Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,518,434 Δ81,761 bp [ykiE]yjjA 74 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4518434 4600194 81761 66 [0] [2] 68 [ykiE]–yjjA [ykiE],insA7,yjhU,yjhF,yjhG,yjhH,yjhI,sgcR,sgcE,sgcA,ryjB,sgcQ,sgcC,sgcB,sgcX,yjhP,yjhQ,topAI,ythB,nanS,nanM,nanC,fimB,fimE,fimA,fimI,fimC,fimD,fimF,fimG,fimH,gntP,uxuA,uxuB,uxuR,yjiC,ytiC,ytiD,idlP,iraD,hypT,iadA,yjiG,yjiH,kptA,yjiJ,yjiK,ytiA,yjiL,yjiM,yjiN,mdtM,ytiE,yjiR,yjiS,yjiT,mcrC,mcrB,mcrB,symE,symR,hsdS,hsdM,hsdR,mrr,yjiA,yjiX,btsT,tsr,lgoT,lgoR,lgoD,opgB,yjjA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 45184330 (0.000)66 (0.740) 58/488 0.2 100% coding (62/69 nt) ykiE protein YkiE
?NC_000913 4600195 = 0 (0.000)intergenic (‑6/+43) yjjA/dnaC DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC

ATAAAGCGACTCGAACGTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTATAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTATTATTGACATCCTCACTGCCCTAAAGGATGGGGATTTCGGTAATGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCCTTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCC  >  NC_000913/4518185‑4518675
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                  
aTAAAGCGACTCGAACGTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTAct                                                                                                                                                                                                                                                  >  1:414147‑M1/1‑249 (MQ=255)
    aGCGACTCGAACGTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGGATAAAATGGGATGGAGCCTCTGCTTCTGGCATGGGTCGGTCCGAAGGACTCATGATGTGGTCTGCTActca                                                                                                                                                                                                                                                >  2:64050‑M1/1‑245 (MQ=255)
       gACTCGAACGTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtg                                                                                                                                                                                                                                           >  1:213466‑M1/1‑242 (MQ=255)
             aaCGTTAAGGAAGCTGTGGTAGTGGCGCGGTCCGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTAGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggaggaattg                                                                                                                                                                                                                                     >  2:701885‑M1/1‑236 (MQ=255)
                gTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgt                                                                                                                                                                                                                                  >  1:662823‑M1/1‑233 (MQ=255)
                        aGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGGTGTGGTCTGCTActcaaggtggaattgtgtcgcagtat                                                                                                                                                                                                                          <  2:587691‑M1/251‑27 (MQ=255)
                         gCTGTGGTAGTGGCGCGGGCAGACATGCGGAGTTCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACAGGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgggtcgcagtata                                                                                                                                                                                                                         <  2:711595‑M1/251‑28 (MQ=255)
                            gtgGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTTAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtatac                                                                                                                                                                                                                        <  2:376954‑M1/249‑29 (MQ=255)
                            gtgGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGATGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtatacc                                                                                                                                                                                                                       <  1:470875‑M1/250‑30 (MQ=255)
                            gtgGTAGTGGCGCGGTCAAACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtatac                                                                                                                                                                                                                        <  2:163925‑M1/249‑29 (MQ=255)
                                   tGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaa                                                                                                                                                                                                                >  1:715625‑M1/1‑214 (MQ=255)
                                                    cGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctt                                                                                                                                                                                              >  1:250303‑M1/1‑197 (MQ=255)
                                                     ggAGTGAATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTTCAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGGAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggttgaattgggtcgcagtataccgccagaaacggggattaatactcttt                                                                                                                                                                                             <  2:77939‑M1/251‑56 (MQ=255)
                                                                 aagataattATCAAGTAGTCATAATAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcacggtggaattgtgtcgcagtataccgccagaaacggggataaatgctctttacctgttacccg                                                                                                                                                                                 >  2:383000‑M1/5‑184 (MQ=255)
                                                                    ttAATTATCACGTAGTCACATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgaagtataccgccagaaacggggattaatactctttacctgttacccggct                                                                                                                                                                              >  2:598081‑M1/1‑181 (MQ=255)
                                                                          ctcACGTAGTCAGATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTATAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacgggtattaatactctttacctgttacccggctacggt                                                                                                                                                                         >  2:707354‑M1/2‑175 (MQ=255)
                                                                          aTCACGTAGTCATATTAATATGAGAATGGTNATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGCGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggt                                                                                                                                                                         <  2:339629‑M1/250‑76 (MQ=255)
                                                                            cACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagacacggggattaatactctttacctgttacccggctacggtagc                                                                                                                                                                      >  2:229395‑M1/1‑173 (MQ=255)
                                                                              cGTAGTCATATTAATATGAGAATGGAAATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagcaacggggattaatactctttacctgttacccggctacggtatct                                                                                                                                                                     >  1:195019‑M1/1‑171 (MQ=255)
                                                                               gTAGTCATATTAATATGAGAATGGTTATCATTAAAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCAActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttaccaggctacggtagctat                                                                                                                                                                   >  1:490296‑M1/1‑170 (MQ=255)
                                                                                 aGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAAAATGTTGTTTTTCTAAGTGTTGTAAGGAAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtctaccgccagaaacggggattaatcctntttacctgttacccggctacggtagctatcc                                                                                                                                                                 >  2:332719‑M1/1‑168 (MQ=255)
                                                                                     atatTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagt                                                                                                                                                             >  2:506730‑M1/1‑164 (MQ=255)
                                                                                       atTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttg                                                                                                                                                           >  1:317786‑M1/1‑162 (MQ=255)
                                                                                       atTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagtt                                                                                                                                                            <  2:96331‑M1/250‑89 (MQ=255)
                                                                                           atatGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTACGGTAGGTATAAAATGGGATGATGCCTCTGCTTCTGGCATGTGTCGGTCAGCATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtctaccgccagaaacggggattaatactctttacctgttacccggcgacggtagctatcccagttgaagt                                                                                                                                                       >  2:169514‑M1/1‑158 (MQ=255)
                                                                                              tGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatc                                                                                                                                                     >  1:46226‑M1/1‑155 (MQ=255)
                                                                                                agaATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacc                                                                                                                                                  <  1:588422‑M1/251‑99 (MQ=255)
                                                                                                     ggTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccaca                                                                                                                                              <  1:601254‑M1/250‑103 (MQ=255)
                                                                                                        tATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTACGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgagtcgcagtataccgccagaaacggggattaatacactttacctgttacccggctacggtagctatcccagttgaagataacccccaaact                                                                                                                                          >  1:426895‑M1/1‑145 (MQ=255)
                                                                                                        tATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaact                                                                                                                                          >  2:104425‑M1/1‑145 (MQ=255)
                                                                                                        tATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaact                                                                                                                                          >  1:255247‑M1/1‑145 (MQ=255)
                                                                                                         aTCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTATGGTAGGCATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggcggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatccc                                                                                                                                                                >  1:307317‑M1/1‑144 (MQ=255)
                                                                                                         aTCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTATTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtagaccgccagaaacggggattaatactctttacctgttaccctgctacggtagctatccc                                                                                                                                                                <  2:307317‑M1/228‑85 (MQ=255)
                                                                                                           cATTACAATTGGAAATAAAATTGTTTACCCTAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGAATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaagggggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagctaacccacaaactgtt                                                                                                                                       >  1:566779‑M1/1‑142 (MQ=255)
                                                                                                            aTTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgtt                                                                                                                                       >  1:677760‑M1/1‑141 (MQ=255)
                                                                                                                cAATTGGAAATAAAATTGTTTCCAATAGACATTCTTAACATGTTGTTTTTCTAAGTGTTGTCAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCCTGTGTCGGACAGAATGACTCATGATGTGGTCTGCTCctcaaggtggaattgtgtcgcagtataccgccagaaacggggattaataatctttacctgatacccggctacggtagctatcacagttgcagatcacccacaaactgttacca                                                                                                                                   >  2:608724‑M1/1‑137 (MQ=255)
                                                                                                                        aaTAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcat                                                                                                                           >  1:301456‑M1/1‑129 (MQ=255)
                                                                                                                           caaatTGTTTCCAATAGACATTTTTACCATGTTGTTTTTCTCAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActccaggtggaattgtgtcgcagtatacagccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggctcatacgg                                                                                                                       >  2:306804‑M1/2‑126 (MQ=255)
                                                                                                                              aTTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtcc                                                                                                                    <  1:395787‑M1/251‑129 (MQ=255)
                                                                                                                                   ttCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcatggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcac                                                                                                               >  2:235336‑M1/1‑118 (MQ=255)
                                                                                                                                          aGACATTTTTAACATGTTGTTTTTCTCAGTGTTGTAAGGTAGGTATAAAAAGGGATGGAGCCTCTGCTTCTGGAATGTGTCGGTCAGAATGACTCATGCTGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaaatgttacccaggcgcatacggtccatcacgcgttcg                                                                                                        >  2:99823‑M1/1‑111 (MQ=255)
                                                                                                                                             cATTTTTAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgccc                                                                                                     <  1:525053‑M1/251‑144 (MQ=255)
                                                                                                                                                  ttAACATGTTGTTTTTCTAAGTGTTGTAAGGTAGGGATAAAATGGAATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaagggggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccccaaactgttacccaggcgcatacggtccatcacgcggtcgcccagca                                                                                                 >  2:445092‑M1/1‑103 (MQ=255)
                                                                                                                                                      cATGTTGTTTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttg                                                                                            <  2:414147‑M1/251‑153 (MQ=255)
                                                                                                                                                            gttTTTCTAAGTGTTGTAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatc                                                                                      >  1:18451‑M1/1‑93 (MQ=255)
                                                                                                                                                                           gtaaGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactg                                                                       >  1:48311‑M1/2‑78 (MQ=255)
                                                                                                                                                                           gtaaGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactg                                                                       <  1:701885‑M1/250‑174 (MQ=255)
                                                                                                                                                                              aggtaggtATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttg                                                                    <  1:487743‑M1/251‑177 (MQ=255)
                                                                                                                                                                              aggtaggtATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttg                                                                    >  1:201879‑M1/1‑75 (MQ=255)
                                                                                                                                                                                       taAAATGGGATGGAGCATCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtagcagtataccgccagaaacggggattaatactatttacctgttacccggctacggtcgctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgccccgcaacttggtcatctcttccatattactgttggtcagcatc                                                           >  2:255455‑M1/1‑66 (MQ=255)
                                                                                                                                                                                         aaaTGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatccc                                                         >  1:207627‑M1/1‑64 (MQ=255)
                                                                                                                                                                                          aaTGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggcattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccg                                                        >  2:228002‑M1/1‑63 (MQ=255)
                                                                                                                                                                                           aTGGGATGGAGCCTCTGCTTCTGGCCTGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccgg                                                       >  1:255448‑M1/1‑62 (MQ=255)
                                                                                                                                                                                             gggATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggtt                                                     >  1:656704‑M1/1‑60 (MQ=255)
                                                                                                                                                                                                                  gCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttagaagaagagcgg                                <  2:213466‑M1/251‑213 (MQ=255)
                                                                                                                                                                                                                      gttgcggtcAGAATGACTCATGATGTGGTCNGCTAatcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctctgccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcga                             <  2:317786‑M1/246‑216 (MQ=255)
                                                                                                                                                                                                                      gggtcgGTCAGAATGTCTCATGATGTGGTCTGCTActcatggttgaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaatatcacccacaaactgttacccaggcgcatacggtccatctcgcgttcgcccagcaacttggtcatctcttccaaattactggtgttcagcatcccggttgggcgtttggaagaagagcggcgat                            <  2:139914‑M1/249‑217 (MQ=255)
                                                                                                                                                                                                                           ggTCAGAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacg                       >  1:436641‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                                                gAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctg                  >  1:260262‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                                                gAATGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggt                                                      <  1:63641‑M1/215‑191 (MQ=255)
                                                                                                                                                                                                                                 aaTGACTTAGGATGTGGTCGGCTActcaaggtggaattgtgtcgctgtataacgccagaaacggggattaatactctgtacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccagacgcatacggtccatcacgcgttcgcccagcaacttggtcctctcttccataatactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctgg                 <  2:233984‑M1/251‑228 (MQ=255)
                                                                                                                                                                                                                                   tGACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggtt               >  2:567165‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                                    gACTCATGATGTTGTCTGCTActcaagttggaattggttcgcagtataccgccagaaacggggattaatacttttttcctgttaccctgctacggtagctatcccagttgatgatcccccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaactttgtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagatcggcgatcgacgatctggttg              <  2:637557‑M1/251‑231 (MQ=255)
                                                                                                                                                                                                                                    gACTCATGATGTGGTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggtt               <  1:707383‑M1/250‑230 (MQ=255)
                                                                                                                                                                                                                                                ggTCTGCTActcaaggtggaattgtgtcgcagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttt  <  1:491314‑M1/251‑243 (MQ=255)
                                                                                                                                                                                                                                                 gTCTGCTActcaaggtggaattgtgtctcagtataccgccagaaacggggattaatactcttttcctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtacatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctgtttgatgatcactttt  <  1:453246‑M1/250‑243 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                  
ATAAAGCGACTCGAACGTTAAGGAAGCTGTGGTAGTGGCGCGGTCAGACATGCGGAGTGCATCAAAAGTTAATTATCACGTAGTCATATTAATATGAGAATGGTTATCATTACAATTGGAAATAAAATTGTTTCCAATAGACATTTTTAACATGTTGTTTTTCTAAGTGTTATAAGGTAGGTATAAAATGGGATGGAGCCTCTGCTTCTGGCATGTGTCGGTCAGAATGACTCATGATGTGGTCTGCTATTATTGACATCCTCACTGCCCTAAAGGATGGGGATTTCGGTAATGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCCTTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCC  >  NC_000913/4518185‑4518675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.