| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,048,596 | G→A | G32G (GGC→GGT) | gfcC ← | capsule biosynthesis GfcC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,048,596 | 0 | G | A | 96.4% | 194.2 / NA | 56 | G32G (GGC→GGT) | gfcC | capsule biosynthesis GfcC family protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (23/31); minor base C (1/1); total (24/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGTGATATTGAGATTGAGTAACTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCGCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGTTTTTCTGGCCGCGTGGAAGTCACCTCTTCCTGC > NC_000913/1048353‑1048838 | aGTGATATTGAGATTGAGTAACTGCTGGCGCACGGACTTAATAGTTGCCGCCACATAGTAGTAAGCTTCCGATTCCCAGGAGGCAAGCTGTGCCATGACATGTTGGGAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCGGTTGTGGTGGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAG‑GTGCTGTTGGTCCCCAGGc > 2:182133/1‑250 (MQ=255) gATATGGAGATTGAGTAACTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGAt < 2:84172/251‑1 (MQ=255) ttgagattgagTAACTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAAt > 1:307529/1‑251 (MQ=255) ttgagTAACTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGGCAc > 2:401815/1‑251 (MQ=255) gagTAACTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCAcc < 1:289046/250‑1 (MQ=255) aCTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCt > 1:505184/1‑251 (MQ=255) ctgGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTgcg > 1:238337/1‑251 (MQ=255) atcgcgcACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCCGAGGCGTTCGCGCAGTTGCGGTTGAGTCACCAACTGG‑CATACAATTTCCCCGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCCCCCCTCCTTgcg > 2:399846/4‑251 (MQ=255) cGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGc > 1:317246/1‑250 (MQ=255) gTTGCCGCCGCATCTTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTGGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCAt < 2:466664/251‑1 (MQ=255) cgtcgtCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCTCCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACg < 1:219921/251‑1 (MQ=255) cgtcgtCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAACGGCATGGGGTGTCATTACGTCAAGTACg > 2:2463/1‑251 (MQ=255) cgtcgtCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTAc < 1:350463/250‑1 (MQ=255) gtcgtcAGCTTCTGCTTCCCAGGAAGCAAGCGGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAGAGTGT‑CTGTTGTGCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGc < 2:417161/251‑1 (MQ=255) cAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGc < 1:420505/250‑1 (MQ=255) gCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAAt < 1:261233/251‑1 (MQ=255) ggAAGCAAGCTGGGCCATGACATGTTGGTAGNCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTa < 2:238337/251‑1 (MQ=255) gcaagcTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAAttt < 1:18964/251‑1 (MQ=255) gcaagcTGTGCCATGACATGTTGGTAGTCTTNAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAAttt < 2:237925/251‑1 (MQ=255) caagcTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTGCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGAGTGCGCAGTTGCGGGTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCTTTCCTTGCGCAAAGGCATGGGGTGTCATTTCGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTa < 2:316895/251‑1 (MQ=255) ggcTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGGGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGACCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTGCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATCCGACTGTAATTTAtt < 2:414744/250‑1 (MQ=255) tgagCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTAGGTCAGCAAGGCAACAGGCCACCAGAGGCGCTCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCCTGGGGTGTCATTACGTAAAGGACGCTGGCAATGAAATACGCCTGTAATTTATTCAt > 2:20773/4‑251 (MQ=255) ccATGACATGTTGGTAGTCTTTAAGCGCTTTNGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTg < 2:244429/251‑1 (MQ=255) aTGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTc > 2:505124/1‑168 (MQ=255) aTGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTc < 1:505124/168‑1 (MQ=255) tGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCCCCAGAGGCGATCGCGCCGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCCGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGttt > 2:415511/1‑250 (MQ=255) gTTGGTAGTCTTTAAGCGCTTTAGCTTTCGNCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTa < 2:247928/250‑1 (MQ=255) ggTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGa > 1:257649/1‑250 (MQ=255) gTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGAGCAGTTGCGGTTGTGGCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAAATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTAAGATGTCAATGAAATACGACTGTAATTTCTTCATGTAGCGGGTTTAAGaa > 2:42814/1‑250 (MQ=255) ttAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTc < 1:381810/248‑1 (MQ=255) ttAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCa < 1:72330/249‑1 (MQ=255) ttAAGCGCATTAGCTTTCGCCGCAGAGTCGNTCAGAGAGGCACCAGGCCACCATAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGTGCCAACGGAAAGTGT‑CTGGTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATGCGACTGTAATTTATGCATGGTGCGGGTGTAAGAAACGTCAt < 2:240047/250‑1 (MQ=255) tAAGGGCTTTAGCTGTCGCCGCAGAGGCGGTCGTCAAGGCGCCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGGGTCACCAACTGGACA‑ACATTTTCCATGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGTTGTCATTACGTAAAGTACGCTGGCAATTAAATACGACTGTAATGTATTCATGGTGCGGGTTGAGGAAACGTCAtt < 2:309861/250‑1 (MQ=255) aagctcgttAGCTTTCGACGCAGATACGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTGGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGTCTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTc < 2:48235/244‑1 (MQ=255) aGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCt < 1:164746/251‑1 (MQ=255) tAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGa < 2:406802/250‑1 (MQ=255) ttCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑AAATTTTCCACGGGGCCAACGGAAAGGGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACGGTAAGTTATTCATGGTGCGGGGTTAAGAAAAGTTATTTCTAACGGAATAAcc > 2:444090/1‑251 (MQ=255) ccgcAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGGCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTg > 1:531779/1‑251 (MQ=255) cgcAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGGCTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTgc < 1:399846/251‑1 (MQ=255) ggTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACAt > 1:403059/1‑251 (MQ=255) ggTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGAAATTTATTCATGGTGCGGGGTTAAGAAACGTCATTTCTACGGGACTAACCCCTGCGCCTAACAt > 1:332031/1‑251 (MQ=255) aGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGAc < 2:413754/251‑1 (MQ=255) accaGAGGCGATCGTGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCt > 1:445381/1‑251 (MQ=255) accaGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATTAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCt < 2:306391/251‑1 (MQ=255) ccaGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTg > 1:405551/1‑251 (MQ=255) gagGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGcc > 1:391811/1‑251 (MQ=255) agGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGccc > 1:95854/1‑250 (MQ=255) ggCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGCCTTTGACGAACCTGGcc > 1:266335/1‑249 (MQ=255) gATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATAAGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGt > 2:538002/1‑249 (MQ=255) gcgcgCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGcc < 2:495259/250‑1 (MQ=255) ccAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAAGCGCCCCAGAATGTGtttt < 2:445381/251‑1 (MQ=255) ccTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCCCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGcc < 2:307529/250‑1 (MQ=255) tttCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttg > 1:88137‑M1/1‑243 (MQ=255) ttCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttga < 1:42814‑M1/250‑9 (MQ=255) gttgttCACCAGTCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGTCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgactgagtaaccagacagttgatgtgca < 2:528357‑M1/250‑35 (MQ=255) gttgttCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGattgttgactgagtaaccagacagttgatgtgc < 1:434480‑M1/249‑34 (MQ=255) | AGTGATATTGAGATTGAGTAACTGCTGGCGCACGGATTTAATCGTTGCCGCCACATCGTCGTCAGCTTCTGCTTCCCAGGAAGCAAGCTGTGCCATGACATGTTGGTAGTCTTTAAGCGCTTTAGCTTTCGCCGCAGAGTCGGTCAGCAAGGCACCAGGCCACCAGAGGCGATCGCGCAGTTGCGGTTGTGTCACCAACTGGACA‑ACATTTTCCACGGGGCCAACGGAAAGTGT‑CTGTTGTTCGCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCACTGTTTTTCTGGCCGCGTGGAAGTCACCTCTTCCTGC > NC_000913/1048353‑1048838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |