Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,077,568	Δ1,832 bp		[cmtA]–cmtB	[cmtA], cmtB

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3077568	3079399	1832	44 [0]	[1] 45	[cmtA]–cmtB	[cmtA],cmtB

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3077567	0 (0.000)	44 (0.680)	41/488	0.3	100%	coding (1293/1389 nt)	cmtA	mannitol‑specific PTS enzyme IICB component CmtA
	?	NC_000913	3079400 =	0 (0.000)					intergenic (‑70/+244)	cmtB/tktA	mannitol‑specific PTS enzyme IIA component CmtB/transketolase 1

ATAAACAGACGCTGTCAGAAATTACACTCACCAGTAATTCATTATCGGTAATTTCTGGCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACACGTTTCACGCGCCCTTCCAGACTGGCATGAGTAACGACGATATCCGCATCCGCAGGCACGTTTTCTATGGCGTAATGTTTTACTTCAATTGCCAGCCCCGCTTTTTCCAGGCGTTTACGGAAGGTGGTCGCGCCCATCGCACTGGAGCCCATCCCCGCATCGCAAACAAAGGCGATACGCTTAACCCTGCTTAACGAGAATGCACCCTCTTGTTTCATCGCCTTAACCGCATTGGCTGACTGAGCAAAC  >  NC_000913/3077336‑3077816                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          aTAAACAGACGCTGTCAGAAATTACACTCACCAGTAATTCATTATCGGTAATTTCTGGCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaa                                                                                                                                                                                                                                         >  1:491686‑M1/1‑232 (MQ=255) aTAAACAGACGCTGTCAGAAATTACACTCACCAGTAATTCATTATCGGTAATTTCTGGCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGNTTATCCGTCACAaagcaattgagcagggaa                                                                                                                                                                                                                                         >  2:251454‑M1/1‑232 (MQ=255)                   aaaTTACACTCACCAGTAATTCATTATCGGTAATTTCTGGCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACCaagcaattgagaagggaaaccggtgttttgaaaac                                                                                                                                                                                                                        >  2:405041‑M1/1‑214 (MQ=255)                        acacTCAACAGTAATTCATTATCGGTAATTTCTGGCAGTTCAAATACGCGCAGACGGACATACCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACATCTGTAATCCGTGATTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAAAATAGTTATTAATCAAACTTAGTGGTTTATACGTTACAaagcaaatgggcagtgacaccggcgtttttaaaaaagtggat                                                                                                                                                                                                                 >  2:424914‑M1/1‑209 (MQ=255)                          acTCACCAGTAATTCATTATCGGTAATTTCTGGCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaatt                                                                                                                                                                                                                >  2:164065‑M1/1‑207 (MQ=255)                                    aattaattCTCGGAAATTTCTGGCAGTTCAAATACGCGCAGACGGACATCCCGCTTACCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAAAATCAGTGGTTTATCCGTCCCAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttctt                                                                                                                                                                                                     >  2:376346‑M1/1‑197 (MQ=255)                                        cATTATCGGTAATTTCTGGCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATAGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaaatattaatttcttatat                                                                                                                                                                                                 >  1:244585‑M1/1‑193 (MQ=255)                                         aTTATCGGTAATTTCTGGCAGTTCAAATACGAGCAGACGGACATACCGCTTGACATAAATAGCAGCAACTTTGGTTTTCATTTTTAACTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCTACAATATAGTTATTAATCAATATCCGTGGTTTAACCGTCACCaagcaattgagcagggaaccaggtgttttgtaaacatggaagtattaatttattatat                                                                                                                                                                                                 >  2:461796‑M1/1‑192 (MQ=255)                                              cGGTAATTTCTGTCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacat                                                                                                                                                                                            <  2:11526‑M1/250‑64 (MQ=255)                                                         ggCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCATCTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttaaataacattgagttataga                                                                                                                                                                                 <  2:459613‑M1/250‑75 (MQ=255)                                                         ggCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttataga                                                                                                                                                                                 <  1:164065‑M1/250‑75 (MQ=255)                                                          gCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagat                                                                                                                                                                                >  1:216524‑M1/1‑175 (MQ=255)                                                             gTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGCTCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatata                                                                                                                                                                             >  1:341374‑M1/1‑172 (MQ=255)                                                                aaaatACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaa                                                                                                                                                                         <  2:379078‑M1/250‑83 (MQ=255)                                                                         gcAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGCGTTTTGGATCGCCAATATAGTTATTAATCCATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtc                                                                                                                                                                 >  1:213085‑M1/1‑160 (MQ=255)                                                                                        gCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtga                                                                                                                                                 <  1:215160‑M1/251‑107 (MQ=255)                                                                                           tgtcataAATAGCAGCAACTTTGGTTTTCATTTGTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGTATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcatggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgat                                                                                                                                                <  2:213085‑M1/246‑108 (MQ=255)                                                                                             ccATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGATAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgcgatgcat                                                                                                                                            >  2:485168‑M1/1‑140 (MQ=255)                                                                                                     agcagcAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacata                                                                                                                                    <  1:197819‑M1/251‑120 (MQ=255)                                                                                                        agcaACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataatt                                                                                                                                 <  1:13773‑M1/251‑123 (MQ=255)                                                                                                        agcaACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacat                                                                                                                                     <  1:131198‑M1/247‑119 (MQ=255)                                                                                                        agcaACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacat                                                                                                                                     >  2:131198‑M1/1‑129 (MQ=255)                                                                                                           aaCTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACCaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataaacacaaatgtcaatacgcatatcgtgatgcatattacataattgat                                                                                                                              >  2:231598‑M1/1‑126 (MQ=255)                                                                                                                       cATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcat                                                                                                                   <  1:165921‑M1/250‑137 (MQ=255)                                                                                                                       cATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTGGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATGCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcata                                                                                                                  <  1:176940‑M1/251‑138 (MQ=255)                                                                                                                             tACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaat                                                                                                             <  1:507735‑M1/250‑143 (MQ=255)                                                                                                                                  ctGTAATCAGTGTTTCTGTTCGGCGGTTAATTGATTAAATAACGTGTCGAGTTTTGGATCGCCAATCTAGTTATTAATCAATATAAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagagaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttcttgcatctaaatctttgt                                                                                                       >  2:332100‑M1/1‑103 (MQ=255)                                                                                                                                  ctGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATAGCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgaggtatagatataacaacaaatttcaatatgcatatcgtgatgcatgttacataattgatatttattgcatataaatattt                                                                                                         <  2:422009‑M1/249‑147 (MQ=255)                                                                                                                                      aagcagggtttatgttCGGCGGTTAATTGAATAAATAAAGTGGCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATACGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgat                                                                                                    <  2:77112‑M1/243‑152 (MQ=255)                                                                                                                                                tATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatcttacataattgatatttattgcatataaatatttgtgatctacaacacg                                                                                          <  1:295595‑M1/250‑162 (MQ=255)                                                                                                                                                  tgatcggCGGTTAATTGATTAAATAAAATGTCGAGTTTTGGATCGCCCATATAGTTATTAATCAATATCAGTGGTTTATACGTCACAaagcaattgagtagggaaaacggtgttttgataacagtgaattattaatttcttatataacattgagttattgatattactacaaatgacaatacgaataacgtgatgactattacataattgatatttattgcatttaaatatttttgatttacaacacgcct                                                                                       >  2:492819‑M1/4‑87 (MQ=255)                                                                                                                                                             tAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgc                                                                             <  1:411363‑M1/250‑175 (MQ=255)                                                                                                                                                              aaTTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgct                                                                            <  1:530345‑M1/250‑176 (MQ=255)                                                                                                                                                                  gATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgcttgtcc                                                                       <  1:310670‑M1/251‑181 (MQ=255)                                                                                                                                                                   aTTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgcttgtccg                                                                      >  2:324999‑M1/1‑70 (MQ=255)                                                                                                                                                                                 cGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgcttgtccgcaaacggacatat                                                         <  1:251454‑M1/250‑195 (MQ=255)                                                                                                                                                                                     aatatattctcttttgttattattaatcaatatcagtggtttatCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatctgtgatctacaacacgccttatctattgcttgtccgcaaacggacatatcaagg                                                    <  2:106759‑M1/232‑200 (MQ=255)                                                                                                                                                                                         ggATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgcttgtccgcaaacggacatatcaaggtaat                                                <  1:451013‑M1/251‑204 (MQ=255)                                                                                                                                                                                             cGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgcttgtccgcaaacggacatatcaaggtaataaaa                                            <  2:305383‑M1/251‑208 (MQ=255)                                                                                                                                                                                             cGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgcttgtccgcaaacggacatatcaaggtaataaa                                             <  1:86843‑M1/250‑207 (MQ=255)                                                                                                                                                                                              gCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgcttgtccgcaaacggacatatcaaggtaataaaaa                                           <  1:507064‑M1/251‑209 (MQ=255)                                                                                                                                                                                                                cAATATCAGTGGTTTATCCGTCACAaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacata                                                                                                                                    >  1:353258‑M1/1‑25 (MQ=255)                                                                                                                                                                                                                                      acaaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgcttgtccgcaaacggacatatcaaggtaataaaaaaggtcgccgaagcgacctttttacccgaaatgctaattac   >  1:132634‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                       caaagcaattgagcagggaaaccggtgttttgaaaacagtgaattattaatttcttatataacattgagttatagatataacaacaaatgtcaatacgcatatcgtgatgcatattacataattgatatttattgcatataaatatttgtgatctacaacacgccttatctattgcttgtccgcaaacggacatatcaaggtaataaaaaaggtcgccgaagcgacctttttacccgaaatgctaattaca  <  2:479300‑M1/251‑250 (MQ=255)                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          ATAAACAGACGCTGTCAGAAATTACACTCACCAGTAATTCATTATCGGTAATTTCTGGCAGTTCAAATACGCGCAGACGGACATCCCGCTTGCCATAAATAGCAGCAACTTTGGTTTTCATTTTTACCTCTGTAATCAGTGTTTATGTTCGGCGGTTAATTGATTAAATAAAGTGTCGAGTTTTGGATCGCCAATATAGTTATTAATCAATATCAGTGGTTTATCCGTCACACGTTTCACGCGCCCTTCCAGACTGGCATGAGTAACGACGATATCCGCATCCGCAGGCACGTTTTCTATGGCGTAATGTTTTACTTCAATTGCCAGCCCCGCTTTTTCCAGGCGTTTACGGAAGGTGGTCGCGCCCATCGCACTGGAGCCCATCCCCGCATCGCAAACAAAGGCGATACGCTTAACCCTGCTTAACGAGAATGCACCCTCTTGTTTCATCGCCTTAACCGCATTGGCTGACTGAGCAAAC  >  NC_000913/3077336‑3077816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑