Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,413,092	C→T	A48A (GCG→GCA)	intR ←	putative integrase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,413,092	0	C	T	100.0%	137.7 / NA	39	A48A (GCG→GCA)	intR	putative integrase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (22/17);  total (22/17)

ATAACGAATATGTGATATCGGGGTACTTTCACAAATTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATTTAGACATATCATGAGTCTTTGATAAACTGATTTATCTTTGGATAGTTGTACCAGATAATCCCTCGTTTGCTGTCTGGCTTACCTAAAGGAGATACTCGTTTGA  >  NC_000913/1412852‑1413331                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                ataACGAATATGTGATATCGGGGTACTTTCACAAATTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAAt                                                                                                                                                                                                                                       <  2:2807/251‑1 (MQ=255)   aaCGAATATGTGATATCGGGGTACTTTCACAAATTATTATTCTGAGTTTTTTTAATTGTGATTTCGTTTTCTGCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCTCCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAAtt                                                                                                                                                                                                                                      <  2:439883/250‑1 (MQ=255)          atGTGATATCGGGGTACTTTCACAAATTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCt                                                                                                                                                                                                                              >  1:19845/1‑251 (MQ=255)            gttatatCGGGGTACTTTCACAAATTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATAGCACAAAGCTCTCCGAACGTTTTTATGACTCGCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCtt                                                                                                                                                                                                                             <  1:459628/247‑1 (MQ=255)              gATATCGGGGTACTTTCTCAAATTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTTATTGTGTTGGTTGTTAACTCTGTCTCGTGTATTTTTGTTCAGATATCACAAAGCTCTCCGAACGTGTTTATGACTCTCGTTGTCTCCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCtttt                                                                                                                                                                                                                           <  2:293/250‑1 (MQ=255)               atatCGGGGTACTTTCACAAATTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTTTCACCATTTTTGCCCCAGAGCTGGACTGGGAAAAACGTCTTAAGTACTCAAATTCACCGCAGTTTATTTCCTGCANTATCACTGCTATTACATTTCCGTCCttttt                                                                                                                                                                                                                          >  2:232357/1‑250 (MQ=255)                              cacaAATTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCTTTTTTAATATTACTGTTTGt                                                                                                                                                                                                           >  2:361546/1‑250 (MQ=255)                              cacaAATTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGt                                                                                                                                                                                                           <  1:125536/250‑1 (MQ=255)                                caAATTATTATTCTGAGTGTTTTTAATTTTGATTTCGTTTTCTTCATTGTGTGTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCTCCGGAGTTTATTTCATGAACTATCAGTTCTCTTAAATTTCCGGCCGTTTTAATATTACTGTTTGTAAt                                                                                                                                                                                                        <  2:517847/251‑1 (MQ=255)                                  aaTTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAAtct                                                                                                                                                                                                      >  1:29891/1‑251 (MQ=255)                                   attattattCTGAGTGTTTTTACTTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAAtctc                                                                                                                                                                                                     >  1:403837/1‑251 (MQ=255)                                      attattCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCa                                                                                                                                                                                                  <  1:643/251‑1 (MQ=255)                                                     tttAATTGTGATTTCGTTTTATTCATTGTGTTTGTTGTTAACCGTGTCTCTTTAATTTTTGTCTAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCCTTTTTGATCAAGTGCTGGTCTGGGGAAAACGTCTTAAATGCTCAAATTCACCGTAGTTTATTTCATGAACTATCAGTGCTCTTACATTTTCGGCATTTTTAATATGATTGTTTGTAATCTCCCAACCTTTTAATtttt                                                                                                                                                                                    <  2:215920/250‑1 (MQ=255)                                                        aaTTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCg                                                                                                                                                                                >  1:249006/1‑251 (MQ=255)                                                            gtgATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACAt                                                                                                                                                                            <  2:279857/251‑1 (MQ=255)                                                                 ttCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGttt                                                                                                                                                                       >  1:285617/1‑251 (MQ=255)                                                                          ttcATTGTGTTTGTTGTTAACTCTGACTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATAATCAAATTCACCGGAGTTTATTTCCTGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGaa                                                                                                                                                               >  1:319034/1‑250 (MQ=255)                                                                            cATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAAc                                                                                                                                                             <  1:89592/250‑1 (MQ=255)                                                                                       ttgttAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATg                                                                                                                                                 >  1:163908/1‑251 (MQ=255)                                                                                           tAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGa                                                                                                                                              <  1:304548/250‑1 (MQ=255)                                                                                           tAACGCTGTCGCTTTCAGTTTTGTCCAGATATCACAAAGCTATCCGAACGTTTTTATGACTCTCGTTCTCACCATTTTTGCCCCAGTGCTGGACTGTGGAAATCGTCTTAAATACTCCAATTCACCGGAGTTTATTTCATGAACTATCAATGCGCTTAAATTTCCTGCCTTTTTAATATTACTGTTTGTCATTTCCCATCCTTTTCATGTTTCCCGACATAGTTTTCCTGGAAACCTGAACCAGagcact                                                                                                                                              >  2:351145/1‑245 (MQ=255)                                                                                            aaCTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAACTACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAAt                                                                                                                                            >  2:140311/1‑251 (MQ=255)                                                                                                ctGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGAc                                                                                                                                                                              >  1:242449/1‑213 (MQ=255)                                                                                                ctGTCTCTTTAATTTGTGGCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGAc                                                                                                                                                                              <  2:242449/213‑1 (MQ=255)                                                                                                        ttAATTTTTGTCCAGATAGCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACctc                                                                                                                                 <  1:317900/250‑1 (MQ=255)                                                                                                                                                    gACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGTACTGGGGAAAACGTCTTAAATACTTAAATTCACCGGAGTTTATTTCATGACCTATCAGTGCTCTTAAATTGCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACCCCGGTTGGTAATTTAGACATATCATGAGTCTTTg                                                                                    <  2:356851/251‑1 (MQ=255)                                                                                                                                                    gACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATTTAGACATATCATGAGTCttt                                                                                     <  1:364365/250‑1 (MQ=255)                                                                                                                                                           gTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATTTAGACATATCATGAGTCTTTGATAAACt                                                                             >  2:115511/1‑251 (MQ=255)                                                                                                                                                                    aTTTTGGCCCCCGTGCTTGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTACATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATTTAGACATATCATGCGTCTTTGATAAACTGATTTATCt                                                                    >  2:35161/1‑251 (MQ=255)                                                                                                                                                                            cccAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATTTAGACATATCATGAGTCTTTGATAAACTGATTTATCTTTGGAt                                                              >  1:470596/1‑249 (MQ=255)                                                                                                                                                                                     ggACTGGGGACAACGTCTTAAATAATCAAATTCACCGGAGTTTATTTCATGAACTATCAGTGATCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGACTGTATCTACCTCTAATCTCGCCACCTGTTGGTAATTTAGACATATCATGAGTCTTTGATAAACTGATTTATCTTTGGCTAGTTGTAcc                                                     >  1:432378/1‑249 (MQ=255)                                                                                                                                                                                                                 aaTTCACTGGAGTTTATTACATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCTCAGCCTTTTACTGTTTCCCGACATCGTTTTCCTAGAAACATGAACCAGATGCGAATGTATATACCTCTAATCTCGACTACTGTTGGTAATTTACACATATCCTGAGTCTTTGATACACTGATTTATTTTTGTATAGTTGTCCCAGATAATCCCTCATTTGCTGTCTGTCttcc                       >  2:10076/1‑249 (MQ=255)                                                                                                                                                                                                                  aTTCACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATTTAGACATATCATGAGTCTTTGATAAACTGATTTATCTTTGGATAGTTGTACCAGATAATCCCTCGTTTGCTGTCTGGCTTAcc                      >  1:166129/1‑251 (MQ=255)                                                                                                                                                                                                                     cACCGGAGTTTATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTACTCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAAATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATTTAGACATATCATGAGTCTTTGATAAACTGATTTATCTTTGGATAGTTGTACCAGCTAATCCCTCGTTTGCTGTCTGGCTTACCTa                    >  1:21401/1‑250 (MQ=255)                                                                                                                                                                                                                               tATTTCATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATTTAGACATATCATGAGTCTTTGATAAACTGATTTATCTTTGGATAGTTGTACCAGATAATCCCTCGTTTGCTGTCTGGCTTACCTAAAGGAGATACt         >  1:378044/1‑251 (MQ=255)                                                                                                                                                                                                                                    cATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACctct                                                                                                                                >  1:372214/1‑127 (MQ=255)                                                                                                                                                                                                                                    cATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACctct                                                                                                                                <  2:372214/127‑1 (MQ=255)                                                                                                                                                                                                                                    cATGAACTATCAGTGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACTCCTGTTGGTAATTTAGACATATCATGAGTCTTTGATAAACTGATTTATCTTTGGATAGTTGTACCAGATAATCCCTCGTTTGCTGTCTGGCTTACCTAAAGGAGATACTCGtt     <  1:339939/250‑1 (MQ=255)                                                                                                                                                                                                                                       gAACTCTCAGTGCTTTTAAATTTCCGGCCTTTTTAATATTAATGTTTGTAATCTACCAGCCTTTTAATGTTTCCCGAAATCGTTTTCATCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATATAGACATATCATGAGTCTTTGATAAACTGATTTATCTTTGGATCGTTGTACCAGATAATCCCTCGTTTGCTGTCTGTCTTACCTAAAGGAGATACTCGTTTGa  >  2:226159/1‑250 (MQ=255)                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                ATAACGAATATGTGATATCGGGGTACTTTCACAAATTATTATTCTGAGTGTTTTTAATTGTGATTTCGTTTTCTTCATTGTGTTTGTTGTTAACTCTGTCTCTTTAATTTTTGTCCAGATATCACAAAGCTCTCCGAACGTTTTTATGACTCTCGTTGTCACCATTTTTGCCCCAGTGCTGGACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGCTCTTAAATTTCCGGCCTTTTTAATATTACTGTTTGTAATCTCCCAGCCTTTTAATGTTTCCCGACATCGTTTTCCTCGAAACATGAACCAGATGCGAATGTATCTACCTCTAATCTCGACACCTGTTGGTAATTTAGACATATCATGAGTCTTTGATAAACTGATTTATCTTTGGATAGTTGTACCAGATAATCCCTCGTTTGCTGTCTGGCTTACCTAAAGGAGATACTCGTTTGA  >  NC_000913/1412852‑1413331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑