Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,795,656 Δ5,717 bp glaR[nrdE] glaR, kbp, yqaE, ygaV, ygaP, stpA, alaE, ygaC, ygaM, nrdH, [nrdI], [nrdE]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2795656 2801372 5717 62 [0] [0] 63 glaR–[nrdE] glaR,kbp,yqaE,ygaV,ygaP,stpA,alaE,ygaC,ygaM,nrdH,[nrdI],[nrdE]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 27956550 (0.000)62 (0.860) 54/490 0.1 100% intergenic (+2/‑19) gabP/glaR 4‑aminobutanoate:H(+) symporter/DNA‑binding transcriptional repressor GlaR
?NC_000913 2801373 = 0 (0.000)coding (409/411 nt)
coding (26/2145 nt)
nrdI
nrdE
dimanganese‑tyrosyl radical cofactor maintenance flavodoxin NrdI
ribonucleoside‑diphosphate reductase 2 subunit alpha

TGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAATTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2795406‑2795655
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTGTTT  >  NC_000913/2801373‑2801614
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
gGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAATTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATTGCTCGCTGGAAAAAGCTGGGATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCT                                                                                                                                                                                                                                                   <  1:224147/250‑1
 GCGCAAAATTCTGCGATCAGAATGAAGCGAAATTCGCTTGCTAATGTTGCTTTATCCGTGGCGCCCCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGAGCGCCACCGGCTTATGAGCGATAGGGATTATCTGTACCGTGCCAATTATGTCTCGCTGGAAAAAGCTGGTATTGGGGCAAAAAACACCCGTTCATAATACGCGCTGATCTt                                                                                                                                                                                                                                                  <  2:325698/251‑2
      AAATTCTGCGAGCAGAAGGAAGCGAACTTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGCTAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTTGAAAAAGCTGGTATTGTGGCAAAAACCACCCGGTCATAATACGCGCTGATCTGACGC                                                                                                                                                                                                                                              >  2:354844/1‑250
                 GCAGAAGGAAGCGAAATTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCCAGACATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGGTGGAAAAAGCTGGGAATGTGGCAAAAAACACCCGATCATAATAAGCGCTGATCTGACGCAGGAAAAGATGG                                                                                                                                                                                                                                  >  2:246486/1‑251
                  CAGAAGGAAGCGAAATTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGg                                                                                                                                                                                                                                 >  1:521716/1‑250
                            CGAAATTCGCTTGCGAATGTGGCTTTATCCGNGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCG                                                                                                                                                                                                                       <  2:285258/251‑1
                             GAAATTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGC                                                                                                                                                                                                                      >  1:287179/1‑251
                             GAAATTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCGTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGTTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTCCCACGCGC                                                                                                                                                                                                                      <  1:329029/251‑1
                                          GAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATTGCTCGCTTGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCT                                                                                                                                                                                                         <  1:495998/251‑1
                                                       TCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACATCTACGA                                                                                                                                                                                             >  1:224435/1‑250
                                                                        TAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTC                                                                                                                                                                            >  1:214320/1‑250
                                                                          GTCATCGGCTTTATTACCTGTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAG                                                                                                                                                                          <  2:573186/250‑1
                                                                                  CTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGCTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAA                                                                                                                                                                  >  1:15630/1‑250
                                                                                     TATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATTCCATGCTTAACCTCTACGCTAGCGCAGGCCGCACTCAGTTCGATAAAGAC                                                                                                                                                              >  2:42859/1‑251
                                                                                        TACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCG                                                                                                                                                            <  1:428475/250‑1
                                                                                          CCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCA                                                                                                                                                         <  1:534017/251‑1
                                                                                          CCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCC                                                                                                                                                          >  1:25874/1‑250
                                                                                               GTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCG                                                                                                                                                    >  1:138717/1‑251
                                                                                                 GTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTT                                                                                                                                                  >  1:42151/1‑251
                                                                                                 GTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTT                                                                                                                                                  <  1:75368/251‑1
                                                                                                   TGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGATCGATAAAGACCGCCAGGCCGTTG                                                                                                                                                 >  2:374947/1‑250
                                                                                                   TGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAAAACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTTAATGCGATGCTTAAACTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGc                                                                                                                                                >  2:427353/1‑250
                                                                                                             GCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAAACTCTACGATAGCGCAGGTCGCATTCAGTTCGNAAAAGACCGCCAGGCCGTTGCCGCCTTTATT                                                                                                                                      >  2:284062/1‑251
                                                                                                                  TCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGCTAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGCTGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCCATCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGAC                                                                                                                                 >  2:346594/1‑251
                                                                                                                     GTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGCAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATCAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGC                                                                                                                               >  1:332736/1‑250
                                                                                                                             CAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGGATTGAGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGATCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGgc                                                                                                                      >  1:250751/1‑249
                                                                                                                                CAGTTAGAAGTGATCTCCCCCGGCTTATTAGCGATAGGGATTATCTGTAACGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGATGATCTGACGAAGGAAACGATGGATTACCACCCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTCCGCTAAAGACCCACAGGCCCTTGCCGCCTTTATTGCGACCCATGTGCGTCCGg                                                                                                                   >  2:477935/1‑250
                                                                                                                                CAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCG                                                                                                                    >  1:406624/1‑250
                                                                                                                                       AAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGT                                                                                                            <  1:66890/251‑1
                                                                                                                                           GATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACC                                                                                                        >  1:397991/1‑251
                                                                                                                                              CTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCTTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATG                                                                                                                                                                                                           <  2:469705/149‑1
                                                                                                                                              CTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATG                                                                                                                                                                                                           >  1:469705/1‑149
                                                                                                                                                CCACCGGCTTAGTAGCGATAGGGATTATCTGGACCGTGCCAATTATGGCGCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTgc                                                                                                     <  2:439714/249‑3
                                                                                                                                                     GGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCC                                                                                              <  1:115098/251‑1
                                                                                                                                                                GATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGC                                                                                   >  1:83092/1‑251
                                                                                                                                                                    GGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAAAACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCCCGCGCTGAATGCGATGCTTAACCTCTACGCTAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCCGGCCGTTGACGCCTTTATTGCGCCGCATGTGCGTCCAAACAGTGTGACCTTCAGTAGCCAGCAGCAGGGCCTtg                                                                               >  2:302709/1‑249
                                                                                                                                                                     GGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCCCGCGCTGAATGCGATGCTTAACCTCTACGATAGCTCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAA                                                                              <  1:246486/251‑1
                                                                                                                                                                        TTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTG                                                                           >  1:23987/1‑251
                                                                                                                                                                              GTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTG                                                                       <  1:346594/249‑1
                                                                                                                                                                              GTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACACGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGCCCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGT                                                                     >  1:144717/1‑251
                                                                                                                                                                                  CGTGCCAATTATGGCGCGCTGGAAAAAGCTGGGATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCCCGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAAC                                                                 <  1:516688/251‑1
                                                                                                                                                                                     cCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGA                                                               <  2:521716/249‑1
                                                                                                                                                                                     GCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGAAGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCCGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGGCCGAACAGTGGGACCTTCCGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTGAACGA                                                               >  2:150549/1‑250
                                                                                                                                                                                         ATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGCCGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCCACGCAGGTT                                                          >  1:243712/1‑251
                                                                                                                                                                                             gGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGTAAACTATGGTGGACCACGCGGTGAATGCGATGCTTAGCTCCGACGATAGCGCAGGTGGCATTCAGTTCGATAAAGACCGCCAGGCCTTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTA                                                      <  2:427878/250‑1
                                                                                                                                                                                               GCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATG                                                    >  1:190178/1‑251
                                                                                                                                                                                                   gcgGGAAAAAGCTGGTATTGTGGCAAAAAACCCCCGTTCAAAATACGCGCTGATCTGACGCAGGAAACGATGGATTCCCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGA                                                <  2:23987/248‑1
                                                                                                                                                                                                        AAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGCGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGACCTGGCTGGTCAACGAAGGTTCCTATGCTGAAAGCG                                           >  2:37693/1‑251
                                                                                                                                                                                                           AAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTC                                        >  1:425129/1‑251
                                                                                                                                                                                                              CTGGTATTGTTGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGAAGGTCGCATTCAGTTCGATAAAGACCGCCCGGCCGTTGACGCCTTTCTTGCGACGCATGTGAGTCCGAACAGTGTGACCTTCAGTAGCCATCAGCAGCGCCTGCACATGCTGGTCACCGAAGGgtcgaacagatgatcaatatagt                                     >  2:401500/1‑228
                                                                                                                                                                                                               TGGTATTGTGGAAAAAAACCCCAGTTCATATGACGATCTGATCTGACGCCGGAAACGAGGGATTTCCACGCGTTGAATGCGATGCTTAACCTCTACGATAGCGCCGGTCGCATTCAGTTCGTTAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGGGCGTCCGAACAGTGTGACCTTCAGTATTCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTA                                     <  2:382215/250‑1
                                                                                                                                                                                                                   ATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTTTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGC                                <  1:485886/250‑1
                                                                                                                                                                                                                     gGTGGCAAAAAACACCCGTTCAGAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCT                               <  2:392930/249‑1
                                                                                                                                                                                                                         GCAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCT                          >  1:248664/1‑251
                                                                                                                                                                                                                          CAAAAAACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTC                         <  1:507576/251‑1
                                                                                                                                                                                                                               AACACCCGTTCATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGAC                    >  1:87230/1‑251
                                                                                                                                                                                                                                          ATAATCCGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGATCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGATACTCTCGAGACTTTGTCATTAC         >  2:505156/1‑251
                                                                                                                                                                                                                                          ATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTAC         >  1:126240/1‑251
                                                                                                                                                                                                                                          ATAATACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATACGCTGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCAATAACGACCGCCAGGCAGTTGACGCCTTTATTGAGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCACCGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTAC         >  1:78824/1‑251
                                                                                                                                                                                                                                             tTACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACCCATTTGCGTCCGAACAGTGTGACCTTAATTAGAAAGCAGCAGCGCCTGAACTGGCGGGTCAACGAAGGTTACTATGAGGAAAGCGTTCTTTATCGCAACTCTCCCGACTTTGTCATTACGCg      >  2:24991/2‑250
                                                                                                                                                                                                                                               ACGCGCTGATCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTG     <  1:354844/250‑1
                                                                                                                                                                                                                                                 GCGCTGATCTGACGAAGGAAACGAGGGATGACCACGCGCTTAATGCTATGCTTAACCTATGCGATAGCGCAGGTCGCATTCAGTGCGATAAAGACCGCCAGGCCGTTGACGCCTGTAGTGCGAATCATGTGCGTCCGGACAGTGTGCCCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCGACTCTCGCGACTTTTTCATGATGCTGTTT  <  2:558039/251‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
TGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAATTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2795406‑2795655
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTGTTT  >  NC_000913/2801373‑2801614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.