Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 867,553 Δ15,836 bp [gsiA][ybjG] [gsiA], gsiB, gsiC, gsiD, pdeI, dgcI, rimO, bssR, yliI, gstB, dacC, deoR, [ybjG]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 867553 883388 15836 75 [0] [1] 79 [gsiA]–[ybjG] [gsiA],gsiB,gsiC,gsiD,pdeI,dgcI,rimO,bssR,yliI,gstB,dacC,deoR,[ybjG]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 8675520 (0.000)75 (0.850) 68/488 0.1 100% coding (33/1872 nt) gsiA glutathione ABC transporter ATP binding subunit GsiA
?NC_000913 883389 = 0 (0.000)intergenic (‑1/‑284) ybjG/mdfA undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter

GTCGTGCGGAAAAAGATGTCCCATCGTCCAGGACACAAACAGGCTGACCGCCAGCGCGATAGCGATTTTTATCACCAGTTGCCGTTGTGCTGTAAGCCCCCACAACCAAAGTACCACGGCCAGCAACGGCACCACGGTAATCAAATCTTTAGCAATAAAAATCGCCAACGAGATCATCCACGGAGCCGAGTCTGGCGTCGCGTTAATAAGAGAGAATAGAGAGAGATTCAAATTTTCCAGCATAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAA  >  NC_000913/883146‑883639
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                          
taatggattacggcggattaagtctcgcggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTcc                                                                                                                                                                                                                                                      <  1:176497‑M2/7‑1 (MQ=255)
     gattacggcggattaagtctcgcggaagcctgcgagcggggagtaatggaaaaactccctgcgcttggcgggagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctccgcaggcggtacgccaaccaacggtatctaccggggaaaaggggacaccgtttccacacagggatggaattgatgccggtaatAACTTCCCGAcgg                                                                                                                                                                                                                                                >  1:232954‑M2/239‑250 (MQ=255)
        ttcgggggattaagtctcgcggaagcgtgcgagcgggtagtaatgtaaaaacgccctgctcttgtcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacacggaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaagggactccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCaa                                                                                                                                                                                                                                              <  2:621773‑M2/15‑1 (MQ=255)
          cggcggattaagtctcgcggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGt                                                                                                                                                                                                                                           <  1:597977‑M2/18‑1 (MQ=255)
           ggcggattaagtctcgcggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTg                                                                                                                                                                                                                                          >  1:599302‑M2/233‑251 (MQ=255)
            gcggattaagtctcgcggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacaccgtgatgaacttgatgccggtaatAACTTCCCGACGCAaaggg                                                                                                                                                                                                                                          >  2:413029‑M2/232‑248 (MQ=255)
              ggattaaggctcgcggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGAtt                                                                                                                                                                                                                                       <  2:11202‑M2/22‑1 (MQ=255)
                attaagtctcgcggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTaa                                                                                                                                                                                                                                     <  1:451457‑M2/24‑1 (MQ=255)
                  taagtctcgcggaagccggcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggtttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaagtaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgcctcacagtgatgaacttgaggcgggtaatAACTTCCCGACGCAAAGTGATTaaa                                                                                                                                                                                                                                    <  1:617309‑M2/25‑1 (MQ=255)
                       ctcgcggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAggg                                                                                                                                                                                                                                >  1:57895‑M2/221‑249 (MQ=255)
                         cgcggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAg                                                                                                                                                                                                                              <  1:156630‑M2/31‑1 (MQ=255)
                         cgcggaagcctgcgagcgggtagtaatggaaaaactcccggcgcttggcgggagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAGGGAGcc                                                                                                                                                                                                                            <  2:386530‑M2/32‑1 (MQ=255)
                          gcggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAAATTCCCGACGCAAAGGGATTAAAAGGGAGcc                                                                                                                                                                                                                            >  2:238489‑M2/218‑250 (MQ=255)
                           cggaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCaa                                                                                                                                                                                                                          <  1:637054‑M2/35‑1 (MQ=255)
                             gaagcctgcgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATa                                                                                                                                                                                                                        <  1:126680‑M2/37‑1 (MQ=255)
                                     cgagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAg                                                                                                                                                                                                                <  1:473519‑M2/45‑1 (MQ=255)
                                      gagcgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGt                                                                                                                                                                                                               >  1:76460‑M2/206‑251 (MQ=255)
                                         cgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGt                                                                                                                                                                                                            >  1:136978‑M2/203‑251 (MQ=255)
                                         cgggtagtaatggaaaaactccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGt                                                                                                                                                                                                            <  2:171773‑M2/49‑1 (MQ=255)
                                              agtaatggaaaaactccctgcgcttggcggtcgcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccgggatctaccgggaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGCTTAAAAGGGAGCCAATACAGGCCAgtcgtagcg                                                                                                                                                                                                        >  2:54378‑M2/198‑246 (MQ=255)
                                                     gaaaaactccctgcgcttggcggtagcggtgncttaatcgcgatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGt                                                                                                                                                                                                <  2:321505‑M2/61‑1 (MQ=255)
                                                           caccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccattgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGt                                                                                                                                                                                          >  2:387620‑M2/185‑251 (MQ=255)
                                                            ccccggcgctttgcggtagcggtggcttaagcgctatcgaccatgaagggaatgtcgcgctaccgtttaacgccgaaggaatgtatcgggcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacattgatgaacttgatgccggtaagAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGAAAGTCGTTGAGAATAAAGTGCAGGtt                                                                                                                                                                                         <  2:261621‑M2/68‑1 (MQ=255)
                                                             ccctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGt                                                                                                                                                                                          <  2:243546‑M2/67‑1 (MQ=255)
                                                              cctgcgctgggcggtggcggtggcttaatcgctatcgaccaggaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTaa                                                                                                                                                                                       <  2:168959‑M2/70‑1 (MQ=255)
                                                               ctgcgcttggcggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgcaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaacaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTtaac                                                                                                                                                                                      >  1:223515‑M2/181‑250 (MQ=255)
                                                                          ggtagcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaacgaaggaatgtatcgcgcctggggctccgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacaaagtgatgaacttgatgacggtaatAACTTCCCGACGCAAAGTGATTAAAAGAGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGc                                                                                                                                                                           >  1:102498‑M2/170‑251 (MQ=255)
                                                                             agcggtggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGc                                                                                                                                                                        >  1:389407‑M2/167‑251 (MQ=255)
                                                                              gaggtggcttaatctatatcgaccaggaagggaatgacacgctaccgtttaacaacgaaggaatttatcgcgcctggggctaagcaggcgagacgccaaccaacggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCCAAGGGATTAAAAGGGAGACAATACAGGAAAGTCGTTGAGAATAAAGTGCAGGTTACATTGGTTAAAGAGGc                                                                                                                                                                        >  2:583446‑M2/166‑250 (MQ=255)
                                                                                   ggcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTc                                                                                                                                                                  <  1:566559‑M2/91‑1 (MQ=255)
                                                                                    gcttaatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCt                                                                                                                                                                 <  1:479431‑M2/92‑1 (MQ=255)
                                                                                        aatcgctatcgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTAt                                                                                                                                                              <  1:29017‑M2/95‑1 (MQ=255)
                                                                                                 cgaccatgaagggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAg                                                                                                                                                    <  2:76460‑M2/105‑1 (MQ=255)
                                                                                                  gaccatgacgggaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACCGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAagg                                                                                                                                                   >  2:142608‑M2/146‑250 (MQ=255)
                                                                                                    ccatgaaggtcatgccgctctaccgtttaaanccgaaggaatgtatcgcgcctggggctacgcaggcgctacgccagccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgatctttatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCCTTGAGAATAAAGTGCAGGGTAAACTGGGTAAACCGGCATCGTCTTAGTTCCCTCAAGCgg                                                                                                                                                 <  2:334535‑M2/108‑1 (MQ=255)
                                                                                                             gaatgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgagaaaaaggggaaaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGCTTAACAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGAAGGTTAAACTGGGTAAAACGGCATCGTCTTATTTCCCTCACGCGGCCTGTTTAc                                                                                                                                        >  2:422655‑M2/135‑251 (MQ=255)
                                                                                                               atgtcgcgctaccgtttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACgg                                                                                                                                      >  1:217296‑M2/133‑251 (MQ=255)
                                                                                                                 gtcgcgctcccgtttaacacctaaggactgtntcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacaaagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACggtg                                                                                                                                    <  2:331125‑M2/121‑1 (MQ=255)
                                                                                                                   cgcgctaccgtttaacaccgaaggaatgtatcgagcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACggtggg                                                                                                                                  >  2:652779‑M2/129‑251 (MQ=255)
                                                                                                                     cgctaccgtttaacgccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctgccgtgaaaaaggggacaccgttgccacacattgttgaacttgatgccggtaatAACTGCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACggtgggtg                                                                                                                                <  2:396755‑M2/125‑1 (MQ=255)
                                                                                                                              ttaacaccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAAc                                                                                                                        <  1:428777‑M2/133‑1 (MQ=255)
                                                                                                                                 acaccgaaggaaggtatcgcgcctggggctacgcaggcgatacgccaaccaccggtagctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGc                                                                                                                    <  2:57895‑M2/137‑1 (MQ=255)
                                                                                                                                  caccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGACTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGc                                                                                                                    >  1:486484‑M2/114‑250 (MQ=255)
                                                                                                                                   accgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaacggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCAt                                                                                                                  >  2:143475‑M2/113‑251 (MQ=255)
                                                                                                                                    ccgaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGGGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCAt                                                                                                                  >  1:597493‑M2/112‑250 (MQ=255)
                                                                                                                                    ccgaaggaatgtatcgagcctggggctacgcnggagatacgccaaccgccggtatctaccgtgaaaaaggggacgccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATa                                                                                                                 <  2:372644‑M2/140‑1 (MQ=255)
                                                                                                                                     cgaaggattgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAATCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAg                                                                                                                <  2:176169‑M2/141‑1 (MQ=255)
                                                                                                                                     cgaaggaatgtatcgcgcctggggctacgcaggcgaaacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgcaggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAGCTGGGTACAGCGGCATCGTCTTATTTCCCTCAGGCGGCCTGTTTACGGCGGGCGATTGTCACGGGcatcg                                                                                                                >  1:594980‑M2/111‑249 (MQ=255)
                                                                                                                                      gaaggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctacagtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAgg                                                                                                               >  1:323060‑M2/110‑251 (MQ=255)
                                                                                                                                        aggaatgtatcgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGtt                                                                                                             <  1:676035‑M2/144‑1 (MQ=255)
                                                                                                                                                  cgcgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATACAACt                                                                                                   >  1:73740‑M2/98‑251 (MQ=255)
                                                                                                                                                    cgcctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGGNGTTGTAACGGGCATAGGTTAAATAAAACtt                                                                                                  >  2:339987‑M2/96‑250 (MQ=255)
                                                                                                                                                      cctggggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacgcagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTGCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTaaa                                                                                               <  1:423242‑M2/158‑1 (MQ=255)
                                                                                                                                                      ccgggggatacggcggcgataagccaaccaccggtatctaccgggaaaaaggggacaccgtggccacacagtgatgaacttgatgccggtaatAACTGCCCGACGCAAAGTGATTAAAAGGGCGCCAATACAGGCAAGGCGTTGATAATAAAGTGCAGGTTAAACTTGGTAAAGCGTCATCGTCTTAGTTCCCACAAGCGGCCTGTTTACGGTGGGTTATTGTAACGGGCATAGGTCAAATAAAACTtaag                                                                                               <  2:109714‑M2/158‑2 (MQ=255)
                                                                                                                                                           ggctacgcaggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTaaagaaag                                                                                          <  1:54378‑M2/163‑1 (MQ=255)
                                                                                                                                                            gctccccaggcgatccgccaaccacccgtatctaccgggaaaaaggggacagcgtttccacacagtgatgaacgtgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGTGCCAATGCAGTCAAGTCGTTGAGAGGAAAGTGCAGGTTAAACTGGGTAAAGCGGCAACGTCTTATTTCCCTCAAGCTGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGc                                                                                         <  1:415671‑M2/164‑1 (MQ=255)
                                                                                                                                                               acgcaggcgatacgccaaccaccggtatctaccgggaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGt                                                                                       <  2:536319‑M2/166‑1 (MQ=255)
                                                                                                                                                                  caggcgatacgccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCt                                                                                   >  2:102128‑M2/82‑251 (MQ=255)
                                                                                                                                                                          actccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCg                                                                            <  1:199268‑M2/177‑1 (MQ=255)
                                                                                                                                                                          acgccaaccaccgggatctaacgtgaaaaaggggacaccgttgacacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATCCTCGt                                                                           >  2:464071‑M2/74‑251 (MQ=255)
                                                                                                                                                                             ccaaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgcaggtacaAACTTCCCGACGCACAGTGATTAAAAGTGAGCCAATACAGGCCAGTCGTTGAGAATAAAGTGCAGGGTCAACTGGGTAAAGCAGAATCGTCTTATTTCACTCCAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATCGGTTCAATAAAACTTAAAGAAAGCGTAGCTAAACTCGtaat                                                                        >  2:134973‑M2/71‑251 (MQ=255)
                                                                                                                                                                                    ccggtatctaccgtgaaaaaggggaccccgtngccaaacagtgatgaacttgatgccggtaatAACTTCCCGACTCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGGCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTaa                                                                 <  2:357146‑M2/188‑1 (MQ=255)
                                                                                                                                                                                    ccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTaa                                                                 <  1:647537‑M2/188‑1 (MQ=255)
                                                                                                                                                                                    ccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTaa                                                                 <  1:531215‑M2/188‑1 (MQ=255)
                                                                                                                                                                                       gtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTTAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGaa                                                              <  2:66050‑M2/191‑1 (MQ=255)
                                                                                                                                                                                             accgtgaaaaaggggacaccgttgccacacagtgatgaccttgatgccggtaatAACGTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGATAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCt                                                        <  2:105302‑M2/197‑1 (MQ=255)
                                                                                                                                                                                                gtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTa                                                      >  1:432681‑M2/52‑250 (MQ=255)
                                                                                                                                                                                                gtgaaaaaggggacaacgtagccaaacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGACAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACGTGGTAAAGCGGCATCGTCGTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACTGGCATAGGTTAAATAAAACTTTAAGAAAGCGTAGATATACGCGTAATAATGTAAGAATGTgcttca                                                     <  2:693980‑M2/200‑3 (MQ=255)
                                                                                                                                                                                                              accgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCt                                       >  2:300969‑M2/38‑251 (MQ=255)
                                                                                                                                                                                                              accgttgccacacagtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCt                                       <  1:97182‑M2/214‑1 (MQ=255)
                                                                                                                                                                                                               ccgttgccacacagtgatgatcttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTa                                      <  1:460198‑M2/215‑1 (MQ=255)
                                                                                                                                                                                                                     ccacacagggatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTAcaaaag                                <  2:57158‑M2/221‑2 (MQ=255)
                                                                                                                                                                                                                            gtgatgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCttt                         <  1:610847‑M2/228‑1 (MQ=255)
                                                                                                                                                                                                                               atgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCCATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTAttt                                                                                                                                                            >  1:665272‑M2/21‑117 (MQ=255)
                                                                                                                                                                                                                               atgaacttgatgccggtaatAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTAttt                                                                                                                                                            <  2:665272‑M2/97‑1 (MQ=255)
                                                                                                                                                                                                                                                 aTAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTttatt    <  1:102128/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   aaCTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTttatta   <  1:378402/250‑1 (MQ=255)
                                                                                                                                                                                                                                                   aaCTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTaa  <  1:339987/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   aaCTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGGAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTaa  <  1:302819/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                          
GTCGTGCGGAAAAAGATGTCCCATCGTCCAGGACACAAACAGGCTGACCGCCAGCGCGATAGCGATTTTTATCACCAGTTGCCGTTGTGCTGTAAGCCCCCACAACCAAAGTACCACGGCCAGCAACGGCACCACGGTAATCAAATCTTTAGCAATAAAAATCGCCAACGAGATCATCCACGGAGCCGAGTCTGGCGTCGCGTTAATAAGAGAGAATAGAGAGAGATTCAAATTTTCCAGCATAACTTCCCGACGCAAAGTGATTAAAAGGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAA  >  NC_000913/883146‑883639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: