| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,951,823 | T→C | intergenic (+1266/‑378) | ilvX → / → ilvM | uncharacterized protein IlvX/acetolactate synthase II subunit IlvM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,951,823 | 0 | T | C | 97.1% | 202.9 / NA | 69 | intergenic (+1266/‑378) | ilvX/ilvM | uncharacterized protein IlvX/acetolactate synthase II subunit IlvM |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (25/41); minor base A (1/1); total (27/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGTTTAGGTACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCACAAGTCGCGCGACCGAACGA‑TACCGTTGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTTCAGGAACGATACAGCGAAACCACCCTTACTGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCATGGCCAACACATCACCCGGAAAGACC > NC_000913/3951581‑3952064 | gccTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTa < 1:401813/249‑1 (MQ=255) ccTGGCGTTACGACCATCCCGGTGACGCTATATCCGGGCGGGTGTTGTTAAAACAACTGTCGGTTCGGAACCCTGGGTATTGCGTGTTGACCACAGAGGGGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCTCCGTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTGTATCGGCGGAGGTTGGCGCGCATGTCGCGCGACCAAACGA‑TATCGTCGTCTGTAtc < 2:541507/251‑1 (MQ=255) ggCGTTACGACCATCCCTGTGACGCTATCTANGGGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTcc < 2:242759/251‑1 (MQ=255) gTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGt < 1:447870/251‑1 (MQ=255) gACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTAtctc < 1:97015/242‑1 (MQ=255) ccATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGct < 1:144758/251‑1 (MQ=255) cATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGctc < 2:142169/251‑1 (MQ=255) cATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGctc < 1:251504/251‑1 (MQ=255) ggTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGCCCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTGTGCGCGCCAGTCCCACGACCAAACGA‑GACCGCCGGCCGTATCTCC‑GGTGACgggactttcc > 2:80256/1‑242 (MQ=255) tATCTACGCGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCCCCAGTCGCGCGGCCCAACGA‑TACCGTCGTCTTTATCTCCCGGT‑ACGGCTCTTTCATGATGaa > 1:227192/1‑249 (MQ=255) aCGCGCCGTTGTTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCa‑a < 1:84890/251‑1 (MQ=255) ccGTTGGTGTTAAAACAACTGTCAGATCGTAAACCTGCGGATTGCTTCGGGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCGCGTTCATGATGAA‑TGTGCA‑AGAGCt < 2:503743/251‑1 (MQ=255) cgttgtgtttAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTGACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTg < 1:517685/243‑1 (MQ=255) ttgttAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCAc > 1:90575/1‑251 (MQ=255) gttAAAACAACTGTCAGCTCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGcccc < 2:20769/250‑4 (MQ=255) gttAAAACAACTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCAcc < 2:186849/250‑1 (MQ=255) aaaaCAGCTGTCAGATCGTAAGCCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACTAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCAGGACCTCCAGCGGCTTAGGCACCATGGTTTTTGGTTTACCGGCGGCGGTTGGCGCTCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTGTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTa < 1:52671/250‑1 (MQ=255) aacaacTGTCAGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTaaaa < 2:477014/251‑1 (MQ=255) gtcagATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGc < 2:325118/247‑1 (MQ=255) tcagATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGGCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCC‑AGAGCTG‑GGCACCGTAAAACGCAAGc > 1:494076/4‑250 (MQ=255) aaCCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGGTGGCGCGCAAGGCGCGCGACCAAAAGA‑TACCGTCGGCTGTATCTCC‑GGTGGCGGCTCTTTCATGAAGAA‑TGTGCA‑AGAGCTG‑GGCCCCGGACAAAGCAAGCA‑GGTACC‑GTTg > 2:476189/1‑251 (MQ=255) cTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GGTACC‑GTTGaa > 1:178976/1‑250 (MQ=255) cgtcgtGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGGA‑TGTGCa‑a > 1:51039/1‑202 (MQ=255) cgtGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTc < 1:435751/250‑1 (MQ=255) cgtGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACAGCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTGCCGGCGGCGGTTGGCGCGCAAGGCGCGCGTCCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑TGCACCGTAAAACGCAAGCA‑GTTACC‑GTGGAAAATCATCTTACTc < 2:194474/250‑1 (MQ=255) gtGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGACCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAATCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCgg > 1:282927/1‑250 (MQ=255) gACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCCCC‑GGTGACGGCCCTTTCATGATGAT‑TGTGAA‑AGGGCTG‑GGCACCGGAAAAAGCAAGCA‑GGTACC‑GTTGAAAATCGTCTTACTccat > 2:104746/1‑247 (MQ=255) aCCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGAACAAAAGA‑TACCGGCGTCTGTATCTCC‑GGTGACGGCCCTTTCATGATGAA‑AGTGCA‑AGAGCTG‑GGCACCGTAAAAAGCAAGCA‑GGTACC‑GGTGAAAATCGTCTTACTCGAT‑a > 1:172685/1‑250 (MQ=255) cacaTATGTGGGGCTTCACCAGATGTGTGTCGCGCAGCCCATCGCCCTCCCTGTACCTGCAAATTTCATCGCCTTCAGCTGCTTAGGCACCTTGGTTTTTGGGTTACCGGTGGCGGTTGGCGCGCAAGTCGCGTTACCAAATGA‑TACCGTCGTCGTTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TCTGCA‑AGAGCTG‑GGCACCGTAAAACGAAAGCA‑GGTACC‑GTTGAAAATCGTCTTACTCgctatcc < 2:24403/251‑7 (MQ=255) aGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCCAGTCGCTCGACCAAACGG‑TACCGTCGTCTGTATCTTC‑GGTGACGGCTCTTTCATGATGAA‑AGTGCA‑AGAGCTG‑GGCACCGTAAAAAGCCAGCA‑GTTACC‑GTTGTAAATCGTCTTACTCGAT‑AAcccac > 2:103336/1‑248 (MQ=255) tgGGGCCGCACCAGATGTGGGCTGCGCAGCCCATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGAAGGCTCTTTCATTATGAA‑TGGGCA‑AGCGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGtt > 1:472240/1‑250 (MQ=255) ggggCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTGTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGGCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTAGTCGAT‑AACCAACGGTTAg < 2:451704/251‑1 (MQ=255) ggtgagcactggcagtgGACTGCGCAGCACATCGCCCCCCCCCGCCCGGAACATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGTCGCGCAAGTCGCGCGACCAAACGA‑TGCCGTAGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAACCGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAgg < 2:291835/237‑1 (MQ=255) agcaCCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAAACGTCTTACTCGAT‑AACCAACGGTTAGGGATg > 1:405724/1‑251 (MQ=255) ccAGATGTGGGCTGCGCAGCACAGCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTTAAAAGCGTTTTACTCGAT‑AACCAACGGTTAGGGATGGTTc < 1:140276/251‑1 (MQ=255) gATGTGGGCTGCGCAGCACATAGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGAGGCGGGTGGCGCGCCAGTCGAGCGACCAAACGAGTAC‑GTCGGCCGTATCTCC‑GGGGAAGGGTCTTTCATGATGAAATG‑GAA‑AGAGATGTGGCAC‑GTAAAACGCAAGCA‑GATACC‑GGTGAAAAACGTCTTTCCCGAT‑Aaacaacagctggggggggttcgac > 2:298280/1‑233 (MQ=255) gtgGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGGCTGTATCTCC‑GGTGACGGCTCTTTTATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGGAAAACGCCAGCA‑GGTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑t > 1:527505/1‑251 (MQ=255) ggCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGGTGGCGCGCAAGTCGCGCGACCAAAAGA‑TACCGTCGATTGTATCTCC‑GGGGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGATG‑GGCACCGCAAAACGCAAGCA‑GTTAAC‑GTTGAAAATCGACTTACTCGAT‑AAACAAAGGGTAGGGATGGTTTGACAA‑Tgg > 1:229767/1‑250 (MQ=255) cgccgccaatctccccctctctcccGAAAAATGTCAGCACTTCAAGCGGCTTATGCACCAGGGGTTCTGGTTTACCGGCGGCGGTTTGCGCGCAAGTCGCGCGACCAAACGA‑TAACGTCGTCTGTATCTCC‑GGTGACGGCGCGTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGgcagcat < 2:277822/229‑2 (MQ=255) cgcAGCACATCGCCCACCCTCGCCTGGAAAAATTCATCCCCTCCATCGGCTTAGTAACTATGGGTTTTGGTTTACCTGCGGCGGTTGGCTCGCAAGTCTCGCGACCATACGG‑TGCCGTCGTCTGTATCTCC‑GGTTACGGCTCCTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTAGC‑GTTGAAAATCGTCTTACGCGAT‑AACCAACGGTTGGGGATGGTTCGACAA‑TTGCAGCaa < 2:175166/251‑1 (MQ=255) gcagcaCATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAAc < 1:392908/251‑1 (MQ=255) gcagcaCATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGGTGGCGCGCAAGTCGCGCGACCAAACGA‑TAACGTCGTCTGTATCTCC‑GGGGACCACTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGAACGCA‑GTTACC‑GTTGAAAAACGTCTTACTCGCT‑AACAAACGGTTAGGGCTGGATCGACAA‑TGGCAGAAAc > 2:378664/1‑251 (MQ=255) gcaCATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGt < 1:502519/251‑1 (MQ=255) acaTCGCCCACACTCGCCCGGAATATTGCATCACCGCCAGCGGTTTAGGCACCATGGGTGTTGGTTTACCGGCGGCGGTTGGCGCGCAATTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTT‑GGCACCGTAAAACGCAAGCA‑GTTGCC‑GTTGAAAATCGTCTTACGCGAT‑AACCAACTGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGttt < 1:495761/251‑1 (MQ=255) cagcgcccgcccTCGCCTGGAAAATTTCATCACCTCCAGTGGCTTATGCACCATGGGTGTTGGTGTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGGGACTGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GGTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑GGGCAGCAACTGtttt < 2:500449/240‑1 (MQ=255) ccGGAAAATTTCAGCCCCTCCATGGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGGTTGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCGCCGTAAAACGCAAGCA‑GTTACC‑GTTTAAAATCGTCTTACTCGAT‑AATCAACGGGTAGGGATGGTTCGATTT‑TGGCAGCAACTGTTTTTCCAGTAACtatatag < 2:429795/251‑4 (MQ=255) cGGAAAATTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGc < 1:512591/251‑1 (MQ=255) ggAAAATTTCATCACCTCCAGCGGCTTAGGTACCATTGGTTGTGGTTTACCGGCGTCGGTTGGCGCGCAAGGCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGTACCGTAAAACGCAAGCA‑TTTACC‑GTTTAAAATCTTCTTACTCGAT‑TACCAACGGTTAGGGAGGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCg < 1:134587/251‑1 (MQ=255) aaaaTTTCATCACCTCCAGCGGCTGAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGaa < 2:351471/251‑1 (MQ=255) aTTTCATCACCTCCAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGGTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGGGACGGCCCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGGCCCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AAACAACGGATAGGGATGGTTCGACAA‑TGGCAGCAAACGTTTTTTCAGGaaagaaatagcggaacc > 1:223598/1‑236 (MQ=255) aCCTCCCGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGCCGCGCGACCAAACGA‑TACCGGAGCCTGTAACTCC‑GGAGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCCA‑CACGGTACC‑GGTGAAAATCGTCTTACTCGATCAACAAACG‑TTAGGGAAGGTTCG‑CAACTGGCAGCAACTGTTTTTCCAggcgagataagatcggcagagcatcgg > 2:478765/1‑226 (MQ=255) aCCTCCAGCGGCTTAGGCACCATGGGTTTTGGTGTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATa < 1:478765/233‑1 (MQ=255) ccAGCGGCTTAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGGCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGAt < 2:307672/251‑1 (MQ=255) ggggcttAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAAc < 2:223543/246‑1 (MQ=255) ggcttaagcaCCATGGGTTTTGGTTTACCGGCGGCGGTTGGGGCGGAAGACCCGCGTCCAAACGT‑TACCGTGGGCGGTATCTCC‑GGGGCCCGATCTTTCATGTTGGA‑TGTGGACAG‑GCTG‑GGCACCGGAAAAACCAAGCA‑GTTACCAGTGGAAAA‑CGGCTTACCCGAT‑AACCCACGGTTAGGGGTGGTGTGACAA‑TGGCCACAACTGTTTTTCCACGGACGAGATAGCGGAACCACCCTTACCGATacacc > 2:477413/10‑247 (MQ=255) gcttAGGCACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGGCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGGGCA‑AGAGCTG‑GGCACCGTAAAAAGCAAGCA‑GTTACC‑GTTGGAAAACGGCTTACTCGAT‑AACCAACGGTTAGGGGTGGGTTGAAAA‑TGGCAACAAATGGTTTTCCAGGGACGATATAGCGAAAACACCCTTACCGATAAcccc > 2:153931/3‑251 (MQ=255) aTGGGTTTTGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCAt < 1:188442/251‑1 (MQ=255) ttGGTTTACCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGc < 1:421657/250‑1 (MQ=255) aCCGGCGGCGGTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGcc < 1:476189/250‑1 (MQ=255) ggcggcggTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCg < 2:178976/251‑1 (MQ=255) gcggcggTTGGCGCGCAAGTCGCGCGACCAAACGA‑TTCCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCTCCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCgg < 1:293882/251‑1 (MQ=255) ggTTGGCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATcc > 1:128251/1‑251 (MQ=255) ggCGCGCAAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCCTgg < 1:425910/251‑1 (MQ=255) gcaAGTCGCGCGACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGAGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGCGATGGTTCGACAA‑TGGCAGCCACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCTTGTTAGCCAGCGCCTTCGGCATCCCAGGCCAac > 2:385785/2‑251 (MQ=255) cgcgACCAAACGA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCCTGGCCAACACATCAcc > 2:43731/1‑251 (MQ=255) cgcgACCAAACGA‑TACCGTCGTCTGTATCGCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCCTGTCCAACACATCAcc < 1:263510/251‑1 (MQ=255) caaaCGA‑TACCGTCGCCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCCTGGCCAACACATCACCCgtaa > 1:458041/3‑247 (MQ=255) gA‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCCTGGCCAACACATCACCCGTAAAGAcc > 2:542309/1‑250 (MQ=255) a‑TACCGTCGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCCACTGTTTTTCCAGGAACGATATAGCGAAACCACCCTTACCGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCCTGGCCAACACATCCCCCGTAACGAcc > 2:347633/1‑249 (MQ=255) | TCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGTTTAGGTACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCACAAGTCGCGCGACCGAACGA‑TACCGTTGTCTGTATCTCC‑GGTGACGGCTCTTTCATGATGAA‑TGTGCA‑AGAGCTG‑GGCACCGTAAAACGCAAGCA‑GTTACC‑GTTGAAAATCGTCTTACTCGAT‑AACCAACGGTTAGGGATGGTTCGACAA‑TGGCAGCAACTGTTTTTTCAGGAACGATACAGCGAAACCACCCTTACTGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCATGGCCAACACATCACCCGGAAAGACC > NC_000913/3951581‑3952064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |