Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 832,467 Δ15,538 bp ybiA[glnH] 16 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 832467 848004 15538 55 [0] [0] 54 ybiA–[glnH] ybiA,dinG,ybiB,hcxB,zbiJ,ybiE,ybiJ,ybiI,ybiX,fiu,mcbA,rlmF,ybiO,glnQ,glnP,[glnH]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 8324660 (0.000)54 (0.740) 50/492 0.2 100% intergenic (+230/+2) rhlE/ybiA ATP‑dependent RNA helicase RhlE/N‑glycosidase YbiA
?NC_000913 848005 = 0 (0.000)intergenic (‑1/+403) glnH/dps L‑glutamine ABC transporter periplasmic binding protein/DNA protection during starvation protein

AAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAGCCAATTGTTCGCGCAACTCCATTAAAAGGTAGCCCAGTCGATTCTTGCCCTTACCATGACCACCGTCTCCCCAGTAAGCATCGTTTTCCGTATGCTCAACCAGTTTTGCGGGCGCGGTTGCCAGCAAGAGCGCACGCAGTTCTGCATGCTGTTCGAATTTAGCGCGAAGTGCTTTTCGCATCACCTGTTCTTTGACCGACTCCCAGTTTTTACGCAGAGGCTTAGAACGATCGC  >  NC_000913/832216‑832715
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                         
aaaCCTGCCGCTGCTCATTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGTCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGAc                                                                                                                                                                                                                                                           <  1:335693/251‑1 (MQ=255)
        cGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAAGCCGGATAAGGCGATTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGACCCCGGGAAAACATTTATCTGTTTTACCGCCCATAAGCCACCGAGCCagcatttc                                                                                                                                                                                                                                                   >  2:221882‑M1/1‑243 (MQ=255)
               caggaatcttTTATGCCGGGCTAGGCCCGGCATCAGGCGGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGACATAAATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGGTTACGCCGCATCCGGCATTTCACAACAAGCTCTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttcctttttt                                                                                                                                                                                                                                            <  2:357127‑M1/247‑16 (MQ=255)
                        tttATGCCGGGCTATGCCCGGCATCAGGCTGAGGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatcc                                                                                                                                                                                                                                      <  2:485055‑M1/248‑22 (MQ=255)
                           aTGCCGGGCTATGCTCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGCGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAACCACCGAGACagcatttccttttttctatccacggg                                                                                                                                                                                                                                 >  2:111040‑M1/1‑224 (MQ=255)
                             gCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTCCCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggac                                                                                                                                                                                                                               <  1:322630‑M1/250‑29 (MQ=255)
                                     aTGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccc                                                                                                                                                                                                                        <  1:243745‑M1/249‑36 (MQ=255)
                                      gggccggcATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCGACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGTGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttggctatccacgggacgatcccctgc                                                                                                                                                                                                                     <  2:172228‑M1/248‑39 (MQ=255)
                                              aTCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCCTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacatt                                                                                                                                                                                                             >  1:81649‑M1/1‑205 (MQ=255)
                                              aTCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGGAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacatt                                                                                                                                                                                                             >  1:23626‑M1/1‑205 (MQ=255)
                                                 aGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcac                                                                                                                                                                                                          <  1:498241‑M1/251‑50 (MQ=255)
                                                  ggCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGACGCATCCAGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgctggacattccc                                                                                                                                                                                                          >  2:552692‑M1/1‑201 (MQ=255)
                                                    cTGATGAACAAACGCAAAACTGCCTGTTGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGACGCATACGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgagacgatcacctccgtgcaattcaaat                                                                                                                                                                                                        >  2:393901‑M1/1‑199 (MQ=255)
                                                       atgaACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatat                                                                                                                                                                                                    <  1:501946‑M1/251‑56 (MQ=255)
                                                             aaaCGTAAAACTGCATGCTGCGCTACGCTTATCAGGCCCACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGCAGGCAGGATAAAGCGTTTACGCCGCATCCGGCATTTCACCACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCAATAAGCCACCAAGACagcatttccatttttctatccacgggacgatcccctgcgtgccattcacatatctgaaaa                                                                                                                                                                                               >  2:457671‑M1/1‑190 (MQ=255)
                                                             aaaCGCAAAACTGCCTGATGCGCTACGCTTATCAGCCCTACGTGAACTCCGCAATATATTGAATTTGCATGCTTTTGTACGCCGGATAACGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCACTTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAACACCCCGAGACagcgtttccttttttctatccacgggacgttcccccgcgtgaccttcaccaatcacaaaa                                                                                                                                                                                               >  2:449424‑M1/1‑190 (MQ=255)
                                                                 gCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcg                                                                                                                                                                                          <  1:125893‑M1/251‑66 (MQ=255)
                                                                    aaaCTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgc                                                                                                                                                                                       >  2:377058‑M1/1‑183 (MQ=255)
                                                                             gATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagtttt                                                                                                                                                                                <  1:168992‑M1/249‑76 (MQ=255)
                                                                              atgagctacgCTTAGCAGGCCGACGTGAACTCTGCAATATATTGGATATGCATGCTTTTGTAGGCCGGATAAGTCGTTTACGCCGGATCCGGCATTTAACAACAAGCACGTTTCAGAAATTTGAGAACACGGGAAAGAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctagccacgggacgatccccggcgtgacattcgcatatatgaaaaaatcgtgccagttttgca                                                                                                                                                                             <  2:238563‑M1/247‑79 (MQ=255)
                                                                                     aCGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactcc                                                                                                                                                                        <  1:215814‑M1/249‑84 (MQ=255)
                                                                                           aTCAGGCCTACGTGAACTCTGCAATATATTGAATGTGCATTCTTGTGGAGGCCGGATAAGGAGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAATAAGTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttt                                                                                                                                                                <  2:552289‑M1/251‑92 (MQ=255)
                                                                                               ggCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAATGCGTTTACGCCGCATCCTGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACCAGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGTGACagcatttccttttttctatccacgggacgatcccctccgtgacattcccatatatgaaaaaatatggccagttttgcaacgcattaatattttgg                                                                                                                                                            >  2:172968‑M1/1‑156 (MQ=255)
                                                                                                    aCGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgc                                                                                                                                                       >  1:128118‑M1/1‑151 (MQ=255)
                                                                                                           ctctGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaa                                                                                                                                                 >  1:144092‑M1/1‑144 (MQ=255)
                                                                                                           ctatgcaATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAACTTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgttccactgcgtgacattcacatatatgaaaaaatcgcgccagttttncaactccttgatttttcgagatgcggcaaa                                                                                                                                                 >  2:272626‑M1/4‑144 (MQ=255)
                                                                                                             ctGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatatccttttttctatccacgcgacgagcccctgcgtgacattcacatatatgaaaaaatcgtcccagttttgcaactccttgatttttcgagatgcggcaaaaac                                                                                                                                              >  2:571618‑M1/1‑142 (MQ=255)
                                                                                                                        tGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacg                                                                                                                                    <  2:144092‑M1/250‑120 (MQ=255)
                                                                                                                              tGCATGCTTTTGTAGGCCGGATACGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgagcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaattccttgatttttcgagatgcggaaaaaacgtgatgcacgatttat                                                                                                                              >  2:144674‑M1/1‑125 (MQ=255)
                                                                                                                                   gCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggc                                                                                                                         >  1:285314‑M1/1‑120 (MQ=255)
                                                                                                                                      tttGTAGGCCGGATAAGGCGTTTACGCCGCNTCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTGACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaat                                                                                                                      <  2:295940‑M1/250‑134 (MQ=255)
                                                                                                                                         gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccc                                                                                                                  <  1:111040‑M1/251‑138 (MQ=255)
                                                                                                                                         gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccc                                                                                                                  >  1:59990‑M1/1‑114 (MQ=255)
                                                                                                                                            ggCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctg                                                                                                                >  1:172463‑M1/1‑111 (MQ=255)
                                                                                                                                                ggATAAGGCGATTACGCCGCATCCGGCATTTCACAACAAGCACTAGTCAGAAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcctttccttttttctatccacgggaagctcccctgcgtgaaattcacatatatgaaaaaatcgtgctaactttccaactcctttatttttcgagttgcggcaaaaacgtgatgcacgatcaatcggacaatacctcga                                                                                                               >  2:559814‑M1/1‑107 (MQ=255)
                                                                                                                                                     aGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACAAGGGAAAAAATTTATATGTTTTACCGCCCATAATCCACCGAGACagcatttccttttttctatccacgagacgatcccctgcgtgaccttcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgctttctagggcaataccctgaagacgcccc                                                                                                      >  2:534062‑M1/1‑102 (MQ=255)
                                                                                                                                                            tACGCTGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGACCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctg                                                                                                <  2:543167‑M1/250‑156 (MQ=255)
                                                                                                                                                                                acaacaAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttg                                                                                                                                                                               <  1:543099‑M1/151‑77 (MQ=255)
                                                                                                                                                                                acaacaAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttg                                                                                                                                                                               >  2:543099‑M1/1‑75 (MQ=255)
                                                                                                                                                                                     aaGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctggggcaccaatctggtgcgctaaaatt                                                                      >  1:406460‑M1/1‑70 (MQ=255)
                                                                                                                                                                                      aGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctggggcaccaatctggtgcgctaaaattg                                                                     <  1:101765‑M1/251‑183 (MQ=255)
                                                                                                                                                                                             gTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctggggcaccaatctggtgcgctaaaattgtgcact                                                               <  1:254451‑M1/250‑189 (MQ=255)
                                                                                                                                                                                                                      aaaTTTATCTGTTTTACCGCCCATAACACACCGAGAAagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatctgaaaaaatagagcccgttttgcaattccttggtttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctgggtcaccaatctggtgcgctataattgtgcactcaacacagtgattatttagcgtaaa                                      >  1:211371‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                                          ttATCTGTTTTTCCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgattttgcgagatgcggcaaaaacgtgatgcacgatttataggtcaataccctgaagatgcaccattctggggcaccaatctggtgcgctaaaattgtgcactcaacacagtgattatttagcgtaaaacct                                  <  1:323357‑M1/250‑218 (MQ=255)
                                                                                                                                                                                                                                gTTTTACCGCCCAGAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactcctcgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctggggcaccaatcttgtgcgctaaaatggtgcactcaacacagtgattatttagcgtaaaacctgatta                             <  2:373061‑M1/249‑223 (MQ=255)
                                                                                                                                                                                                                                  tttACCGCCCATAAGCCCCCGAGACagcatttcctttttgctatccacgtgacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttgtgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccatgctggggcaccaatctggtgcgctaaaattgtgttctcaacacagtgattatttagcgtaaatcctgatgaaaa                          <  2:330308‑M1/250‑226 (MQ=255)
                                                                                                                                                                                                                                  tttACCGCCCATAAGCCACCGAGACagcctttccttttttctatccacgggacgatcccctgcgtgacattcccatatatgtaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaacaacgtgctgcacgatttatagggcaataccctgaagatgcaccattatgtggcaacaatctggtgcgctaaacttgtgcactcaacacagtgattatttagcgtaaaacctgatgaaaa                          >  2:41177‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                                                   tgaccGCCCAGAAGCCACCGAGAAcgactttccttttttccatccacgggacgatcccctgcgggtcattcccatatatgaaaaaatcgtgccagttttgcaactccgtgatttttcgagatgcggcaaaaacgtgatgcacgatttataggtcaataccctgaagatgcaccattctgggtcactaatctggtgcgctaaaattgtgcacacaacacagtgattatttagcgtaacacctgatgaaaaa                         <  2:212393‑M1/248‑227 (MQ=255)
                                                                                                                                                                                                                                     aCCGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctggggcaccaatctggtgcgctaaaattgtgcactcaacacagtgattatttagcgtaaaacatgatgaaaaaac                       >  2:196030‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                                      ccGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccat                                                                                                    <  1:73786‑M1/172‑152 (MQ=255)
                                                                                                                                                                                                                                      ccGCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccat                                                                                                    >  2:73786‑M1/1‑21 (MQ=255)
                                                                                                                                                                                                                                        gCCCATAAGCCACCGAGACagcatttccttttttctatccacgggacgatccccggcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctggggcaccaatctggtgcgctaaaattgtgcactcaacacagtgattatttagcgtaaaacctgatgaaaaaacaatc                   <  1:534062‑M1/251‑233 (MQ=255)
                                                                                                                                                                                                                                              aaGCCACCGAGACagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctggggcaccaatctggtgcgctaaaattgtgcactcaacacagtgattatttagcgtaaaacctgatgaaaaaacaatctttatg             <  1:423176‑M1/251‑239 (MQ=255)
                                                                                                                                                                                                                                                      gagaCagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctggggcaccaatctggtgcgctaaaattgtgcactcaacacagtgattatttagcgtaaaacctgatgaaaaaacaatctttatgtaacgatt     >  1:575817‑M1/1‑5 (MQ=255)
                                                                                                                                                                                                                                                         aCagcatttccttttttctatccacgggacgatcccctgcgtgacattcacatatatgaaaaaatcgtgccagttttgcaactccttgatttttcgagatgcggcaaaaacgtgatgcacgatttatagggcaataccctgaagatgcaccattctggggcaccaatctggtgcgctaaaattgtgcactcaacacagtgattatttagcgtaaaacctgatgaaaaaacaatctttatgtaacgattgtg  <  1:377058‑M1/251‑250 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                         
AAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAGCCAATTGTTCGCGCAACTCCATTAAAAGGTAGCCCAGTCGATTCTTGCCCTTACCATGACCACCGTCTCCCCAGTAAGCATCGTTTTCCGTATGCTCAACCAGTTTTGCGGGCGCGGTTGCCAGCAAGAGCGCACGCAGTTCTGCATGCTGTTCGAATTTAGCGCGAAGTGCTTTTCGCATCACCTGTTCTTTGACCGACTCCCAGTTTTTACGCAGAGGCTTAGAACGATCGC  >  NC_000913/832216‑832715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.