| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,640,057 | Δ7,591 bp | [rrrQ]–[dicC] | 18 genes [rrrQ], [ydfR], essQ, ynfU, cspB, cspF, ynfS, ydfT, ydfU, rem, hokD, relE, relB, ydfV, flxA, ydfW, ydfX, [dicC] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1640057 | 1647647 | 7591 | 63 [0] | [1] 64 | [rrrQ]–[dicC] | [rrrQ],[ydfR],essQ,ynfU,cspB,cspF,ynfS,ydfT,ydfU,rem,hokD,relE,relB,ydfV,flxA,ydfW,ydfX,[dicC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1640056 | 0 (0.000) | 63 (0.700) | 54/492 | 0.3 | 99.2% | coding (2/534 nt) coding (310/312 nt) |
rrrQ ydfR |
putative lysozyme protein YdfR |
| ? | NC_000913 | 1647648 = | 1 (0.010) | coding (203/231 nt) | dicC | putative DNA‑binding transcriptional regulator DicC | |||||
ATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGAT‑TTTTG‑TGTTCATAGATATTTATGATGAGGACGCTCGTGCTTATTGGCAGGATTTTCAATCTTAAAGGAGTACTGATGCTGCAGATAAGACTCAACTTTTTCTGACAATTTTTCTGCTACTTCCAGGAAGACTTGCCGGACGCTCCTTCTGGCTGCTGCCTCATAAAACTCCAGCGCAGCTCCTTCAACACGGTCCATGGCGACATCCAGGTCAAAAATTTCACCGTCAAAGCGTTCTTTGTCCTGTAAGGCTACA > NC_000913/1639809‑1640300 | aTCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAc < 1:175315‑M1/250‑2 (MQ=255)aTCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAc < 1:345215‑M1/250‑2 (MQ=255) tCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAccc > 2:607778‑M1/1‑248 (MQ=255) cACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccg < 1:306035‑M1/251‑5 (MQ=255) cACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcc > 1:536189‑M1/1‑247 (MQ=255) cACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcc < 2:536189‑M1/249‑3 (MQ=255) cACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGGTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCAATTGAGTGGTTACCTACTTTTTCGTCCAGCACCTGGACAAGTATCGGAGGAGCAGATGCGCCAGAACCAATCAGCGCCAGAACGGCATCCGACAGGCCGGATCTGAT‑ATTTGATGTTCAcc > 2:257866‑M1/1‑247 (MQ=255) aCGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgc > 1:120414‑M1/1‑246 (MQ=255) gCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgccc < 2:623013‑M1/251‑8 (MQ=255) cTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccg > 1:668026‑M1/1‑243 (MQ=255) aTGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttc < 1:339521‑M1/251‑13 (MQ=255) gTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAACACGGGTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATTCGTCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGCTATTTTG‑TGTTCAcccgcccgcctagtctt > 2:515103‑M1/1‑234 (MQ=255) ccTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGTTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgat < 1:152711‑M1/251‑23 (MQ=255) tCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaacttt < 1:396461‑M1/249‑39 (MQ=255) cGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttggg > 1:9044‑M1/1‑210 (MQ=255) ggttcaTAATGGGACAAACGGATTTTCCCTCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTAACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAAAGGCAGCCGACAGGCGGTATCTGATATTTTG‑TGTTCAcccgcccgcttcgtctaacgatcttcatcttcacctttgggctca > 2:698100‑M1/3‑205 (MQ=255) gTTTCATATTGGGAAAAACGGTTTTTCCATCCCCCACTGTGGCTCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCGGAGAAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCATCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcat < 2:386336‑M1/251‑47 (MQ=255) ttCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcata < 1:397173‑M1/250‑48 (MQ=255) atTGGGAAAAACGGTTTTTCCATCCACCCCTGTGGAACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCAATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGGATCTGAGGAGCAGATGCGCAAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGAATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactga > 2:176370‑M1/1‑198 (MQ=255) atTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactga > 1:199584‑M1/1‑198 (MQ=255) atTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactga > 1:626281‑M1/1‑198 (MQ=255) tGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagct > 1:150811‑M1/1‑196 (MQ=255) gggAAAAACTGTTTTTCCATCCCCCACTGTGGCACCCCGACATGTGTTCCATATGCCAGATCCATCGCGTTATGCTATTGTGTGGTCACCTGCTTTTTCGTCCAAAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACTGCAGCCGTCAGGCTGTATCTGATCTTTTG‑TGTTCAcccgcccgctgcgtctgacgatattcatcataaactttgtgatcatactgaagct < 2:549087‑M1/250‑56 (MQ=255) aaaaCGGTTTTTCCATCCCCCACTGTGGCCCCCCGCCAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataacctttgggatcatactgaagctccccg < 1:131985‑M1/251‑61 (MQ=255) ggTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTTCCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCAGATCTTTTG‑TGTTCAccc < 2:595687‑M1/189‑4 (MQ=255) ggTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAccc > 1:595687‑M1/1‑186 (MQ=255) atccaCCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaatctccccgccagatgcctcctt > 2:133488‑M1/1‑177 (MQ=255) atccaCCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctg > 1:166730‑M1/1‑177 (MQ=255) ccaccaCTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgt > 1:269613‑M1/1‑175 (MQ=255) ccccctgtgGCACCCCGACAGATGGTCCATATGCCAGACCCATCGCGGTATGCCATGGTGTGGTTACCTTCTTTTTCGTCCAGAAACGGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtaga < 2:539713‑M1/247‑79 (MQ=255) accacTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgt > 2:271526‑M1/1‑173 (MQ=255) acTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactnaagctccccgccagatgcctcctgtagacgc > 2:357172‑M1/1‑170 (MQ=255) ggtggCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCAATTGTGGGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAAGCAGCGCAAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcat < 2:405413‑M1/250‑84 (MQ=255) gtgGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatc > 2:204629‑M1/1‑167 (MQ=255) ccGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgacc > 1:67130‑M1/1‑159 (MQ=255) gACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgacctt < 1:696923‑M1/251‑95 (MQ=255) gATGGTCCATATGCCATAACCATCGCGTTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAATTATCTGAGGATCAGATGCGCCAGCCCCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcggg < 2:567446‑M1/251‑99 (MQ=255) gTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTCCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCTCCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑CGTTCAcccgcccgcttcgtcttacgatattcatcataaactgtgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaact < 1:406426‑M1/251‑103 (MQ=255) atGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatc < 1:102663‑M1/250‑108 (MQ=255) aTCGGGGTTTGCCATTGTGTGGTTACCTTCTTTTTCGTCCATAACCTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCCCCAATCAGCGCCAGACCGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagct < 1:571543‑M1/251‑120 (MQ=255) gcgGTATGCCATTGTGGTTTTACCTTCTTTTGCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGTCAGCACCAACCATCGCCAGAACGGCAGCCTTCAGGCCGTATCTGATCTTTTG‑TTTTCGcccgcccgcttcgtcttacgatattcatcataaactttgggatcattctgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccatctata < 1:206690‑M1/251‑123 (MQ=255) gTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcctcgcgcgaccttcgggaactacatagtaagccaatcgtggcgc > 2:658363‑M1/1‑126 (MQ=255) aTGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatcctgacgctccccg > 2:288711‑M1/1‑124 (MQ=255) aTGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcg > 1:46627‑M1/1‑124 (MQ=255) aTGCCATTGTGTGGTTACCTTCGTTTTCGGCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctacccg < 1:288711‑M1/184‑61 (MQ=255) tACCTTCTTTTTCGTCCCGAAACTGGTCCAGTATCTGAGGAGCAGATGCGCCAGCACCACTCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCCcccgcccgcttcgtcttacgatattcatcatacactttgggatcatactgaagctccccgccagatgcctcctgtagccgcatcgctcgaccttcggacgctaaatcccctttccagctctaaagcgaagccacacgaatac > 2:29659‑M1/1‑109 (MQ=255) tcttTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑CGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgactcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttcccgctataaagcgaagccaaacgaatacctgcc > 2:2520‑M1/1‑104 (MQ=255) ccAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgca > 1:282532‑M1/1‑94 (MQ=255) aaaCTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgctattcatcataaactttgggataatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcacgttt > 2:452533‑M1/1‑90 (MQ=255) aaaCGGGTCAAGTATCTTAGGAGCAGTTCCGCCAGCCCCAACCAGCTCCGGAACGGCAGCCGACAGGCCGTATTTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttt < 2:97233‑M1/251‑162 (MQ=255) gtgcaagTACCTGAGGAGCAGAGGCGCCACCACCAATCAGCGCCAGAACGGCAGCCGACAGTCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgttt < 2:548497‑M1/248‑167 (MQ=255) cAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgttttt < 1:607778‑M1/250‑169 (MQ=255) aggagCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaat > 1:439836‑M1/1‑72 (MQ=255) cAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaa < 1:163958‑M1/251‑185 (MQ=255) aGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaa > 1:166207‑M1/1‑66 (MQ=255) gcCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaa < 1:366328‑M1/251‑208 (MQ=255) accggCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgctgcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacac < 1:701368‑M1/249‑213 (MQ=255) ggcggccaacaggccgtATCTGATCTGTTG‑TTTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctt < 2:626281‑M1/243‑216 (MQ=255) ggCAGCCGACAGGCCGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctt > 1:443752‑M1/1‑36 (MQ=255) cgcaagtccgtatctgATCTTTTG‑TGTTCAcccgcccgcttcttcttacgatattcatcataaactttgggatcatactaaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaagcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgt < 2:199584‑M1/244‑222 (MQ=255) ccGTATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtcat > 1:558375‑M1/1‑23 (MQ=255) tATCTGATCTTTTG‑TGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtcataac > 1:687586‑M1/1‑20 (MQ=255) g‑tgtTCAcccgcccgctgcgtcttacgatagtcatcataaactttgggatcatacggaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattgttagtcataactaacaagatagat < 2:301290‑M1/251‑245 (MQ=255) | ATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGAT‑TTTTG‑TGTTCATAGATATTTATGATGAGGACGCTCGTGCTTATTGGCAGGATTTTCAATCTTAAAGGAGTACTGATGCTGCAGATAAGACTCAACTTTTTCTGACAATTTTTCTGCTACTTCCAGGAAGACTTGCCGGACGCTCCTTCTGGCTGCTGCCTCATAAAACTCCAGCGCAGCTCCTTCAACACGGTCCATGGCGACATCCAGGTCAAAAATTTCACCGTCAAAGCGTTCTTTGTCCTGTAAGGCTACA > NC_000913/1639809‑1640300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |