| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 83 [0] | [0] 83 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 83 (0.930) | 77/492 | 0.0 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGC > NC_000913/2755911‑2756406 | aTGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCT‑AGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACNTTGGGCCTAAACGCAGGGAGACTCCCCgcgc > 2:350157‑M1/1‑247 (MQ=255) ccgGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattg < 2:73627‑M1/250‑15 (MQ=255) cGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattga < 1:132213‑M1/251‑16 (MQ=255) cccccccatctccaccaaaATTCTCCATCGGTGATTACAAGAGTCATCCGATGAAGTCCTAATAAGCCGCACGGCGCAAGCCCGGCGGGCTTTTGTTTGCCCTCAATTTGTCCCGCGATGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggacgtatgatt < 2:273099‑M1/240‑30 (MQ=255) caccaAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggc < 1:271743‑M1/251‑44 (MQ=255) ccATCGGTTATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcat < 1:699674‑M1/250‑55 (MQ=255) cGGTGATTACCAGAGTCATCCGCTGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgcgcggatgtatgattttgtgattattggcggcggcctcatcggcc > 2:230626‑M1/1‑192 (MQ=255) ggTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgcttttgtgattattggcggcggcatcatcggcat > 1:460989‑M1/1‑191 (MQ=255) ggTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcat < 1:86976‑M1/251‑61 (MQ=255) gTGATTGCCAGAGTCATCCGATGAAGTCCAAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTGTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTGGAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcaacggcatg < 2:303756‑M1/251‑62 (MQ=255) gATTACCAGAGTCATCCGAGGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCGGCTGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatctgcatgtc < 2:158479‑M1/251‑64 (MQ=255) tACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcctcggcatgtcgac > 2:680507‑M1/1‑185 (MQ=255) aCCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgacc < 1:230626‑M1/251‑68 (MQ=255) ccAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccg < 1:320529‑M1/251‑69 (MQ=255) gagTCATCCGATGAAGTCCTAAGCGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCCGGGAGACTCCCCgcgcacaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggaatgtcgaccgccc > 1:605810‑M1/1‑180 (MQ=255) ccGATGAAGTCCTAAGAGCCCGCACGGCGCNAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaac < 2:354906‑M1/250‑78 (MQ=255) aaGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCACAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtct < 2:217865‑M1/249‑90 (MQ=255) gagaccgcacGGCGAAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGGCCGAAGAGAACTAATTAAATCCGACCCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTTCGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggtggtattattttgttattattggcggcggcatcagcggcatgtcgttcgccatgcaactgattgatgtctatcc < 2:446298‑M1/247‑94 (MQ=255) cGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcc < 1:392089‑M1/249‑101 (MQ=255) gcAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcatt > 1:242910‑M1/1‑145 (MQ=255) aaGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgc > 1:591032‑M1/1‑143 (MQ=255) gCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccgggcgcccgcattgcgt > 1:212711‑M1/1‑141 (MQ=255) cccTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgtt < 1:172444‑M1/251‑112 (MQ=255) ttttttGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaa > 1:257929‑M1/1‑130 (MQ=255) tttttGGGCCCTCAATGTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaa < 1:135632‑M1/249‑121 (MQ=255) ttgggccctCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgccggaaaaagag < 2:642759‑M1/246‑125 (MQ=255) tgtgCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagt < 1:17957‑M1/250‑126 (MQ=255) gtgCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgctcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtc < 1:360133‑M1/250‑127 (MQ=255) tgCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCACCGAAAAGCTCTATTGTTTACGTTGGGCCTAACCGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgacatgcaactgattgatgtctatccggacgcccgcattgggttgctggaaaaagagtacc > 1:640979‑M1/1‑123 (MQ=255) ccTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccc < 1:454699‑M1/251‑132 (MQ=255) ccTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccc < 1:277880‑M1/251‑132 (MQ=255) tttGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcct > 1:114215‑M1/1‑114 (MQ=255) ttGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcct < 1:713617‑M1/250‑138 (MQ=255) gTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgcttattggcggcggcatcatcggcatgtcgaccgccatgcaactgattggtgtctctccggacgcccgcattgcgttgctggacaaagaggccgcaccggcctgtc > 2:546618‑M1/1‑111 (MQ=255) cccGCGAAGTCCGAAGTGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcggtgctggaaaaagagtccgccccggcctgtcac > 1:27573‑M1/1‑109 (MQ=255) gcgAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccag < 1:350157‑M1/251‑146 (MQ=255) gcgAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaacgccatgcaactgattgaggtctatccggacgcccgccttgcgttacnggcaaaagagtcacaccccgccggtccaccg > 2:334839‑M1/1‑106 (MQ=255) cgAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcacc > 1:376104‑M1/1‑105 (MQ=255) aaGTCCGATGAGAACTAATTAAATCCGAACCTGTTAGGACAATTGATAGGACCACCGAAAAGCTCTATGGTTTGCGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgatgttgtgattattggcggcggcgtcatcggcatgtcgaccgccatgcaacggattgatgtctatccggatgcccgcattgcgttgctgtaaaaagagtccgccccggcctgtcaccagacg < 1:431285‑M1/251‑149 (MQ=255) aaGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcacaggaattgagcggatgtatgattttgtgattattggcggcggcatcatctgcctgtcgaccgccatgcaactgtttgatgtctatccggccgcccgccttgcgttgctggcaaaagagtccgcccaggcccgtccccaacc > 2:513154‑M1/1‑103 (MQ=255) aaCTAATTAAATCCGATCCTTTTAGGCCCATNGAAAGGCCCAACGAAAAGCTCTATGTTTTACGTTGGGCCAAAACGCAGGGAGACTCCCCgcgaaaaggaattgagcggatgtatgatttggtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcacaagacgggccacaacagc < 2:327740‑M1/251‑161 (MQ=255) aCTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGACCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCACgcgcaaaggaattgagcggctgtatgattttgtgattattggcggcggcatcatcggcatgtccaccgccctgcaaatgatagatgtccatacggacgcccgcattgcgttgctgggaaaagagtccaccccggcctgtcaacagacgcggcaaaaaag > 1:52188‑M1/1‑90 (MQ=255) tAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTCTTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaagggattgagcggatgtatgattttgtgattattggcggaggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacccccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccccaacagcggc > 1:3777‑M1/1‑88 (MQ=255) tAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatggcgaccgccatgcaactgattgatggctatccggacgcccgcattgcgtttctggaacaagagtccgcccncgcctgtcccccacagggccacaaaagcggg > 2:329160‑M1/1‑88 (MQ=255) ttAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaac > 2:374476‑M1/1‑85 (MQ=255) ttAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaac < 1:374476‑M1/162‑78 (MQ=255) aaacccgaacCTTTTAGGCCCATTTATAGGCCCAACAAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCGGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgcccgccatgcaactgattgatgtctatccggacgcccgcattgcgtggctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgat < 2:132049‑M1/247‑169 (MQ=255) ccgcgtccgatctaggcccattgatAGGCCCAAAGAAACGCTTTATTGTTTACGTTGGCTATAAACGCGGGGAGACTCCCCgcgaaaaggaattgagcggatgtatgattttgtggttattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcagtgcgttgcgggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatcc < 2:39245‑M1/239‑171 (MQ=255) gAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgta > 2:620908‑M1/1‑77 (MQ=255) gAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgta < 1:620908‑M1/101‑25 (MQ=255) aCCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAACCGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcataatcggcatgtcaaccgccatgcaactgattgatgtctatccggacgcccccattccggtgctggaaaaagggtccgccccggcccgtcacacgacgggccaccaaagcggcgtgacccaagccc > 2:228714‑M1/1‑75 (MQ=255) tttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggg > 1:673057‑M1/1‑71 (MQ=255) aGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgtttgatgtctatccggacgcccgcattgcgttgctggaaaaagaggccgccccggcctgtcaccagccgggccaccacagcggcgtgatcc > 1:39245‑M1/1‑68 (MQ=255) gCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctatt > 1:153875‑M1/1‑66 (MQ=255) cccATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcacccgacgggccacnacagcggcgggatccatgccgggggctatt > 2:324543‑M1/1‑65 (MQ=255) ccATTGATAGCCCCAACGAAAAGCTTTATTGTTTACGTTGGGCCTAAACGCAGGGAGACCCCCCgcgcaaaggaattgagcggatgtatgatttggtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattac < 1:479545‑M1/251‑188 (MQ=255) ccATTGAGAGGCCCAACGAAAAGCTCTATGGTTTAGGTGGGGCCAAAACTCAGGGAGACTCCCCgggcaaaggaatggagcggatgaatgatttgttgattattggcggcggcatcagcggcatgtcgaccgccatgcaacggatggatgtttatccggacgcccgcatggcgttgctggaaaaagagtccgccccgccctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattac < 2:373851‑M1/251‑188 (MQ=255) cATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtccaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccaggacggccccaacagcggcgttgaccatgccggggtctattacc > 2:644479‑M1/1‑63 (MQ=255) aGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgcccgccatgcaactgattgatgtctatccggacccccgcattgcgttgctggaaaaagagtccgccccggcctgtcacccgacgggccacaacagcggcgtgatccctgccgggggctattacacgtccgg > 2:459303‑M1/1‑56 (MQ=255) gCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgcgatccatgccggggtctattacacgtccggc > 1:450220‑M1/1‑54 (MQ=255) cGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggaggcggcatcataggcatgtcgaccgccatgcaaatgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacaaggccggcagcctg > 1:281009‑M1/1‑48 (MQ=255) aGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcataggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccctgcaactgattgatgtctatccggacgcccgcattgcggtgctggaaaaagaggccgccccggactgtcacccgccgggccacaaccgcggcgtgaaccatgccgnggtctgttccacggccggcagcccgcaggcg > 2:337684‑M1/1‑43 (MQ=255) ctctATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcc > 1:359173‑M1/1‑41 (MQ=255) tctATTGTGTACGGTGGGCCTAAACGCAGGGGGCCTCCCCgcgcaaaggatttgagcggatgtatgattttgggattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgca < 2:124433‑M1/250‑211 (MQ=255) ctATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgctatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagt > 1:72639‑M1/1‑39 (MQ=255) ttgttgACGTTGGGCCTAACCGCAGGGAGACTCCCCgcgcaaaggaagtgagcggttgtatgattttgtgattattggcggcggcatcatcggcatgccgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgttatccatgccggggtctattacacgtccggcagcctgaaggcgcagttt < 1:135894‑M1/250‑215 (MQ=255) ttGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagtttt > 1:279262‑M1/1‑36 (MQ=255) gtgGGCCTAAACGGAGGGAGCCTCCCCgcgcaagggaagtgagcggatgtatgatttggggattattggcggcggcatcatcgccatggcgccccccatgcaactgattgaggtctatccggacgcccgcattgcgttgctggaaaaagtgtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgg < 2:651391‑M1/250‑225 (MQ=255) gggCCTAAACGCAGGGAGACTCCCCgcgcaacggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacctcccgcagcctgaaggcgcaggtttgcctggcggg > 1:203369‑M1/1‑25 (MQ=255) gggCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacaacggcgggatccatgccggggtctatttcacttccggccgcctgaaggcgcagtttttcctggcgggg > 2:682694‑M1/1‑25 (MQ=255) ggCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgcaccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctcttacacgtccggcagaccgcaggcggagttttgcctggcggga > 2:403171‑M1/1‑24 (MQ=255) aaaCGCAGGGAGACTCCCCgcgcaaaggaattgggcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaacc < 1:335379‑M1/249‑231 (MQ=255) aaaCGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtttgattttgtgattatgggcggcggcatcatcggcatgtctaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggtttttcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccg < 1:365143‑M1/250‑232 (MQ=255) aCGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgc > 1:111488‑M1/1‑17 (MQ=255) cGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgcc > 1:44960‑M1/1‑16 (MQ=255) gCAGGGAGACACCCCgcgcaaaggaattgagctgatgtatgattttgtgcttattggcggcggcatcatcggcatgtcgaccgccatgcaacttattgatgtctatccggacgcccgcattgcgttgctggcaaaagagtccgccccggcctgtcaccagacgggccacaacagcagcgcgatccatgccgggggctcttacacgtccggcagcctgaaggcgccgttttgcctggcggcaaaccgcgcc > 2:189339‑M1/1‑15 (MQ=255) aGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccacc > 1:22721‑M1/1‑13 (MQ=255) gggAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccacc > 1:274622‑M1/1‑12 (MQ=255) ggAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccacca > 1:501043‑M1/1‑11 (MQ=255) ggaccccccgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcaccatcggcattccgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaag < 1:310269‑M1/246‑243 (MQ=255) gaCTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcggccgccatgaaactgattgatgtctatccggacgcccggattgggttgccggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgacggggtctattacaactccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaaac > 2:403013‑M1/1‑8 (MQ=255) gaCTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggccgcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaagc > 2:703245‑M1/1‑8 (MQ=255) cccgcgaaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagtttggcctggcgggaaaccgcgccaccaaagcctttt < 2:117728‑M1/251‑249 (MQ=255) | ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGC > NC_000913/2755911‑2756406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |