAGAATGATCCGGAATGGTGGCGACAATaatttctattggttctcggatgaggatggtgacggtgatactcagataagaatcaatgagcaatgagggttgccggtcaaccctcattgaataaaacgagaattacttcgcttcgccgtttgtcatttcgcccatagtt                                                                                                               <  2:305720‑M1/251‑140 (MQ=255)
                                                                                                                                           cGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagct                                                                                                               <  1:154905‑M1/251‑140 (MQ=255)
                                                                                                                                           cGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaatcacttcgcttcgccgtttttcatttcgcccatagct                                                                                                               >  2:527649‑M1/1‑112 (MQ=255)
                                                                                                                                             ggCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGAGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagcttt                                                                                                             >  2:563365‑M1/1‑110 (MQ=255)
                                                                                                                                                            aaTCCAGGCTATTGATTCAACGTCAACGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACATAATAGAATTATCCGGAGTGATGGCGAATATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgaacaataaggggtgccgggcaaccctcattgaataaaacgtgaattgcttcgcttctccgtttttcatttcgcccatagctttcagctttttgg                                                                                                  >  1:441128‑M1/1‑95 (MQ=255)
                                                                                                                                                               ccAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatc                                                                                           <  2:50715‑M1/251‑160 (MQ=255)
                                                                                                                                                                 aGGCTATTGATTCAACGTCAGTGACAGATCTGCGCTGTAAAAGAACCTGTAAATCAACGTAATAGAATTATCCGGAATGGTGGCGGCTATaatttcgattggttctcggatgaggatggttacggtgatactcagataagaatcaatgagcaatgagggttgccgtgcaaccctcattgaataaatctggaattacttcgcttcgccttttttcatttcgcccatatctttcagctttttggagatatcgc                                                                                         <  1:297444‑M1/251‑162 (MQ=255)
                                                                                                                                                                        tGATTCAACGTCATCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAAGTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccggttttcatttcgcccatagctttcagctttttggagatatcgcggcgtt                                                                                   <  2:529952‑M1/250‑168 (MQ=255)
                                                                                                                                                                             cAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttgg                                                                             <  1:468945‑M1/251‑174 (MQ=255)
                                                                                                                                                                                cGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTAACCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggaga                                                                          <  1:270329‑M1/251‑177 (MQ=255)
                                                                                                                                                                                 gTCAGCGACAGATCTGCACTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacccagataagaataaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggag                                                                           >  2:234555‑M1/1‑74 (MQ=255)
                                                                                                                                                                                        aCAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggngatatcgcggcgttctttggagagctcggcc                                                                  >  2:286118‑M1/1‑67 (MQ=255)
                                                                                                                                                                                            aTCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggcgagctcggcatttt                                                              >  2:423525‑M1/1‑63 (MQ=255)
                                                                                                                                                                                                      tAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggagttacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgt                                                     >  2:428593‑M1/1‑53 (MQ=255)
                                                                                                                                                                                                       aaaaGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggcattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgta                                                    >  2:129367‑M1/1‑52 (MQ=255)
                                                                                                                                                                                                              cTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggcgagctcggcatttttgatgatgtaatcgtca                                             >  2:82845‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                                    aaaCAACGTAATAGAATTATCCGGAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttatttggagagctcggcatttttgatgatgtaatcgtcaacgcgat                                      >  2:17007‑M1/1‑39 (MQ=255)
                                                                                                                                                                                                                                           gAATGGTGGCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttcgttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctttcatgctg               <  1:234843‑M1/251‑236 (MQ=255)
                                                                                                                                                                                                                                                 tggCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgggggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcggtctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctttcatgctggcg            <  2:36331‑M1/248‑239 (MQ=255)
                                                                                                                                                                                                                                                 tggCGACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgctgatgtaatcgtcaacgcgatcttcatagtcacctttcatgctggcg            >  1:36331‑M1/1‑10 (MQ=255)
                                                                                                                                                                                                                                                     gACTATaatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcggcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctttcatgctggcgatgatgc     >  1:416164‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                                         ataatttcgattggttctcggatgaggatgatgacggtgatacacagataagaatcaatgagcaatgagggttgccgggcaaccctcattgaataaaacgggaattacttcgcttcgccgtttttcatttcgcccatagctttcagctttttggagatatcgcggcgttctttggagagctcgtcatttttgatgatgtaatcgtcaacgcgatcttcatagtcacctttcatgctggcgatgatgccct  <  1:234555‑M1/250‑249 (MQ=255)
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CGAAATAAGATGGCATTACGGAATAGCCAGACTTTCTCGTGTTAACGTCCGACAAAATGCGTCATTGACAGCGGTTTCTGTGGATTGACACATTTCATTCAGATAATGAATTAATGCTACTGCCGGAACAACCAGCAAACGGGCATTGTGTTCTGAAATCCAGGCTATTGATTCAACGTCAGCGACAGATCTGCGCTGTAAAAGAACTTGTAAAACAACGTAATAGAATTATCCGGAATGGTGGCGACTATGCACTAGGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCA  >  NC_000913/2065901‑2066399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: