| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,578,950 | Δ6,094 bp | [yhhW]–[yrhB] | [yhhW], yhhX, ryhB, yhhY, yhhZ, yrhA, insA6, insB6, yrhA, yrhD, [yrhB] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3578950 | 3585043 | 6094 | 37 [0] | [0] 36 | [yhhW]–[yrhB] | [yhhW],yhhX,ryhB,yhhY,yhhZ,yrhA,insA6,insB6,yrhA,yrhD,[yrhB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3578949 | 0 (0.000) | 36 (0.490) | 32/492 | 0.7 | 100% | intergenic (‑223/+1) | gntR/yhhW | DNA‑binding transcriptional repressor GntR/quercetin 2,3‑dioxygenase |
| ? | NC_000913 | 3585044 = | 0 (0.000) | intergenic (+1/+37) | yrhB/ggt | putative heat shock chaperone/glutathione hydrolase proenzyme | |||||
CCTGAAGTACGGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCAC > NC_000913/3578699‑3579180 | ccTGAAGTACGGGTCTTTTCTTTGTCATCGTCCTGAAGGTACAAAAGATATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTGTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGtt < 2:364699/251‑1 (MQ=255) tGAAGTACGGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTc > 1:357909‑M1/1‑249 (MQ=255) gggTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagcc < 1:80928‑M1/251‑11 (MQ=255) tttcttttTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctctt < 2:117541‑M1/250‑16 (MQ=255) tcttttTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcc < 1:85126‑M1/250‑18 (MQ=255) ttttCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttccca < 1:189320‑M1/249‑20 (MQ=255) ttttCACCGGCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAAGTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGAAGCCGTTGAGTTcaaaatagccctcttccca < 2:92463‑M1/249‑20 (MQ=255) cGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagaggg > 1:401803‑M1/1‑223 (MQ=255) gTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggc < 2:175938‑M1/251‑30 (MQ=255) ccTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccg < 2:401803‑M1/251‑32 (MQ=255) ccTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTCCCCGGGGAAAACAGTGCTTGTTTACAAGTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttgccacgaagagggcc < 2:57967‑M1/250‑31 (MQ=255) gAAGGTACAAACGGGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAAACCCGGAAGCGTACATCATCACGCGACCGGAACGACGGAGGAAGCCAGCAAAAAGGCAGGCTTCAAAGAGGCCGTTGAGTTacgaatagcactcttcccacaaagagggccaccc > 2:13703‑M1/1‑217 (MQ=255) aaaGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagt > 1:201865‑M1/1‑208 (MQ=255) agagATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGATTTcaaaatagccctcttcccacgaagagggccgctaaccttagtacc < 2:110014‑M1/251‑46 (MQ=255) gagaTAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTACCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccc > 1:418069‑M1/1‑205 (MQ=255) agatTCTCTTAGTTTAACACGGACACATAAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAAATGCCGTTGAGTTcaaaaaagccctcttcccangaagagggcagctaaccttagtacaccgccg > 2:265220‑M1/1‑200 (MQ=255) gatTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgt > 1:566257‑M1/1‑199 (MQ=255) gatTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATAGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagcaggccgctaaccttagtaccccgccgt > 1:479765‑M1/1‑199 (MQ=255) tctTAGTTTACCACGGACACATCAGAACCTTCCCGGGGCAGACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAACGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgacgagggccgctaaccttagtaccacgccgttaaat > 2:178140‑M1/1‑194 (MQ=255) gTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtcc > 1:305165‑M1/1‑150 (MQ=255) gTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggccca > 1:225613‑M1/1‑144 (MQ=255) ttACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGCAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaac > 1:275163‑M1/1‑142 (MQ=255) aGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgcttt > 2:442155‑M1/1‑131 (MQ=255) tCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttc > 1:18276‑M1/1‑108 (MQ=255) gCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccctcgcctctttcagcgccact > 1:6648‑M1/1‑99 (MQ=255) gacgCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctg > 1:173421‑M1/1‑93 (MQ=255) gacgCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctg > 1:338783‑M1/1‑93 (MQ=255) cccGGAAGCGTACATTAGCACGCGACCGGAGCGCGCGAGGAAGCATGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaactagccctcttcccaccaagagggccgctaaccttagaaccccgccgttaactcatccaccgagcgcgggtcggatgcgccgcacaactcgccgtccggcccaaccacaatgctttgtgtactgcccctcgcctctttcagcgccactttttgaccttttgcttcc > 2:34407‑M1/1‑80 (MQ=255) cagcagcACGCGACCGGGGGGGGGGAGGAAGCCTGAAAAAGGGCAGGCTAAAAAGATGCCGTTGAGTAaaaaacaccccccttcccaagaagggggccgctaacctaagccccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcg < 1:175520‑M1/248‑184 (MQ=255) aCGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgggtactgcccatcgcctctttcagcgccactttatgaccttttgcttccagcagcttgcgcgtatcagg > 2:419595‑M1/1‑61 (MQ=255) gACCGGAGCGAGCGAGGACGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgacgagggccgctaaccttagaaccccgccgttaaatcatcaaccgagcgcgggtcggatgcgccgtaaaaaacaccgtccggcccaaccataatgctttttgtactgaccatcgcaccttccagcaccactttctgcccttttgcttcaagcagcttgagcgtatccgggctc > 2:477643‑M1/1‑57 (MQ=255) gACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggct > 1:189991‑M1/1‑57 (MQ=255) cgagcgagGAAGCCTGCATAAAGGCAGGCTTCAAAGATGCCGTTGCGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatcaaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgcccttttgcttccagcagcttgagcgtagccgggctaaacccttt > 2:492645‑M1/1‑49 (MQ=255) gagGACGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgcccctttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcg > 1:144405‑M1/1‑44 (MQ=255) aaGCCTGCACAAAGGCAGGCTTCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacg > 1:419341‑M1/1‑40 (MQ=255) ttCAAAGATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatccgggctaaaccctttttcgacacgcagctcgtccggcaaccact > 2:193292‑M1/1‑20 (MQ=255) gATGCCGTTGAGTTcaaaatagccctcttcccacgaagagggccgctaaccttagtaccccgccgttaaatcatccaccgagcgcgggtcggatgcgccgtacaactcaccgtccggcccaaccataatgctttgtgtactgcccatcgcctctttcagcgccactttctgaccttttgcttccagcagcttgagcgtatct > 2:352627‑M1/1‑14 (MQ=255) | CCTGAAGTACGGGTCTTTTCTTTTTCATCGTCCTGAAGGTACAAAAGAGATAGATTCTCTTAGTTTAACACGGACACATCAGAACCTTCCCGGGGAAAACAGTGCTTGTTTACAATTATTAGATATACACTAAATCAATTGCATCGCATTGTGCTAACGACGCGGCAAAACCCCGGAAGCGTACATCAGCACGCGACCGGAGCGAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCAC > NC_000913/3578699‑3579180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |