Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,518,434 Δ81,761 bp [ykiE]yjjA 74 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4518434 4600194 81761 55 [0] [1] 56 [ykiE]–yjjA [ykiE],insA7,yjhU,yjhF,yjhG,yjhH,yjhI,sgcR,sgcE,sgcA,ryjB,sgcQ,sgcC,sgcB,sgcX,yjhP,yjhQ,topAI,ythB,nanS,nanM,nanC,fimB,fimE,fimA,fimI,fimC,fimD,fimF,fimG,fimH,gntP,uxuA,uxuB,uxuR,yjiC,ytiC,ytiD,idlP,iraD,hypT,iadA,yjiG,yjiH,kptA,yjiJ,yjiK,ytiA,yjiL,yjiM,yjiN,mdtM,ytiE,yjiR,yjiS,yjiT,mcrC,mcrB,mcrB,symE,symR,hsdS,hsdM,hsdR,mrr,yjiA,yjiX,btsT,tsr,lgoT,lgoR,lgoD,opgB,yjjA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 45184330 (0.000)55 (0.850) 50/486 0.1 100% coding (62/69 nt) ykiE protein YkiE
?NC_000913 4600195 = 0 (0.000)intergenic (‑6/+43) yjjA/dnaC DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC

AAGCGACTCGAACGTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTATAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTATTATTGACATCCTCACTGCCCTAAAGGATGGGGATTTCGGTAATGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCCTTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGT  >  NC_000913/4518188‑4518679
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      
aaGCGACTCGAACGTTAAGGAAGCTGTGGTAGTGGCGCGGGCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActca                                                                                                                                                                                                                                                    >  1:188571‑M1/1‑246 (MQ=255)
         gAACGTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACNCATGATGTGGTCTGCTActcaaggtggaatt                                                                                                                                                                                                                                          >  2:261185‑M1/1‑237 (MQ=255)
          aaCGTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGCGCATCAAAAGGTAATTATCACGTAGTCAGATTAATATGAGAATGGATATCATTACAATTGGAAATAAAATTGTTTCCAGTAGACATTTTAAACATGTTGTTTTTCTAAGTGTAGTACGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGATTCATGATGTGGTCTGCTActcaaggtggaattg                                                                                                                                                                                                                                         >  2:116949‑M1/1‑236 (MQ=255)
               tAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtc                                                                                                                                                                                                                                     <  2:142817‑M1/250‑20 (MQ=255)
                     aGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgggtcgcagtat                                                                                                                                                                                                                              >  1:279526‑M1/1‑225 (MQ=255)
                      gCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtat                                                                                                                                                                                                                              >  2:219670‑M1/1‑224 (MQ=255)
                            gTAGTGGCGCGGTCAGACATGCGGATTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTTGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCGAAGTGTTGTAAGGTAGGTATAAAAAGGGATGGAGCCTCTGCTTCTGGCATGTGTCGTTCAGAAGGACTCTTGATGGGGTTTTCTActcaagttggaattgtgtcgcagtataccgcc                                                                                                                                                                                                                        <  1:453180‑M1/250‑33 (MQ=255)
                                tGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaa                                                                                                                                                                                                                    >  1:80152‑M1/1‑214 (MQ=255)
                                     cgGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacgggg                                                                                                                                                                                                              <  2:461918‑M1/251‑43 (MQ=255)
                                            aCATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaat                                                                                                                                                                                                        >  1:493135‑M1/1‑202 (MQ=255)
                                                       gCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGGATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatacgctttacct                                                                                                                                                                                             <  2:188571‑M1/250‑60 (MQ=255)
                                                        cATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgt                                                                                                                                                                                           >  1:224934‑M1/1‑190 (MQ=255)
                                                           cAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttac                                                                                                                                                                                        <  2:283618‑M1/251‑65 (MQ=255)
                                                            aaaaGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacc                                                                                                                                                                                       <  1:287429‑M1/251‑66 (MQ=255)
                                                                                tCATATTAATATGAGAATGGATATCATTACCATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGAATAAAATGGGATGGAGACTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaagggggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccgactacggtagctatccc                                                                                                                                                                    >  2:345437‑M1/1‑166 (MQ=255)
                                                                                  atatTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggt                                                                                                                                                                             >  2:202864‑M1/1‑164 (MQ=255)
                                                                                  atatTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggt                                                                                                                                                                             <  1:202864‑M1/239‑76 (MQ=255)
                                                                                  atatTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggatacggtagctatcccagt                                                                                                                                                                 <  2:448510‑M1/251‑88 (MQ=255)
                                                                                   tatTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattactactatttacctgttacccggctacggtagctatcccagtt                                                                                                                                                                >  2:281855‑M1/1‑163 (MQ=255)
                                                                                        atatGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaagttggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaaga                                                                                                                                                           <  1:376557‑M1/251‑94 (MQ=255)
                                                                                          atGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttga                                                                                                                                                              >  1:261935‑M1/1‑156 (MQ=255)
                                                                                               aaTGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtatacagccagaaacggggattaatactctttacctgttacccggctacggtagctatcacagttgaagttcacccc                                                                                                                                                    >  2:431161‑M1/1‑151 (MQ=255)
                                                                                                     tATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaac                                                                                                                                               <  1:320773‑M1/250‑106 (MQ=255)
                                                                                                              aaTTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaaaggggattaatactctttacctgttacccggctacggtagctatcccagttgcagatcacccacaaactgttaccc                                                                                                                                       >  2:80250‑M1/1‑136 (MQ=255)
                                                                                                                          aaTTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtc                                                                                                                         >  1:82805‑M1/1‑124 (MQ=255)
                                                                                                                              gTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatc                                                                                                                     >  1:66230‑M1/1‑120 (MQ=255)
                                                                                                                                        gACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaagggggaattgggtcgcagtataccgccagcaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaacggttacccaggcgcatacggtccatcacgcgttcgc                                                                                                           >  2:278438‑M1/1‑110 (MQ=255)
                                                                                                                                              attaACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagc                                                                                                      >  2:118529‑M1/2‑104 (MQ=255)
                                                                                                                                                 aaCATGGTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTTGCATGTGTCGGTCAGAATGAATCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttaccgggctacggtagcgatcccagttgaatataacccacaaactgttccccaggcgcatccggtccatcacgcgttcgcccagcacat                                                                                                  >  2:396484‑M1/1‑101 (MQ=255)
                                                                                                                                                        tgttTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgtccagcaacttggtca                                                                                            <  2:129962‑M1/250‑157 (MQ=255)
                                                                                                                                                          tttttCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatct                                                                                         >  1:402398‑M1/1‑92 (MQ=255)
                                                                                                                                                                    tgttgtAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatatt                                                                               >  1:157052‑M1/1‑82 (MQ=255)
                                                                                                                                                                     gttgtaaggtAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatatt                                                                               >  1:145276‑M1/5‑81 (MQ=255)
                                                                                                                                                                        gtaaGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactg                                                                           >  1:43983‑M1/2‑78 (MQ=255)
                                                                                                                                                                          aaGGTAGGTATAAAATGGGATGGCGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatctcccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgtt                                                                         <  1:11410‑M1/251‑176 (MQ=255)
                                                                                                                                                                                   ataAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgtccagcaacttggtcatctcttccatattactgttggtcagcat                                                                <  1:243529‑M1/251‑185 (MQ=255)
                                                                                                                                                                                        aTGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccgg                                                           >  2:396664‑M1/1‑62 (MQ=255)
                                                                                                                                                                                        aTGGGAAGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggacttgagtcgcagaataccgccagaaacggggattaatcctctttacctgttacccggcgacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcacagcaacttggtcctctcttccatattactgttggtcaacatcccgg                                                           >  1:252490‑M1/1‑62 (MQ=255)
                                                                                                                                                                                          gggATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggtt                                                         >  1:413182‑M1/1‑60 (MQ=255)
                                                                                                                                                                                                  gCCTCTTCTTCGTGCATGGGTCGGTAAGAATGACTCATGATGTGGTCTGCTCctcaatgtggaattgtgtcgcagtagaccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccagtcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactggtggtcagcatcccggttgggcgttt                                                 <  2:218267‑M1/251‑200 (MQ=255)
                                                                                                                                                                                                  gCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgttt                                                 >  1:367661‑M1/1‑52 (MQ=255)
                                                                                                                                                                                                   ccTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttg                                                <  1:406598‑M1/251‑201 (MQ=255)
                                                                                                                                                                                                            cTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaag                                         >  1:51740‑M1/1‑42 (MQ=255)
                                                                                                                                                                                                               gCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatctcccacaaactgttacccatgcgcatacggtccatcacgcggtcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcttttgtaagaagagcgg                                    <  1:290061‑M1/251‑213 (MQ=255)
                                                                                                                                                                                                                     gtCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcg                              >  1:79376‑M1/1‑33 (MQ=255)
                                                                                                                                                                                                                           cAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgat                         <  1:219670‑M1/250‑224 (MQ=255)
                                                                                                                                                                                                                             gAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctg                      <  1:193278‑M1/251‑227 (MQ=255)
                                                                                                                                                                                                                                    tCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatg               >  1:180795‑M1/1‑18 (MQ=255)
                                                                                                                                                                                                                                       tgatgTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatc            >  1:223097‑M1/1‑15 (MQ=255)
                                                                                                                                                                                                                                         atgTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcac          <  1:341711‑M1/251‑239 (MQ=255)
                                                                                                                                                                                                                                         atgTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcac          >  1:48393‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                             ggTCTGCTActcaaggtggcattgtgtcgcagtataccgccagaaacggggagtaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtacatcacgagttcgcccagcaacttggtcctcccttccatattcctgttggtcagcatcccggttgggcgtttggcagcagagcggcgatcgacgctctggtggctgctccctttt      >  2:540355‑M1/1‑9 (MQ=255)
                                                                                                                                                                                                                                             ggTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttt      <  1:151903‑M1/251‑243 (MQ=255)
                                                                                                                                                                                                                                                  gCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttttc    <  1:261185‑M1/248‑245 (MQ=255)
                                                                                                                                                                                                                                                  actactaaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgancgacgatctggttgatgatcactttttcgt  >  2:254880‑M1/2‑4 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      
AAGCGACTCGAACGTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTATAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTATTATTGACATCCTCACTGCCCTAAAGGATGGGGATTTCGGTAATGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCCTTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGT  >  NC_000913/4518188‑4518679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: