Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,060,444 Δ19,761 bp yihLyiiF 19 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4060444 4080204 19761 69 [0] [0] 71 yihL–yiiF yihL,yihM,yihN,ompL,yihO,yihP,yihQ,yihR,yihS,yihT,yihU,yihV,csqR,yihX,yihY,dtd,fabY,yiiE,yiiF

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40604430 (0.000)69 (0.950) 64/490 0.0 100% intergenic (+213/‑4) bipA/yihL 50S ribosomal subunit assembly factor BipA/putative DNA‑binding transcriptional regulator YihL
?NC_000913 4080205 = 0 (0.000)intergenic (+236/+94) yiiF/fdhE protein YiiF/formate dehydrogenase formation protein

TCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAACAATGGCGGAGAATCAATCCACCGTAGAAAATGCAAAAGAGAAACTGGATCGGTGGTTGAAAGATGGCATCACCACGCCGGGTGGAAAACTCCCTTCAGAAAGAGAGCTGGGAGAACTGCTGGGCATTAAACGTATGACGCTGCGCCAGGCGTTGTTGAACCTCGAGGCAGAATCCAAAATCTTCCGTAAGGATCGTAAGGGGTGGTTCGTGACCCAGCCGCGATTTAATTACAGTCCGGAGC  >  NC_000913/4060197‑4060687
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                    
gcgccgcgCCAACCGCGCCCCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgctt                                                                                                                                                                                                                                                  <  2:103052‑M1/250‑5 (MQ=255)
            cccggaacacgaagccgtttaatttcgttttgtagtcaTAAAAACCCCGCCAGCTATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTAGTTACGTCAATAGAGAGCTTTGTCACAATTAGCTGCAAAGTCATCCGCCTTTAATTGCTTTCTTTTTTGGTGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATGAAgcttgcggtggtaac                                                                                                                                                                                                                                       <  2:247558‑M1/232‑16 (MQ=255)
                aatttagccaactaggtgcgccgttttttagncaaaaaaaaccTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcgga                                                                                                                                                                                                                                  <  2:287035‑M1/230‑21 (MQ=255)
                  aCCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaat                                                                                                                                                                                                                                >  2:514647‑M1/1‑229 (MQ=255)
                       aaGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacg                                                                                                                                                                                                                             >  1:534275‑M1/1‑224 (MQ=255)
                            gATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCGGCAATGGCAGGTTTTTTTTTGCCGGTCGTGAGCGCACACCAATGAGAGTATCTCCCTTATCGGTCTGGGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCAGTTAAGTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTAAAACCAAAAGGATTAAgcttgcggtggtaacgcgaatacgaagaat                                                                                                                                                                                                                        >  1:575782‑M1/1‑219 (MQ=255)
                                      gTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcac                                                                                                                                                                                                            >  1:172636‑M1/1‑209 (MQ=255)
                                      gTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcac                                                                                                                                                                                                            <  1:519507‑M1/251‑43 (MQ=255)
                                          tttAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccc                                                                                                                                                                                                        >  1:531620‑M1/1‑205 (MQ=255)
                                             aGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgacgtcacaccctat                                                                                                                                                                                                     >  2:106114‑M1/1‑202 (MQ=255)
                                              gTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatg                                                                                                                                                                                                    >  1:285332‑M1/1‑201 (MQ=255)
                                                cATAAAAAACCTGCCAGCGATGGCCGGTTTTTTTTGGCTGTCGTGAGCGCACACCCAAGGGAGGAACTCCCTTAAAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGGCATAAGACGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaaagcggaatacgagagatggtggcgtcaaaccctatgagc                                                                                                                                                                                                 >  1:481496‑M1/1‑198 (MQ=255)
                                                        aCCTGCCAGCGATGGCAGGATTTTTTTTGCCTGTCGTGAGTGCACACCAATGCGAGTATCTCCTTTTTAAGTTTGTGGTTAAGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTATTTGGAGTAAGAGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtgctaacgcggaatacgagagatggtgacgtcacaccctctgagccgtaatc                                                                                                                                                                                          >  2:334093‑M1/1‑191 (MQ=255)
                                                         ccTGCCAGCGCTGGCAGGTTTTTTTTTTCCTGTCGTGAGCGAACACCAATGCGAGTATCTCCCTTCTAAATCTGTGGTCACGTCAATACAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGATAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtcacgcggtataccagaantggtgtcgtcacacccaattagccgtaatcc                                                                                                                                                                                         >  2:259513‑M1/1‑190 (MQ=255)
                                                           tGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGAACACCAATGCGAGTATATCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTAACAATTCTCTGCAAAGTCATACGCCGTTAATTGATTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTATgcttgagggggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgg                                                                                                                                                                                       >  2:477778‑M1/1‑188 (MQ=255)
                                                                          gTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCGGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgaccttcgccacc                                                                                                                                                                        <  2:114745‑M1/251‑79 (MQ=255)
                                                                             tttttttGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccg                                                                                                                                                                      <  2:193950‑M1/250‑81 (MQ=255)
                                                                                              aGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAAAAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCAGTTAATTGCTTTATTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggcggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacctcagagattac                                                                                                                                                    >  1:196723‑M1/1‑153 (MQ=255)
                                                                                                      ccAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttc                                                                                                                                            <  2:389179‑M1/251‑107 (MQ=255)
                                                                                                       cAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttc                                                                                                                                            >  1:406722‑M1/1‑144 (MQ=255)
                                                                                                         aTGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacc                                                                                                                                         >  2:22695‑M1/1‑142 (MQ=255)
                                                                                                             gAGTATCTCCCTCATAAGTCTGTGGTTACGTAAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggcggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccaccaggaaaacgtcagagattactctccttcacccgg                                                                                                                                      >  1:504549‑M1/1‑138 (MQ=255)
                                                                                                               gTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaa                                                                                                                                    >  1:416056‑M1/1‑136 (MQ=255)
                                                                                                               gTATCTCCCTTATAAGTCTGCGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaa                                                                                                                                    >  1:164079‑M1/1‑136 (MQ=255)
                                                                                                                 gtctccCTTATAAGTCTTTTGTTACGTCCATAGAGCGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTTGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattagtctccttcacccggaaac                                                                                                                                  <  2:476953‑M1/249‑117 (MQ=255)
                                                                                                                 aTCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTAACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagcttactctccttcacacggaacc                                                                                                                                  >  2:87358‑M1/1‑134 (MQ=255)
                                                                                                                   ctcCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagatt                                                                                                                                                      <  1:258574‑M1/228‑97 (MQ=255)
                                                                                                                   ctcCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgncagagatt                                                                                                                                                      >  2:258574‑M1/1‑132 (MQ=255)
                                                                                                                         tataAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacg                                                                                                                           <  2:337005‑M1/249‑124 (MQ=255)
                                                                                                                              gTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgat                                                                                                                    <  1:334376‑M1/251‑131 (MQ=255)
                                                                                                                                             aaTAGAGATCTTTGTCACAATTATCTGCAAAGGCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcata                                                                                                     <  2:102877‑M1/251‑146 (MQ=255)
                                                                                                                                               tAGAGAGCTTTGTCACCATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTCAGATGCTTCATCTGGTTTAAACCAAACGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagc                                                                                                   >  1:395337‑M1/1‑104 (MQ=255)
                                                                                                                                               gagagagcTTTGTCACAAGTAGCTGGAAAGGCATACTCCGTTATTTGCTTTCTTTTTTGGCGTAAGAGTAAGATGCTTCAGCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtggtcacaccctatgagctgtaatccgggcggcctgcggcacccggaaaacgtctgagattgctcgcattcacccggaatcaggaacgggttgttggagctgcgggcatagc                                                                                                   <  2:392203‑M1/250‑148 (MQ=255)
                                                                                                                                                 gagagCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagcct                                                                                                 <  1:105432‑M1/251‑150 (MQ=255)
                                                                                                                                                    agCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttct                                                                                              <  1:380189‑M1/251‑153 (MQ=255)
                                                                                                                                                       tttGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgc                                                                                           >  1:373983‑M1/1‑96 (MQ=255)
                                                                                                                                                        ttGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgctggcatagccttcttg                                                                                            <  2:342234‑M1/249‑155 (MQ=255)
                                                                                                                                                        ttGTCACAATTATCTGAACAGTCATACGCCGTTCATTGCTTTCTTTTTTGGCGTCAGCGTACGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgattgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccactcggaaaccgtcacagattaatctccttcacccggaaacaggaacgggttgatggaactacgggcatagccttcttgct                                                                                          >  2:459470‑M1/1‑95 (MQ=255)
                                                                                                                                                         tGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgct                                                                                          <  1:323324‑M1/250‑157 (MQ=255)
                                                                                                                                                          gTCACAATTATCTGCAAAGTCATACGTCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctcc                                                                                        <  2:457803‑M1/251‑159 (MQ=255)
                                                                                                                                                            cacaATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccat                                                                                      <  1:264818‑M1/251‑161 (MQ=255)
                                                                                                                                                                         aaaGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagt                                                                         >  2:240817‑M1/1‑78 (MQ=255)
                                                                                                                                                                                         aaTTGCTTTCTTTTTTGGCGTAAGCGTACGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatccgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggg                                                         >  2:566396‑M1/1‑62 (MQ=255)
                                                                                                                                                                                                    tttttGGCGTAAGCTTAAGATGCTTCACCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagatctggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctac                                               <  2:126838‑M1/250‑200 (MQ=255)
                                                                                                                                                                                                    tttttGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgct                                                 <  1:423447‑M1/248‑198 (MQ=255)
                                                                                                                                                                                                            gtaagcgtaagATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgatacggcttcgat                                      <  1:474585‑M1/251‑209 (MQ=255)
                                                                                                                                                                                                             taagcgtaagATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatt                                     >  1:228527‑M1/1‑42 (MQ=255)
                                                                                                                                                                                                              aagcgtaagATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacggcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagagtcgaggtcatctgcttcggcttcgattt                                    <  2:473791‑M1/251‑211 (MQ=255)
                                                                                                                                                                                                               agcgtaagATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttt                                   >  1:48522‑M1/1‑40 (MQ=255)
                                                                                                                                                                                                                gcgtaagATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccatatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgatccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgattttt                                  >  1:273383‑M1/1‑39 (MQ=255)
                                                                                                                                                                                                                 cgtaagATGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttg                                 >  1:226749‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                                    aagATGCTTCATCTGGTTTAAACCAAAAGGANTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggat                              <  2:285332‑M1/251‑217 (MQ=255)
                                                                                                                                                                                                                    aagATGCTTCATCTGGGTTAAACCAAAAGGATTAAgcttgaggaggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggagacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggtggatggaactgcgggcatagccttcttgctccattcgtgagtacagtaccagggaggcgcggtcagctgctacggcttcgatttttggat                              >  2:44526‑M1/1‑35 (MQ=255)
                                                                                                                                                                                                                       aTGCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctt                           >  1:2523‑M1/1‑32 (MQ=255)
                                                                                                                                                                                                                         gctttcttttgtttaaaccaaAAGGATTAAgcttggggtggtaaagcggaattcgagagatggtgtcgtcccaccctatgagttgtaatccgggcgatctgcgccacccggaaagcgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttt                         <  2:441605‑M1/241‑222 (MQ=255)
                                                                                                                                                                                                                         gCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttt                         <  1:22695‑M1/251‑222 (MQ=255)
                                                                                                                                                                                                                         gCTTCATCTGGTTTAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatcttt                          <  1:499370‑M1/250‑221 (MQ=255)
                                                                                                                                                                                                                                     ttAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttttcctgatagag              <  2:211527‑M1/250‑233 (MQ=255)
                                                                                                                                                                                                                                     ttAAACCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtggcgtcgcaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttttcctgatagag              <  2:451005‑M1/250‑233 (MQ=255)
                                                                                                                                                                                                                                       aaaCCAAACGGCTTAAgtttgaggtggtaaagcggaatacgagagatggtgtagtcacaccctatgagctgtaatccgggcgacctgcgccacccggacaacgacagagattactctccttcacccggaaacaggcacgggttgatggaactgcgtgcttatccttcttgatccattcgtgcgtccagtaccagaggggcgaggtcatcttccacggcttcgctttttggttctttttcctgctagagaat           >  2:108419‑M1/1‑16 (MQ=255)
                                                                                                                                                                                                                                       aaaCCAAAAGGATTTAtctttaggtggtaacccggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggacatcttctacggcttcgatttttggatctttttcctgatagagaat           <  2:380969‑M1/251‑236 (MQ=255)
                                                                                                                                                                                                                                       aaaCCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaccaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgctttttggatctttttcctgatagagaat           >  2:455944‑M1/1‑16 (MQ=255)
                                                                                                                                                                                                                                       aaaCCAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttgtcctgatagagaa            <  2:531620‑M1/250‑235 (MQ=255)
                                                                                                                                                                                                                                         aCCAAAAGGATTAAgcttgaggttgtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttttcctgatagagaattt         <  2:373983‑M1/251‑238 (MQ=255)
                                                                                                                                                                                                                                           cAAAAGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttgtcctgatagagaattttc       <  2:527044‑M1/251‑240 (MQ=255)
                                                                                                                                                                                                                                            aaaaGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggcactttttcctgatagagaattttc       >  1:352006‑M1/1‑11 (MQ=255)
                                                                                                                                                                                                                                             aaaGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttttcctgatagagaattttc       >  2:101049‑M1/1‑10 (MQ=255)
                                                                                                                                                                                                                                               aGGATTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttttcctgatagagaattttcaggt   >  1:380701‑M1/1‑8 (MQ=255)
                                                                                                                                                                                                                                                  aTTAAgcttgaggtggtaacgcggaatacgagagatggtgtcgtcacaccctatgagctgtaatccgggcgacctgcgccacccggaaaacgtcagagattactctccttcacccggaaacaggaacgggttgatggaactgcgggcatagccttcttgctccattcgtgcgtccagtaccagagaggcgaggtcatctgctacggcttcgatttttggatctttttcctgatagagaattttcaggta  >  1:390668‑M1/1‑5 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                    
TCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGATGCTTCATCTGGTTTAAACCAAAAGGATTAAACAATGGCGGAGAATCAATCCACCGTAGAAAATGCAAAAGAGAAACTGGATCGGTGGTTGAAAGATGGCATCACCACGCCGGGTGGAAAACTCCCTTCAGAAAGAGAGCTGGGAGAACTGCTGGGCATTAAACGTATGACGCTGCGCCAGGCGTTGTTGAACCTCGAGGCAGAATCCAAAATCTTCCGTAAGGATCGTAAGGGGTGGTTCGTGACCCAGCCGCGATTTAATTACAGTCCGGAGC  >  NC_000913/4060197‑4060687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.