Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 832,467 Δ15,538 bp ybiA[glnH] 16 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 832467 848004 15538 69 [0] [0] 69 ybiA–[glnH] ybiA,dinG,ybiB,hcxB,zbiJ,ybiE,ybiJ,ybiI,ybiX,fiu,mcbA,rlmF,ybiO,glnQ,glnP,[glnH]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 8324660 (0.000)69 (0.770) 62/492 0.2 100% intergenic (+230/+2) rhlE/ybiA ATP‑dependent RNA helicase RhlE/N‑glycosidase YbiA
?NC_000913 848005 = 0 (0.000)intergenic (‑1/+403) glnH/dps L‑glutamine ABC transporter periplasmic binding protein/DNA protection during starvation protein

CGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGATTGT  >  NC_000913/847755‑848252
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                       
aacctgccgctgcgcagtaatcttttatgccgggctatgcccggcatcaggctgatgaacaaacgcaaaactgcctgatgcgctacgcttatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagaca                                                                                                                                                                                                                                                         <  1:294076‑M2/1‑1 (MQ=255)
  cctgccgttgcgcagtaaacttttatgccgggctatgcccggcatcaggctgatgaacaaacgcaaaactgcctgctgcgctactcttatcaggcctacgtgaactctgcaatgtattgaatttgcatgcttttgtagttcggataagccgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaccatgggaaaaaatttatctgatttacagcccataagccaccgcgacAGc                                                                                                                                                                                                                                                       >  2:603846‑M2/249‑251 (MQ=255)
     gccgctgcgcagtaatcttttatgccgggctatgcccggcatcaggctgatgaacaaacgcaaaactgcctgatgcgctacgcttatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCAtt                                                                                                                                                                                                                                                    >  2:37222‑M2/246‑251 (MQ=255)
       cgctgcgcagtaatcttttatgccgggctatgcccggcatcaggctgatgaacaaacgcaaaactgcctgctgcgctacgcttatcaggcctacgtgaaatctgcaatatattgcatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcgcaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttntaccgcccatacgccaccgagacAGCATTTc                                                                                                                                                                                                                                                  >  2:327858‑M2/244‑251 (MQ=255)
         ctgcgcagtaatcttttaagccgggctatgcccggcatcaggctgatgaacaaacgcaaaactgcctgatgcgctacgcttatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgcgacAGCATTTCCt                                                                                                                                                                                                                                                >  2:606669‑M2/242‑251 (MQ=255)
             gcagtaatcttttatgccgggctatgcccggcatcaggctgatgaacaaacgcaaaactgcctgatgcgctacgcttatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCttttt                                                                                                                                                                                                                                            <  2:544478‑M2/14‑1 (MQ=255)
                              cgggctatgcccggcatcaggctgatgaacaaacgcaaaactgcctgatgcgctacgcttatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGAt                                                                                                                                                                                                                           <  1:238770‑M2/31‑1 (MQ=255)
                                               caggctgatgaacaaacgcaaaactgcctgatgcgctacgcttatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTc                                                                                                                                                                                                           <  1:432979‑M2/47‑1 (MQ=255)
                                                               cgcaaaactgcctgatgcgctacgcttatcaggcctacgtgaactctggaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacactggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGTACGATCCCCTGCGGGACATTCACATATATGAAAAAATc                                                                                                                                                                                          <  1:637480‑M2/64‑1 (MQ=255)
                                                                 caaaactgcctgatgcgctacgcttatcaggccttcgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGt                                                                                                                                                                                        <  2:412753‑M2/66‑1 (MQ=255)
                                                                         cctgatgcgctacgcttatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGttt                                                                                                                                                                                >  1:90869‑M2/178‑251 (MQ=255)
                                                                          ctgatgcgctacgcttatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacaagggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTTCCAGtttt                                                                                                                                                                               >  2:234329‑M2/177‑251 (MQ=255)
                                                                            gatgcgctacgcttatcaggcctatgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAACAATCGTGCCAGTTTTGc                                                                                                                                                                             >  2:296196‑M2/175‑251 (MQ=255)
                                                                             atgcgctacgcttatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGc                                                                                                                                                                             >  1:722560‑M2/174‑250 (MQ=255)
                                                                                               gcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCg                                                                                                                                                            >  1:563155‑M2/156‑249 (MQ=255)
                                                                                                       gaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCACCTCCTTGATTTTTCGAGATGCGGc                                                                                                                                                   >  2:236831‑M2/148‑250 (MQ=255)
                                                                                                       gaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGc                                                                                                                                                   >  2:133647‑M2/148‑250 (MQ=255)
                                                                                                         actctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCaa                                                                                                                                                 >  1:357142‑M2/146‑250 (MQ=255)
                                                                                                            ctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAAc                                                                                                                                             >  1:288731‑M2/143‑251 (MQ=255)
                                                                                                             tgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACg                                                                                                                                            >  1:390573‑M2/142‑251 (MQ=255)
                                                                                                                   atattgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaaccagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGCCGATCCCCTGCGCGACCTTCACATATATGACAAAATCGTGCCAACTTTCCACCTCCTNGCTTTTTCGAGATGCGGCAAAAACGTGATGc                                                                                                                                      >  2:338153‑M2/136‑251 (MQ=255)
                                                                                                                     attgaatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCAc                                                                                                                                    <  1:374449‑M2/118‑1 (MQ=255)
                                                                                                                         cccgagcacagaaccgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGAtt                                                                                                                                <  1:25014‑M2/122‑1 (MQ=255)
                                                                                                                         aatttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgataacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACTGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGAtt                                                                                                                                <  1:207990‑M2/122‑1 (MQ=255)
                                                                                                                          atttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGAttt                                                                                                                               <  1:74016‑M2/123‑1 (MQ=255)
                                                                                                                            ttgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTta                                                                                                                              <  1:37222‑M2/124‑1 (MQ=255)
                                                                                                                             tgcatgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTtat                                                                                                                             <  1:472170‑M2/125‑1 (MQ=255)
                                                                                                                                atgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacacgcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGc                                                                                                                                                      >  2:675150‑M2/123‑222 (MQ=255)
                                                                                                                                atgcttttgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGc                                                                                                                                                      <  1:675150‑M2/100‑1 (MQ=255)
                                                                                                                                       tgtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaagttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATAc                                                                                                                   <  1:327858‑M2/135‑1 (MQ=255)
                                                                                                                                        gtaggccggataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATAccc                                                                                                                 <  1:37140‑M2/137‑1 (MQ=255)
                                                                                                                                          aggccggttaaggcgtttacgccgcatacggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaactttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTg                                                                                                               >  2:48350‑M2/113‑251 (MQ=255)
                                                                                                                                                gataaggagtgtacggcgcatccggcaattcacaacaagcacttgtaagcaatttgagaacacgggaaaaaatttatctgttgtcccgcccataagccaccgagacAGCATTTCCTTTTGTCTATCCACGGGACGATCCCCTGCGGGACATTCACATATATGAAAAAATCGTGCCAGGTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATGACCTGAAGATg                                                                                                         <  2:208247‑M2/145‑1 (MQ=255)
                                                                                                                                                 ataaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGCCATTCACATATATGAAAAAATCGTGCCAGTTTTGCATCTCCTTGATTTTTCGAGATGCTGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGc                                                                                                        >  2:521001‑M2/106‑251 (MQ=255)
                                                                                                                                                   aaggcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCa                                                                                                       <  1:49551‑M2/147‑1 (MQ=255)
                                                                                                                                                      gcgtttacgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCAt                                                                                                   <  1:236831‑M2/151‑1 (MQ=255)
                                                                                                                                                            acgccgcatccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTggg                                                                                             >  1:237837‑M2/95‑251 (MQ=255)
                                                                                                                                                                  catccggcatttcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCa                                                                                       <  1:278321‑M2/163‑1 (MQ=255)
                                                                                                                                                                         catttcacaacaagcacttgtcagcaatttgagaacacgggacacaatttatctgttttacctcccataagcaaccgcgacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCACAAACGTGATGCCCGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGt                                                                                >  1:425861‑M2/82‑251 (MQ=255)
                                                                                                                                                                             tcacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTgcgc                                                                            >  1:20334‑M2/78‑251 (MQ=255)
                                                                                                                                                                              cacaacaagcacttgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCt                                                                           <  1:296196‑M2/175‑1 (MQ=255)
                                                                                                                                                                                           tgtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCAc                                                               <  1:94073‑M2/187‑1 (MQ=255)
                                                                                                                                                                                            gtcagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTc                                                             <  1:557729‑M2/189‑1 (MQ=255)
                                                                                                                                                                                              cagcaatttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCaa                                                           <  1:379514‑M2/191‑1 (MQ=255)
                                                                                                                                                                                                     ttgagaacacgggaaaaaatttatctgttttaccgcccataagccaccgcgacTGCATTTCCTTTTTTCTATCCACGGGACGACCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAAATCCTTGATTTTTCGAGATGCGTCAAAAACGTGATGCCCGATTTATAGGGCAATACTCTGCAGATTCACCATTCTGGGGCACCAATCTGGTACGCTCACATTGTGCACTCAACACAGTg                                                    >  2:81054‑M2/54‑251 (MQ=255)
                                                                                                                                                                                                        agaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGatt                                                 >  1:29621‑M2/51‑251 (MQ=255)
                                                                                                                                                                                                        agaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGatt                                                 <  1:338153‑M2/201‑1 (MQ=255)
                                                                                                                                                                                                        agaacacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGatt                                                 <  1:346106‑M2/201‑1 (MQ=255)
                                                                                                                                                                                                            cacgggaaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGCGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTAttt                                             <  1:395849‑M2/205‑1 (MQ=255)
                                                                                                                                                                                                                  aaaaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTAGCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAAGTGTGCACTCAACACAGTGATTATTTAGCGTa                                       <  2:651483‑M2/211‑1 (MQ=255)
                                                                                                                                                                                                                   aaaaatttatctgttttaccgcccataagccaccgatacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATTAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCTGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGTGCTCCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTTATTATTTAGCGTaa                                      <  1:106583‑M2/212‑1 (MQ=255)
                                                                                                                                                                                                                    aaaatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTaa                                      >  1:521796‑M2/39‑250 (MQ=255)
                                                                                                                                                                                                                      aatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGACAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGAAAACACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAACATTGTGCACTCAACAAAGTGATTATTTAGCGTAAAAc                                   >  2:307133‑M2/37‑251 (MQ=255)
                                                                                                                                                                                                                      aatttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAAc                                   <  1:652509‑M2/215‑1 (MQ=255)
                                                                                                                                                                                                                       atttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAAcc                                  >  2:301185‑M2/36‑251 (MQ=255)
                                                                                                                                                                                                                       atttatctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCAAGGGACGATCCCCTGCGTGACATTCCCATATATGAAAAAATCGTGCCAGTTTTGCCACTCATTGATTTTTAGAGATGCGGCAAAAAAGTGATGCACGATTTATAGGACAATACCCTGAAGAAGCACCATTCTGGGGCACCAATCTGGTTCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGGAAAAcc                                  >  2:716643‑M2/36‑251 (MQ=255)
                                                                                                                                                                                                                            tctgttttaccgcccataagccaccgagacAGCATTTCCTTTTTTCTAACCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCtgat                              <  2:722560‑M2/220‑1 (MQ=255)
                                                                                                                                                                                                                                   taccgcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGaaaaaa                       <  1:702398‑M2/227‑1 (MQ=255)
                                                                                                                                                                                                                                       gcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGAttt                                                                                                                               >  2:6762‑M2/20‑142 (MQ=255)
                                                                                                                                                                                                                                       gcccataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGAttt                                                                                                                               <  1:6762‑M2/123‑1 (MQ=255)
                                                                                                                                                                                                                                          cataagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGATATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCTCCAATCTGGTGCGCTAAAATTGTGCACTCAACTCAGTGATTATTTAGCGTAAAACCTGATGAAAAACCAATCttt               <  2:483036‑M2/235‑1 (MQ=255)
                                                                                                                                                                                                                                          cagaagctcccgagacAGCATTTCCGTTTTTCTATCCTCGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTGGCAACTCTTTGATTTTTCGAGATGCGTCAAAAACGTGCTGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCCATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATGATTTCGCGTAAAACCTATTTAAAAAACaatcatt               <  2:550090‑M2/235‑4 (MQ=255)
                                                                                                                                                                                                                                            taagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTAt             >  1:543645‑M2/15‑251 (MQ=255)
                                                                                                                                                                                                                                             aggccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATg            <  2:454786‑M2/238‑1 (MQ=255)
                                                                                                                                                                                                                                             aagccaccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATg            >  2:144623‑M2/14‑251 (MQ=255)
                                                                                                                                                                                                                                                 caccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAAc        >  1:110003‑M2/10‑251 (MQ=255)
                                                                                                                                                                                                                                                 caccgagacAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAAc        <  1:391776‑M2/242‑1 (MQ=255)
                                                                                                                                                                                                                                                 caccgagacAGCATTTCCGTTTTTCTAACCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCTAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAAc        <  2:154518‑M2/242‑1 (MQ=255)
                                                                                                                                                                                                                                                       gacAGCATTTCCTTTTTTCTAACCACGGGACGAACCCCGGCGCGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTACTTGATTTTTCGAGATGCGGCAAAACCGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAATATTGTGCCCTCAACACAGTGTTTATTTAGCGTAAAAACTGATGAAAAAACAATCTTTATGTAAAGATtgt  >  2:692610‑M2/4‑251 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                       
CGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGATTGT  >  NC_000913/847755‑848252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.