Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,853,797 IS1 (–) +9 bp coding (175‑183/1359 nt) ydjE ← putative transporter YdjE

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1853797 =0 (0.000)41 (0.630) 39/490 0.3 100% coding (183/1359 nt) ydjE putative transporter YdjE
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region
* ? NC_000913 = 18538050 (0.000)79 (1.220) 71/488 0.0 100% coding (175/1359 nt) ydjE putative transporter YdjE
?NC_000913 1978503 = NA (NA)noncoding (768/768 nt) IS1 repeat region

TTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGT  >  NC_000913/1978491‑1978741
            |                                                                                                                                                                                                                                              
tcttgttattagggTAATGAATCCAACTTATTGATAGTGTTTTATGTTTAGATAATGACCGATGACTTTGTCATGCATCTCCACCGCTTTTGAGCACGACAGCGACTTCCGTACCATCCGTGCCAAGTGCTACATCAGATTCAGGTTATGTCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGCAGGGCTTCATTGAGCGACCAGCCAGCCGTCCTCCaactcacacctc  >  2:61392/12‑240 (MQ=2)
            |                                                                                                                                                                                                                                              
TTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGT  >  NC_000913/1978491‑1978741

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.