Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,619,069 Δ18,342 bp rhsB[yhiN] rhsB, yhhH, yhhI, yhhJ, rbbA, yhiI, yhiY, yhiJ, yhiM, [yhiN]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3619069 3637410 18342 65 [0] [0] 65 rhsB–[yhiN] rhsB,yhhH,yhhI,yhhJ,rbbA,yhiI,yhiY,yhiJ,yhiM,[yhiN]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 36190680 (0.000)65 (0.890) 55/492 0.1 100% intergenic (+79/‑124) nikR/rhsB DNA‑binding transcriptional repressor NikR/rhs element protein RhsB
?NC_000913 3637411 = 0 (0.000)intergenic (‑1/‑231) yhiN/pitA putative oxidoreductase YhiN/metal phosphate:H(+) symporter PitA

ACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3618823‑3619068
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGCGCTCCTCTTAGAAAAAACGGGCGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATGGCGTAACGTCCTATGCTACATTTGTTTGCT  >  NC_000913/3637411‑3637659
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
cCGACCTCTCCGTCGCCACGCTGCATGTGCCCATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATCCCCTATCCGAGTTGC                                                                                                                                                                                                                                                      <  2:393337/250‑1
ACGACCTCCCCGTCGCCACGCTGCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATTCCCTATCCGAGTTGC                                                                                                                                                                                                                                                      <  2:302304/251‑1
   ACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCT                                                                                                                                                                                                                                                   <  2:191181/251‑1
          CGTCGCCACGCTGCATGTGCACATCAACCACGATGACTGTCTGGAAATCTCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGGCGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTA                                                                                                                                                                                                                                            <  2:403261/251‑1
                 cCGCTGCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCGAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAAC                                                                                                                                                                                                                                    <  2:458705/250‑1
                 ACGCTGCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAAC                                                                                                                                                                                                                                    <  1:361352/251‑1
                   GCTGCAAGTGCTCATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTGTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCGATTATTGGGTCCTTTGGTGAACGATCAACAAATGGCCACTAGCACTCCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCATAAAAAAACGG                                                                                                                                                                                                                                  <  2:564181/251‑1
                      GCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGGACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGacg                                                                                                                                                                                                                               >  1:377617/1‑248
                      GCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGacg                                                                                                                                                                                                                               >  1:61689/1‑248
                       CATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGT                                                                                                                                                                                                                              <  1:550880/251‑1
                          GTGCAAATCAACCACGAAGGATTGCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACCCCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGA                                                                                                                                                                                                                            <  1:581116/250‑1
                            GCACATCAACCACGACGACTGTCTGGAAAGCGCCGTGTTGAAAGGGGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGAATTTGCAGTGCTTGCCGAAGGAAGATTGGGTCTATTATTGGGTCCTTTGGTGAACGATCACCAAAGGGCCACTAGCCCACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGcat                                                                                                                                                                                                                          <  2:377064/250‑4
                               CATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTA                                                                                                                                                                                                                      <  1:392292/251‑1
                                    ACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGAT                                                                                                                                                                                                                 <  1:155773/251‑1
                                        CGACGACTGTCTGGAAATCGCCGTGTTGAAANGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCT                                                                                                                                                                                                             <  2:272305/251‑1
                                        CGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCT                                                                                                                                                                                                             <  1:409819/251‑1
                                         GACGATTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGTCGTTATCGCCCAGCGCGGCGTGCGGCACTGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCTACTAGCACACCAGATGCCTCGCTAAATACCCTATCCGAGGTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTC                                                                                                                                                                                                            <  2:341087/251‑1
                                         GACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGACGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTCAAAAAACGGCCGTGAATTGTAACAATTCCTC                                                                                                                                                                                                            >  2:214033/1‑251
                                         GACGACTGTCTGGAAAGCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTC                                                                                                                                                                                                            <  2:245582/251‑1
                                            CGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAG                                                                                                                                                                                                          <  2:326409/251‑1
                                                    TGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTGGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGC                                                                                                                                                                                                   <  2:407542/250‑1
                                                    TGGAAATCGCCGTGTTGAAAGGTGACATGGGGGACGTGCAGCATTTTGCCGATGACGTAATCGCCCAGCGCGGCGGGCGGCACGGGCATTTGCAGTGCTTGCCGACGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCACTAAATACCCTCTCCGAGTTGCGCTCCTCTTAAAAAAACGATCGAGAATTGTAAAGATTCATCAGgtgacga                                                                                                                                                                                                   >  2:551276/1‑243
                                                     GGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGC                                                                                                                                                                                                   <  1:184840/249‑1
                                                            GCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATGTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATC                                                                                                                                                                                          <  2:239992/251‑1
                                                            GCCGTGTTGAAAGGTGAAATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATC                                                                                                                                                                                          >  2:246583/1‑251
                                                             CCGTGTTGAAAGGGGACATGGGAGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATACCTCAGTAGTAGCACCAGCATC                                                                                                                                                                                          >  2:118382/1‑250
                                                                 ggTGAAAGGTGACAGGGGTGACGTGCAGCATTTTGCCGAAGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATGGAGTCTATTAGGGGGTCCTTTGGGGAAAGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATCCCCTATCCGAGTTTCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGAGTCCTCAGTGGACGCACCAGCATCAATAT                                                                                                                                                                                     <  2:30967/249‑1
                                                                        ggggactTGGGTGACGTGCAGCATTTTGCCGATGACGTTAGCGCCCAGCTCGGCGGGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAA                                                                                                                                                                              <  2:199879/244‑1
                                                                        GGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAA                                                                                                                                                                              <  1:511487/251‑1
                                                                         GTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAA                                                                                                                                                                             <  1:160145/251‑1
                                                                           GACATGGGTGACGTGCAGCATTTTGCCGATGACGCTATCGCCCAGCGCGGCGTGCGGCACGGGCCTTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCCGTGGTCGCACCAGCATCAATTTTACTAAAAGG                                                                                                                                                                           >  2:93045/1‑251
                                                                           GACATGGGGGACGGGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGAATCAATATTACTAAAAGG                                                                                                                                                                           <  2:477713/251‑1
                                                                            ACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGA                                                                                                                                                                          <  1:470088/251‑1
                                                                              ATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAG                                                                                                                                                                        <  1:381721/251‑1
                                                                                GGGTGACGTGCAGCATTTTGCCGATGACGTTATCGACCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGT                                                                                                                                                                       >  1:159004/1‑250
                                                                                  GTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATT                                                                                                                                                                    >  1:507917/1‑251
                                                                                    GACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTG                                                                                                                                                                  <  1:288377/251‑1
                                                                                              ATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTAT                                                                                                                                                        >  1:363604/1‑251
                                                                                                     CGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGAT                                                                                                                                                 <  1:295324/251‑1
                                                                                                      GATGACGTTATCGCCCACCGCGGCGTGAGGCACGGGCATTTGCAGTGCTTGCCGAAGGCAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGAT                                                                                                                                                 >  1:450890/1‑250
                                                                                                       ATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGCAGATTGAGTCTATAATTGGGTCCTTTGGTGAACGATCAAAAAAGGGCCACTCGCACACCTGATTCCTCTCTCAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATCAGATA                                                                                                                                                >  1:322876/1‑250
                                                                                                         GACGTTATCGCCCAGCGCGGCGTGCGGCACGNGCATTTGCAGTGCTTGCCTAAGGAAGATTTATGCTATTATGGAGTCCTTGGGTGAACGATCTACAAAGGGGCACTATCTCTCCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCATTGGTCTCTCCAGCATCAATATTACTAAAAGGAAGTATTTGCCTAAATTATATAAGATAATT                                                                                                                                             <  2:273592/251‑1
                                                                                                             TTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTT                                                                                                                                         >  1:128742/1‑251
                                                                                                                 CGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTT                                                                                                                                      <  1:122774/250‑1
                                                                                                                 CGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTT                                                                                                                                      <  1:509096/250‑1
                                                                                                                  GCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGA                                                                                                                                    <  1:39333/251‑1
                                                                                                                    CCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGT                                                                                                                                  <  1:539046/251‑1
                                                                                                                             CGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTGTTTGAGTGAAATCCAT                                                                                                                         <  1:411344/251‑1
                                                                                                                              GTGCGGCACTGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACCCCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAAGTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATA                                                                                                                        <  2:127092/251‑1
                                                                                                                                                      TTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCT                                                                                                >  1:79849/1‑251
                                                                                                                                                           GAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTTCTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATT                                                                                           <  1:487288/251‑1
                                                                                                                                                              GGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCA                                                                                        <  1:198185/251‑1
                                                                                                                                                                            ATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCG                                                                          >  1:567182/1‑251
                                                                                                                                                                                TTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCAAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCGTCAATATTACTAAAAGGA                                                                                                                                                                          <  2:493825/151‑1
                                                                                                                                                                                TTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCAAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGA                                                                                                                                                                          >  1:493825/1‑151
                                                                                                                                                                                              GAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTAACCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATG                                                        <  1:214033/251‑1
                                                                                                                                                                                                   ATCAACAAAGGGCCACTAGCACACCTGATTCNCCGCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAATGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCG                                                   <  2:290357/251‑1
                                                                                                                                                                                                   ATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCG                                                   >  1:254161/1‑251
                                                                                                                                                                                                      AACAACGGGCCACTAGCTCATCTGATTCCTCTCTAAATCCCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATTTCAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAACAAAGTCTATATTTCACTTTGCCTGCGCCGCGAAAGTCACTGATAATGCGCCGCGT                                                >  2:42967/1‑251
                                                                                                                                                                                                         AAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTC                                              >  1:432426/1‑250
                                                                                                                                                                                                                    AGCACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAA                                   <  1:573850/250‑1
                                                                                                                                                                                                                      CACACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATG                                <  2:377617/251‑1
                                                                                                                                                                                                                       cCACCTGATTCCTCTCTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATGG                               <  1:13212/250‑1
                                                                                                                                                                                                                                      CTAAATACCCTATCCGAGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATGGCGTAACGTCCTATGC                >  2:541005/1‑251
                                                                                                                                                                                                                                                    CGAGTTGCGCTACTCTTAAAAAAACGGACGTGAATTGTACAGATTCCTCAGTGGTCGCCCCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATACATACCGGGTGCAAATCAAAAAAAGTCTATTTTTCACTTTGCCCGCTCCGCGAAAGTCACTGATAATGCGCCCCGTTCATGTCCTCACAANTGCGGAACGCCCTATGCTACCTTTGTTTGCT  >  2:279237/1‑251
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
ACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGAGTCTATTATTGGGTCCTTTGGTGAACGATCAACAAAGGGCCACTAGCACACCTGATTCCTCTCTAAATACCCTATCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3618823‑3619068
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGCGCTCCTCTTAGAAAAAACGGGCGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATGGCGTAACGTCCTATGCTACATTTGTTTGCT  >  NC_000913/3637411‑3637659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.